RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 MCCC2Q9HCC0 563 aa6.41□□□□□ -1.38
VPS13A-201ENST00000355766 BCL2L10Q9HD36 194 aa6.41□□□□□ -1.38
VPS13A-201ENST00000355766 IL1RAPQ9NPH3 570 aa6.41□□□□□ -1.38
VPS13A-201ENST00000355766 DLL4Q9NR61 685 aa6.41□□□□□ -1.38
VPS13A-201ENST00000355766 POLE3Q9NRF9 147 aa6.41□□□□□ -1.38
VPS13A-201ENST00000355766 SOHLH2Q9NX45 425 aa6.41□□□□□ -1.38
VPS13A-201ENST00000355766 P4HTMQ9NXG6 502 aa6.41□□□□□ -1.38
VPS13A-201ENST00000355766 BAG5Q9UL15 447 aa6.41□□□□□ -1.38
VPS13A-201ENST00000355766 DTNAQ9Y4J8 743 aa6.41□□□□□ -1.38
VPS13A-201ENST00000355766 MMACHCQ9Y4U1 282 aa6.41□□□□□ -1.38
VPS13A-201ENST00000355766 PCDHGB3Q9Y5G1 929 aa6.41□□□□□ -1.38
VPS13A-201ENST00000355766 NUP214P35658 2090 aaPredicted RBP6.41□□□□□ -1.38
VPS13A-201ENST00000355766 LOC105369274A0A096LPK9 316 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 LOC102723532A0A0G2JNH3 316 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 ARRDC5A6NEK1 342 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 SLC9B1P1A6NJY1 282 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 TMEM200CA6NKL6 621 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 A8MVJ9 347 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 H3BMH7 237 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 MASP2O00187 686 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 CCL21O00585 134 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 CLDN4O14493 209 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 ADAMDEC1O15204 470 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 DENRO43583 198 aaKnown RBP6.4□□□□□ -1.38
VPS13A-201ENST00000355766 COQ9O75208 318 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 SH3BGRLO75368 114 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 SERPINB7O75635 380 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 GPR75O95800 540 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 SERPINA1P01009 418 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 SLC35E2P0CK97 266 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 CPMP14384 443 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 PVRP15151 417 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 ZNF26P17031 533 aaPredicted RBP6.4□□□□□ -1.38
VPS13A-201ENST00000355766 AGAP20933 346 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 MSX2P35548 267 aaPredicted RBP6.4□□□□□ -1.38
VPS13A-201ENST00000355766 SOAT1P35610 550 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 FOLR3P41439 243 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 CRATP43155 626 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 CA7P43166 264 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 RPS6KA3P51812 740 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 CRISP3P54108 245 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 VSX2P58304 361 aaPredicted RBP6.4□□□□□ -1.38
VPS13A-201ENST00000355766 ADORA2A-AS1P86434 159 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 HSPB3Q12988 150 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 AIMP2Q13155 320 aaKnown RBP6.4□□□□□ -1.38
VPS13A-201ENST00000355766 TP53BP2Q13625 1128 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 SERTAD2Q14140 314 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 TAF11Q15544 211 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 INAQ16352 499 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 ZSWIM7Q19AV6 140 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 GRAMD1BQ3KR37 738 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.4□□□□□ -1.38
VPS13A-201ENST00000355766 VASNQ6EMK4 673 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 RPUSD3Q6P087 351 aaKnown RBP6.4□□□□□ -1.38
VPS13A-201ENST00000355766 XKRXQ6PP77 449 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 CRIP3Q6Q6R5 217 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 GFRALQ6UXV0 394 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 ZNF551Q7Z340 670 aaPredicted RBP6.4□□□□□ -1.38
VPS13A-201ENST00000355766 PPP1R32Q7Z5V6 425 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 RNF130Q86XS8 419 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 KRT73Q86Y46 540 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 ST13P4Q8IZP2 240 aaPredicted RBP6.4□□□□□ -1.38
VPS13A-201ENST00000355766 OR4N4Q8N0Y3 316 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 CA13Q8N1Q1 262 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 CELF2-AS1Q8N7Q2 184 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 OR1L3Q8NH93 324 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 GEMIN6Q8WXD5 167 aaKnown RBP6.4□□□□□ -1.38
VPS13A-201ENST00000355766 SLC35G5Q96KT7 338 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 TRNT1Q96Q11 434 aaKnown RBP6.4□□□□□ -1.38
VPS13A-201ENST00000355766 ZNF607Q96SK3 696 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 STACQ99469 402 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 PKP2Q99959 881 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 MAPKAP1Q9BPZ7 522 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 MEGF9Q9H1U4 602 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 SYNPO2LQ9H987 977 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 DUSP22Q9NRW4 184 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 ZCCHC3Q9NUD5 404 aaKnown RBP6.4□□□□□ -1.38
VPS13A-201ENST00000355766 USE1Q9NZ43 259 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 IFT80Q9P2H3 777 aaPredicted RBP6.4□□□□□ -1.38
VPS13A-201ENST00000355766 NAALAD2Q9Y3Q0 740 aa6.4□□□□□ -1.38
VPS13A-201ENST00000355766 ZNF469Q96JG9 3925 aaPredicted RBP6.4□□□□□ -1.39
VPS13A-201ENST00000355766 DSPPQ9NZW4 1301 aa6.4□□□□□ -1.39
VPS13A-201ENST00000355766 SEC16AO15027 2179 aa6.4□□□□□ -1.39
VPS13A-201ENST00000355766 DIDO1Q9BTC0 2240 aaKnown RBP6.4□□□□□ -1.39
VPS13A-201ENST00000355766 TMEM150CB9EJG8 249 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 C5orf58C9J3I9 102 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 H0YAE9 185 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 SYT5O00445 386 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 HMGN4O00479 90 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 OR2B3O76000 313 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 PRKD3O94806 890 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 ONECUT2O95948 504 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 KNG1P01042 644 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 FABP3P05413 133 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 HBQ1P09105 142 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 TFPTP0C1Z6 253 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 UQCRBP14927 111 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 NCK1P16333 377 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 PORP16435 677 aaPredicted RBP6.39□□□□□ -1.39
VPS13A-201ENST00000355766 FAHP16930 419 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms