RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 MGAMO43451 1857 aa13.18□□□□□ -0.3
SREBF1-202ENST00000355815 ADAP00813 363 aa13.18□□□□□ -0.3
SREBF1-202ENST00000355815 SRP9P49458 86 aaKnown RBP13.18□□□□□ -0.3
SREBF1-202ENST00000355815 CTF1Q16619 201 aa13.18□□□□□ -0.3
SREBF1-202ENST00000355815 TP53I3Q53FA7 332 aa13.18□□□□□ -0.3
SREBF1-202ENST00000355815 TANGO2Q6ICL3 276 aa13.18□□□□□ -0.3
SREBF1-202ENST00000355815 OR4C11Q6IEV9 310 aa13.18□□□□□ -0.3
SREBF1-202ENST00000355815 GDPGP1Q6ZNW5 385 aa13.18□□□□□ -0.3
SREBF1-202ENST00000355815 PAQR8Q8TEZ7 354 aa13.18□□□□□ -0.3
SREBF1-202ENST00000355815 ZNF768Q9H5H4 540 aaKnown RBP13.18□□□□□ -0.3
SREBF1-202ENST00000355815 GVINP1Q7Z2Y8 2422 aa13.18□□□□□ -0.3
SREBF1-202ENST00000355815 CCDC88CQ9P219 2028 aa13.18□□□□□ -0.3
SREBF1-202ENST00000355815 TRAV18A0A075B6X5 111 aa13.18□□□□□ -0.3
SREBF1-202ENST00000355815 GXYLT2A0PJZ3 443 aa13.18□□□□□ -0.3
SREBF1-202ENST00000355815 C2orf74A8MZ97 194 aa13.18□□□□□ -0.3
SREBF1-202ENST00000355815 B4DGG1 531 aa13.18□□□□□ -0.3
SREBF1-202ENST00000355815 WISP3O95389 354 aaPredicted RBP13.18□□□□□ -0.3
SREBF1-202ENST00000355815 FURINP09958 794 aa13.18□□□□□ -0.3
SREBF1-202ENST00000355815 DDOSTP39656 456 aa13.18□□□□□ -0.3
SREBF1-202ENST00000355815 CBX5P45973 191 aa13.18□□□□□ -0.3
SREBF1-202ENST00000355815 CDK3Q00526 305 aa13.18□□□□□ -0.3
SREBF1-202ENST00000355815 VASNQ6EMK4 673 aa13.18□□□□□ -0.3
SREBF1-202ENST00000355815 KLHDC8BQ8IXV7 354 aa13.18□□□□□ -0.3
SREBF1-202ENST00000355815 FBXO15Q8NCQ5 510 aaPredicted RBP13.18□□□□□ -0.3
SREBF1-202ENST00000355815 DDOQ99489 341 aa13.18□□□□□ -0.3
SREBF1-202ENST00000355815 TREX2Q9BQ50 279 aaPredicted RBP13.18□□□□□ -0.3
SREBF1-202ENST00000355815 DDX31Q9H8H2 851 aaKnown RBP13.18□□□□□ -0.3
SREBF1-202ENST00000355815 PLEKHA1Q9HB21 404 aa13.18□□□□□ -0.3
SREBF1-202ENST00000355815 TXNL4BQ9NX01 149 aaKnown RBP13.18□□□□□ -0.3
SREBF1-202ENST00000355815 PTPRZ1P23471 2315 aaPredicted RBP13.18□□□□□ -0.3
SREBF1-202ENST00000355815 CACNA1DQ01668 2161 aa13.18□□□□□ -0.3
SREBF1-202ENST00000355815 SCN3AQ9NY46 2000 aa13.18□□□□□ -0.3
SREBF1-202ENST00000355815 ZNF638Q14966 1978 aaKnown RBP13.18□□□□□ -0.3
SREBF1-202ENST00000355815 URADA6NGE7 173 aa13.18□□□□□ -0.3
SREBF1-202ENST00000355815 ZNF878C9JN71 531 aa13.18□□□□□ -0.3
SREBF1-202ENST00000355815 CYB5AP00167 134 aa13.18□□□□□ -0.3
SREBF1-202ENST00000355815 GKN3PP0CG01 181 aa13.18□□□□□ -0.3
SREBF1-202ENST00000355815 ITGB8P26012 769 aa13.18□□□□□ -0.3
SREBF1-202ENST00000355815 P2RY2P41231 377 aa13.18□□□□□ -0.3
SREBF1-202ENST00000355815 LACC1Q8IV20 430 aa13.18□□□□□ -0.3
SREBF1-202ENST00000355815 PM20D2Q8IYS1 436 aa13.18□□□□□ -0.3
SREBF1-202ENST00000355815 SAMD8Q96LT4 415 aa13.18□□□□□ -0.3
SREBF1-202ENST00000355815 LCTP09848 1927 aa13.18□□□□□ -0.3
SREBF1-202ENST00000355815 RGS9O75916 674 aaPredicted RBP13.17□□□□□ -0.3
SREBF1-202ENST00000355815 SNRPBP14678 240 aaKnown RBP13.17□□□□□ -0.3
SREBF1-202ENST00000355815 TGM1P22735 817 aa13.17□□□□□ -0.3
SREBF1-202ENST00000355815 CTBSQ01459 385 aa13.17□□□□□ -0.3
SREBF1-202ENST00000355815 PCGF3Q3KNV8 242 aa13.17□□□□□ -0.3
SREBF1-202ENST00000355815 METTL2BQ6P1Q9 378 aaKnown RBP13.17□□□□□ -0.3
SREBF1-202ENST00000355815 ZNF529Q6P280 563 aa13.17□□□□□ -0.3
SREBF1-202ENST00000355815 BRF2Q9HAW0 419 aa13.17□□□□□ -0.3
SREBF1-202ENST00000355815 NAALAD2Q9Y3Q0 740 aa13.17□□□□□ -0.3
SREBF1-202ENST00000355815 TEX13DA0A0J9YY54 714 aaPredicted RBP13.17□□□□□ -0.3
SREBF1-202ENST00000355815 UPK1AO00322 258 aa13.17□□□□□ -0.3
SREBF1-202ENST00000355815 UBXN7O94888 489 aa13.17□□□□□ -0.3
SREBF1-202ENST00000355815 PKLRP30613 574 aa13.17□□□□□ -0.3
SREBF1-202ENST00000355815 LSSP48449 732 aa13.17□□□□□ -0.3
SREBF1-202ENST00000355815 OR6N2Q8NGY6 317 aa13.17□□□□□ -0.3
SREBF1-202ENST00000355815 OR4K13Q8NH42 304 aa13.17□□□□□ -0.3
SREBF1-202ENST00000355815 FANK1Q8TC84 345 aa13.17□□□□□ -0.3
SREBF1-202ENST00000355815 TMEM41AQ96HV5 264 aa13.17□□□□□ -0.3
SREBF1-202ENST00000355815 INSM2Q96T92 566 aaPredicted RBP13.17□□□□□ -0.3
SREBF1-202ENST00000355815 IL21RQ9HBE5 538 aa13.17□□□□□ -0.3
SREBF1-202ENST00000355815 ZMAT5Q9UDW3 170 aaKnown RBP13.17□□□□□ -0.3
SREBF1-202ENST00000355815 TTLL8A6PVC2 850 aa13.17□□□□□ -0.3
SREBF1-202ENST00000355815 B3GALT2O43825 422 aa13.17□□□□□ -0.3
SREBF1-202ENST00000355815 VEGFDO43915 354 aa13.17□□□□□ -0.3
SREBF1-202ENST00000355815 ZNF780AO75290 641 aaPredicted RBP13.17□□□□□ -0.3
SREBF1-202ENST00000355815 AMY2AP04746 511 aa13.17□□□□□ -0.3
SREBF1-202ENST00000355815 PSMB10P40306 273 aa13.17□□□□□ -0.3
SREBF1-202ENST00000355815 RAB2AP61019 212 aa13.17□□□□□ -0.3
SREBF1-202ENST00000355815 GK2Q14410 553 aaPredicted RBP13.17□□□□□ -0.3
SREBF1-202ENST00000355815 IGSF11Q5DX21 431 aa13.17□□□□□ -0.3
SREBF1-202ENST00000355815 TCTE1Q5JU00 501 aa13.17□□□□□ -0.3
SREBF1-202ENST00000355815 LRIF1Q5T3J3 769 aa13.17□□□□□ -0.3
SREBF1-202ENST00000355815 CREB3L2Q70SY1 520 aa13.17□□□□□ -0.3
SREBF1-202ENST00000355815 ZNF527Q8NB42 609 aa13.17□□□□□ -0.3
SREBF1-202ENST00000355815 OR7G2Q8NG99 324 aa13.17□□□□□ -0.3
SREBF1-202ENST00000355815 OR52E4Q8NGH9 312 aa13.17□□□□□ -0.3
SREBF1-202ENST00000355815 SPPL3Q8TCT6 385 aa13.17□□□□□ -0.3
SREBF1-202ENST00000355815 UBTD2Q8WUN7 234 aa13.17□□□□□ -0.3
SREBF1-202ENST00000355815 SEC22AQ96IW7 307 aa13.17□□□□□ -0.3
SREBF1-202ENST00000355815 DHRS9Q9BPW9 319 aa13.17□□□□□ -0.3
SREBF1-202ENST00000355815 PINK1Q9BXM7 581 aa13.17□□□□□ -0.3
SREBF1-202ENST00000355815 SLC17A9Q9BYT1 436 aa13.17□□□□□ -0.3
SREBF1-202ENST00000355815 NIT2Q9NQR4 276 aa13.17□□□□□ -0.3
SREBF1-202ENST00000355815 MBNL1Q9NR56 388 aaKnown RBP13.17□□□□□ -0.3
SREBF1-202ENST00000355815 PARPBPQ9NWS1 579 aa13.17□□□□□ -0.3
SREBF1-202ENST00000355815 TMEFF2Q9UIK5 374 aaPredicted RBP13.17□□□□□ -0.3
SREBF1-202ENST00000355815 PAPPA2Q9BXP8 1791 aa13.16□□□□□ -0.3
SREBF1-202ENST00000355815 PRKYO43930 277 aa13.16□□□□□ -0.3
SREBF1-202ENST00000355815 UGDHO60701 494 aa13.16□□□□□ -0.3
SREBF1-202ENST00000355815 LDB3O75112 727 aa13.16□□□□□ -0.3
SREBF1-202ENST00000355815 HTR1AP08908 422 aa13.16□□□□□ -0.3
SREBF1-202ENST00000355815 CSRP3P50461 194 aa13.16□□□□□ -0.3
SREBF1-202ENST00000355815 RAB28P51157 221 aa13.16□□□□□ -0.3
SREBF1-202ENST00000355815 CDNFQ49AH0 187 aa13.16□□□□□ -0.3
SREBF1-202ENST00000355815 KDM4DQ6B0I6 523 aa13.16□□□□□ -0.3
SREBF1-202ENST00000355815 TMEM88Q6PEY1 159 aa13.16□□□□□ -0.3
SREBF1-202ENST00000355815 ACOT4Q8N9L9 421 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms