RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 MRPL22Q9NWU5 206 aaKnown RBP16.26■□□□□ 0.19
COL27A1-201ENST00000356083 RPL26L1Q9UNX3 145 aaKnown RBP16.26■□□□□ 0.19
COL27A1-201ENST00000356083 RIMBP3CA6NJZ7 1639 aa16.26■□□□□ 0.19
COL27A1-201ENST00000356083 RIMBP3BA6NNM3 1639 aa16.26■□□□□ 0.19
COL27A1-201ENST00000356083 RIMBP3Q9UFD9 1639 aa16.26■□□□□ 0.19
COL27A1-201ENST00000356083 ADGRB2O60241 1585 aa16.26■□□□□ 0.19
COL27A1-201ENST00000356083 OR7C1O76099 320 aaPredicted RBP16.26■□□□□ 0.19
COL27A1-201ENST00000356083 TMEM63AO94886 807 aa16.26■□□□□ 0.19
COL27A1-201ENST00000356083 PRSS3P35030 304 aa16.26■□□□□ 0.19
COL27A1-201ENST00000356083 VASPP50552 380 aaPredicted RBP16.26■□□□□ 0.19
COL27A1-201ENST00000356083 TAS2R38P59533 333 aa16.26■□□□□ 0.19
COL27A1-201ENST00000356083 MFSD5Q6N075 450 aa16.26■□□□□ 0.19
COL27A1-201ENST00000356083 ZNF296Q8WUU4 475 aaPredicted RBP16.26■□□□□ 0.19
COL27A1-201ENST00000356083 RDH14Q9HBH5 336 aa16.26■□□□□ 0.19
COL27A1-201ENST00000356083 TRIOBPQ9H2D6 2365 aa16.26■□□□□ 0.19
COL27A1-201ENST00000356083 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.26■□□□□ 0.19
COL27A1-201ENST00000356083 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.26■□□□□ 0.19
COL27A1-201ENST00000356083 NDUFB7P17568 137 aa16.26■□□□□ 0.19
COL27A1-201ENST00000356083 CHATP28329 748 aa16.26■□□□□ 0.19
COL27A1-201ENST00000356083 NXPE4Q6UWF7 544 aa16.26■□□□□ 0.19
COL27A1-201ENST00000356083 OR6C1Q96RD1 312 aa16.26■□□□□ 0.19
COL27A1-201ENST00000356083 SHARPINQ9H0F6 387 aa16.26■□□□□ 0.19
COL27A1-201ENST00000356083 TM7SF3Q9NS93 570 aa16.26■□□□□ 0.19
COL27A1-201ENST00000356083 BOKQ9UMX3 212 aaPredicted RBP16.26■□□□□ 0.19
COL27A1-201ENST00000356083 BCAT2O15382 392 aaPredicted RBP16.26■□□□□ 0.19
COL27A1-201ENST00000356083 FBXO24O75426 580 aa16.26■□□□□ 0.19
COL27A1-201ENST00000356083 IKZF1Q13422 519 aa16.26■□□□□ 0.19
COL27A1-201ENST00000356083 TP53I3Q53FA7 332 aa16.26■□□□□ 0.19
COL27A1-201ENST00000356083 ACSM3Q53FZ2 586 aa16.26■□□□□ 0.19
COL27A1-201ENST00000356083 FAM57BQ71RH2 274 aa16.26■□□□□ 0.19
COL27A1-201ENST00000356083 FNDC9Q8TBE3 224 aa16.26■□□□□ 0.19
COL27A1-201ENST00000356083 EHFQ9NZC4 300 aa16.26■□□□□ 0.19
COL27A1-201ENST00000356083 DLG5Q8TDM6 1919 aa16.26■□□□□ 0.19
COL27A1-201ENST00000356083 PEAK1Q9H792 1746 aa16.26■□□□□ 0.19
COL27A1-201ENST00000356083 TFP02787 698 aa16.26■□□□□ 0.19
COL27A1-201ENST00000356083 APCDD1Q8J025 514 aa16.26■□□□□ 0.19
COL27A1-201ENST00000356083 PAPD5Q8NDF8 572 aaKnown RBP16.26■□□□□ 0.19
COL27A1-201ENST00000356083 OR1J4Q8NGS1 313 aa16.26■□□□□ 0.19
COL27A1-201ENST00000356083 SECTM1Q8WVN6 248 aa16.26■□□□□ 0.19
COL27A1-201ENST00000356083 FOXRED1Q96CU9 486 aaPredicted RBP16.26■□□□□ 0.19
COL27A1-201ENST00000356083 SLC6A14Q9UN76 642 aa16.26■□□□□ 0.19
COL27A1-201ENST00000356083 FANCMQ8IYD8 2048 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 IGHV3-64DA0A0J9YX35 117 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 HTRA2O43464 458 aaPredicted RBP16.25■□□□□ 0.19
COL27A1-201ENST00000356083 CD1CP29017 333 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 VEGFCP49767 419 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 NKX2-5P52952 324 aaPredicted RBP16.25■□□□□ 0.19
COL27A1-201ENST00000356083 RAB11AP62491 216 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 TCTE1Q5JU00 501 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 ZNF678Q5SXM1 525 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 TSPAN33Q86UF1 283 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 OR5D16Q8NGK9 328 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 ARL11Q969Q4 196 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 MRIQ9BWK5 157 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 C1QTNF6Q9BXI9 259 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 UGDHO60701 494 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 HNF1AP20823 631 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 NTHL1P78549 312 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 FLI1Q01543 452 aaPredicted RBP16.25■□□□□ 0.19
COL27A1-201ENST00000356083 ZNF791Q3KP31 576 aaPredicted RBP16.25■□□□□ 0.19
COL27A1-201ENST00000356083 ANKRD54Q6NXT1 300 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 TMEFF1Q8IYR6 380 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 CBR1P16152 277 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 CERS1P27544 350 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 HLA-DMAP28067 261 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 DPY19L2P1Q6NXN4 242 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 NAT8LQ8N9F0 302 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 SYNPRQ8TBG9 265 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 ZNF516Q92618 1163 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 TOE1Q96GM8 510 aaKnown RBP16.25■□□□□ 0.19
COL27A1-201ENST00000356083 BMFQ96LC9 184 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 SLCO3A1Q9UIG8 710 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 RAB3DO95716 219 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 SSTR4P31391 388 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 TXNRD3NBQ6F5E7 133 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 ZDHHC16Q969W1 377 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 DCAF16Q9NXF7 216 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 CNIH4Q9P003 139 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 GABRA5P31644 462 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 THBS3P49746 956 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 CHTF18Q8WVB6 975 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 AMDHD1Q96NU7 426 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 SORCS2Q96PQ0 1159 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 CTRCQ99895 268 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 PATZ1Q9HBE1 687 aaKnown RBP16.25■□□□□ 0.19
COL27A1-201ENST00000356083 ANKMY1Q9P2S6 941 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 SSUH2Q9Y2M2 353 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 FBXO7Q9Y3I1 522 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 K7ERQ8 282 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 SNAP29O95721 258 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 TK1P04183 234 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 CT45A6P0DMU7 189 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 CT45A5P0DMU8 189 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 CT45A7P0DMV0 189 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 CT45A8P0DMV1 189 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 CT45A9P0DMV2 189 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 ZP2Q05996 745 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 MBTPS1Q14703 1052 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 CT45A2Q5DJT8 189 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms