RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 SH3BP2P78314 561 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 SLC10A2Q12908 348 aaPredicted RBP6.08□□□□□ -1.44
UPF2-201ENST00000356352 BRICD5Q6PL45 260 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 CPOQ8IVL8 374 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 MCATQ8IVS2 390 aaKnown RBP6.08□□□□□ -1.44
UPF2-201ENST00000356352 ZFP41Q8N8Y5 198 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 LMO3Q8TAP4 145 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 RSPRY1Q96DX4 576 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 COG8Q96MW5 612 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 UBL7Q96S82 380 aaPredicted RBP6.08□□□□□ -1.44
UPF2-201ENST00000356352 CLSTN3Q9BQT9 956 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 HIF1ANQ9NWT6 349 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 ZNF443Q9Y2A4 671 aaPredicted RBP6.08□□□□□ -1.44
UPF2-201ENST00000356352 ANTXRLA6NF34 631 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 CEBPZOSA8MTT3 80 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 SDC3O75056 442 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 RAB40ALP0C0E4 278 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 ZNF865P0CJ78 1059 aaPredicted RBP6.08□□□□□ -1.44
UPF2-201ENST00000356352 ABOP16442 354 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 KITLGP21583 273 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 IL4RP24394 825 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 IL3RAP26951 378 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 AQP2P41181 271 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 MAGEA6P43360 314 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 RPS26P11Q5JNZ5 115 aaPredicted RBP6.08□□□□□ -1.44
UPF2-201ENST00000356352 SLC35F3Q8IY50 421 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 NAGSQ8N159 534 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 PRR18Q8N4B5 295 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 SUMF2Q8NBJ7 301 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 OR5AR1Q8NGP9 310 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 TERB2Q8NHR7 220 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 CD200R1Q8TD46 325 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 DEDD2Q8WXF8 326 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 RAB40AQ8WXH6 277 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 MYLIPQ8WY64 445 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 DTD2Q96FN9 168 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 TCTN2Q96GX1 697 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 NKX3-1Q99801 234 aaPredicted RBP6.08□□□□□ -1.44
UPF2-201ENST00000356352 NTMT1Q9BV86 223 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 PBX4Q9BYU1 374 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 SYNPO2LQ9H987 977 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 BIN3Q9NQY0 253 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 SDR39U1Q9NRG7 319 aaPredicted RBP6.08□□□□□ -1.44
UPF2-201ENST00000356352 SERTAD4Q9NUC0 356 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 GPATCH2Q9NW75 528 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 NLKQ9UBE8 527 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 CPNE7Q9UBL6 633 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 STEAP1Q9UHE8 339 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 GPR52Q9Y2T5 361 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 NSG1A0A0A6YYJ2 146 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 TRBV11-1A0A0K0K1C0 115 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 TMEM189-UBE2V1I3L0A0 370 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 K7ERQ8 282 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 DVL2O14641 736 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 FANCGO15287 622 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 RFPL3O75679 317 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 UPK1BO75841 260 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 CD6P30203 668 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 AHRP35869 848 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 F2RL1P55085 397 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 SRPXP78539 464 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 HNRNPA1L2Q32P51 320 aaKnown RBP6.07□□□□□ -1.44
UPF2-201ENST00000356352 FAM182AQ5T1J6 154 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 HTR3DQ70Z44 454 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 MEPCEQ7L2J0 689 aaKnown RBP6.07□□□□□ -1.44
UPF2-201ENST00000356352 ZNF765Q7L2R6 523 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 HMGN2P46Q86SG4 172 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 ZNF595Q8IYB9 648 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 OR52R1Q8NGF1 315 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 TMEM163Q8TC26 289 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 ACOT11Q8WXI4 607 aaPredicted RBP6.07□□□□□ -1.44
UPF2-201ENST00000356352 PRR11Q96HE9 360 aaPredicted RBP6.07□□□□□ -1.44
UPF2-201ENST00000356352 CMSS1Q9BQ75 279 aaKnown RBP6.07□□□□□ -1.44
UPF2-201ENST00000356352 NMNAT2Q9BZQ4 307 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 SLC6A20Q9NP91 592 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 OBP2BQ9NPH6 170 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 UBQLN4Q9NRR5 601 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 NXT1Q9UKK6 140 aaKnown RBP6.07□□□□□ -1.44
UPF2-201ENST00000356352 LHX6Q9UPM6 363 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 RHBDD3Q9Y3P4 386 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 PTGDR2Q9Y5Y4 395 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 V9GY05 133 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 IGKV6-21A0A0C4DH24 114 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 KDM4FA0A1W2PPD8 638 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 LRP5LA4QPB2 252 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 SGK494L7N484 410 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 ARNTLO00327 626 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 MED6O75586 246 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 LCKP06239 509 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 CHRNB1P11230 501 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 CYBAP13498 195 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 GABRR1P24046 479 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 VIPR2P41587 438 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 CXCL12P48061 93 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 RGS6P49758 472 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 NFATC3Q12968 1075 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 STK11Q15831 433 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 NKPD1Q17RQ9 610 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 DEFB110Q30KQ9 67 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 CNIH2Q6PI25 160 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms