RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 NRMQ8IXM6 262 aa18.84■□□□□ 0.61
TRIM4-202ENST00000354241 FAM71CQ8NEG0 241 aa18.84■□□□□ 0.61
TRIM4-202ENST00000354241 NLGN4YQ8NFZ3 816 aaPredicted RBP18.84■□□□□ 0.61
TRIM4-202ENST00000354241 OR11G2Q8NGC1 345 aa18.84■□□□□ 0.61
TRIM4-202ENST00000354241 ELP5Q8TE02 316 aa18.84■□□□□ 0.61
TRIM4-202ENST00000354241 FAM46AQ96IP4 442 aaKnown RBP18.84■□□□□ 0.61
TRIM4-202ENST00000354241 HRASLS5Q96KN8 279 aa18.84■□□□□ 0.61
TRIM4-202ENST00000354241 IMMP1LQ96LU5 166 aa18.84■□□□□ 0.61
TRIM4-202ENST00000354241 REV1Q9UBZ9 1251 aa18.84■□□□□ 0.61
TRIM4-202ENST00000354241 NSG1A0A0A6YYJ2 146 aa18.83■□□□□ 0.6
TRIM4-202ENST00000354241 A0A0B4J2E0 115 aa18.83■□□□□ 0.6
TRIM4-202ENST00000354241 A0A1B0GX12 115 aa18.83■□□□□ 0.6
TRIM4-202ENST00000354241 E9PQ18 207 aa18.83■□□□□ 0.6
TRIM4-202ENST00000354241 ZNF264O43296 627 aa18.83■□□□□ 0.6
TRIM4-202ENST00000354241 SMNDC1O75940 238 aaKnown RBP eCLIP18.83■□□□□ 0.6
TRIM4-202ENST00000354241 NADKO95544 446 aaPredicted RBP18.83■□□□□ 0.6
TRIM4-202ENST00000354241 CELA2AP08217 269 aa18.83■□□□□ 0.6
TRIM4-202ENST00000354241 CRISP1P54107 249 aa18.83■□□□□ 0.6
TRIM4-202ENST00000354241 ISL1P61371 349 aa18.83■□□□□ 0.6
TRIM4-202ENST00000354241 ALDH6A1Q02252 535 aaKnown RBP18.83■□□□□ 0.6
TRIM4-202ENST00000354241 EFR3AQ14156 821 aa18.83■□□□□ 0.6
TRIM4-202ENST00000354241 CTU2Q2VPK5 515 aaKnown RBP18.83■□□□□ 0.6
TRIM4-202ENST00000354241 LSMEM1Q8N8F7 131 aa18.83■□□□□ 0.6
TRIM4-202ENST00000354241 POGLUT1Q8NBL1 392 aa18.83■□□□□ 0.6
TRIM4-202ENST00000354241 GPA33Q99795 319 aa18.83■□□□□ 0.6
TRIM4-202ENST00000354241 RTN4RQ9BZR6 473 aa18.83■□□□□ 0.6
TRIM4-202ENST00000354241 CNIH4Q9P003 139 aa18.83■□□□□ 0.6
TRIM4-202ENST00000354241 MYOTQ9UBF9 498 aa18.83■□□□□ 0.6
TRIM4-202ENST00000354241 KNTC1P50748 2209 aa18.83■□□□□ 0.6
TRIM4-202ENST00000354241 H3BN98 237 aa18.82■□□□□ 0.6
TRIM4-202ENST00000354241 NDUFB5O43674 189 aa18.82■□□□□ 0.6
TRIM4-202ENST00000354241 CHMP24386 653 aa18.82■□□□□ 0.6
TRIM4-202ENST00000354241 EVI2BP34910 448 aa18.82■□□□□ 0.6
TRIM4-202ENST00000354241 GGT2P36268 569 aa18.82■□□□□ 0.6
TRIM4-202ENST00000354241 FBXW4P57775 412 aa18.82■□□□□ 0.6
TRIM4-202ENST00000354241 COPZ1P61923 177 aa18.82■□□□□ 0.6
TRIM4-202ENST00000354241 SKP2Q13309 424 aa18.82■□□□□ 0.6
TRIM4-202ENST00000354241 DNASE1L3Q13609 305 aa18.82■□□□□ 0.6
TRIM4-202ENST00000354241 NDUFAF7Q7L592 441 aa18.82■□□□□ 0.6
TRIM4-202ENST00000354241 SH3YL1Q96HL8 342 aaPredicted RBP18.82■□□□□ 0.6
TRIM4-202ENST00000354241 ZNF160Q9HCG1 818 aa18.82■□□□□ 0.6
TRIM4-202ENST00000354241 KRCC1Q9NPI7 259 aaPredicted RBP18.82■□□□□ 0.6
TRIM4-202ENST00000354241 MUC6Q6W4X9 2439 aa18.82■□□□□ 0.6
TRIM4-202ENST00000354241 A0A1W2PQD3 144 aa18.82■□□□□ 0.6
TRIM4-202ENST00000354241 ALG1L2C9J202 215 aa18.82■□□□□ 0.6
TRIM4-202ENST00000354241 CHP2O43745 196 aa18.82■□□□□ 0.6
TRIM4-202ENST00000354241 SCO2O43819 266 aa18.82■□□□□ 0.6
TRIM4-202ENST00000354241 NGFRP08138 427 aa18.82■□□□□ 0.6
TRIM4-202ENST00000354241 IGFBP1P08833 259 aaPredicted RBP18.82■□□□□ 0.6
TRIM4-202ENST00000354241 LINGO3P0C6S8 592 aa18.82■□□□□ 0.6
TRIM4-202ENST00000354241 DLSTP36957 453 aa18.82■□□□□ 0.6
TRIM4-202ENST00000354241 OMPP47874 163 aa18.82■□□□□ 0.6
TRIM4-202ENST00000354241 COX10Q12887 443 aa18.82■□□□□ 0.6
TRIM4-202ENST00000354241 PTGES3Q15185 160 aaKnown RBP18.82■□□□□ 0.6
TRIM4-202ENST00000354241 ALG10BQ5I7T1 473 aa18.82■□□□□ 0.6
TRIM4-202ENST00000354241 TMEM236Q5W0B7 351 aa18.82■□□□□ 0.6
TRIM4-202ENST00000354241 PLAG1Q6DJT9 500 aa18.82■□□□□ 0.6
TRIM4-202ENST00000354241 CBLN3Q6UW01 205 aa18.82■□□□□ 0.6
TRIM4-202ENST00000354241 PPP1R32Q7Z5V6 425 aa18.82■□□□□ 0.6
TRIM4-202ENST00000354241 CCDC71Q8IV32 467 aaPredicted RBP18.82■□□□□ 0.6
TRIM4-202ENST00000354241 CNIH3Q8TBE1 160 aa18.82■□□□□ 0.6
TRIM4-202ENST00000354241 FAM81AQ8TBF8 368 aa18.82■□□□□ 0.6
TRIM4-202ENST00000354241 M1APQ8TC57 530 aa18.82■□□□□ 0.6
TRIM4-202ENST00000354241 TMEM239Q8WW34 195 aa18.82■□□□□ 0.6
TRIM4-202ENST00000354241 ADNPQ9H2P0 1102 aa18.82■□□□□ 0.6
TRIM4-202ENST00000354241 EXOSC3Q9NQT5 275 aaKnown RBP18.82■□□□□ 0.6
TRIM4-202ENST00000354241 SELENONQ9NZV5 590 aa18.82■□□□□ 0.6
TRIM4-202ENST00000354241 HSPE1-MOB4S4R3N1 261 aa18.82■□□□□ 0.6
TRIM4-202ENST00000354241 RAD1O60671 282 aa18.81■□□□□ 0.6
TRIM4-202ENST00000354241 OR2J2O76002 312 aa18.81■□□□□ 0.6
TRIM4-202ENST00000354241 SMIM18P0DKX4 95 aa18.81■□□□□ 0.6
TRIM4-202ENST00000354241 GSTM3P21266 225 aa18.81■□□□□ 0.6
TRIM4-202ENST00000354241 CSRP1P21291 193 aaKnown RBP18.81■□□□□ 0.6
TRIM4-202ENST00000354241 GPR4P46093 362 aa18.81■□□□□ 0.6
TRIM4-202ENST00000354241 IDH2P48735 452 aaKnown RBP18.81■□□□□ 0.6
TRIM4-202ENST00000354241 NUP107P57740 925 aa18.81■□□□□ 0.6
TRIM4-202ENST00000354241 SSPNQ14714 243 aa18.81■□□□□ 0.6
TRIM4-202ENST00000354241 CD300LDQ6UXZ3 194 aa18.81■□□□□ 0.6
TRIM4-202ENST00000354241 ASCL5Q7RTU5 278 aa18.81■□□□□ 0.6
TRIM4-202ENST00000354241 TMPRSS12Q86WS5 348 aa18.81■□□□□ 0.6
TRIM4-202ENST00000354241 SLC22A8Q8TCC7 542 aa18.81■□□□□ 0.6
TRIM4-202ENST00000354241 LAT2Q9GZY6 243 aa18.81■□□□□ 0.6
TRIM4-202ENST00000354241 KPNA4O00629 521 aaPredicted RBP18.8■□□□□ 0.6
TRIM4-202ENST00000354241 HCRTR2O43614 444 aa18.8■□□□□ 0.6
TRIM4-202ENST00000354241 GMFGO60234 142 aa18.8■□□□□ 0.6
TRIM4-202ENST00000354241 FADS1O60427 444 aa18.8■□□□□ 0.6
TRIM4-202ENST00000354241 ANGPTL1O95841 491 aa18.8■□□□□ 0.6
TRIM4-202ENST00000354241 STAT5AP42229 794 aa18.8■□□□□ 0.6
TRIM4-202ENST00000354241 GABREP78334 506 aa18.8■□□□□ 0.6
TRIM4-202ENST00000354241 ZNF117Q03924 483 aa18.8■□□□□ 0.6
TRIM4-202ENST00000354241 TSPAN31Q12999 210 aa18.8■□□□□ 0.6
TRIM4-202ENST00000354241 ULK3Q6PHR2 472 aa18.8■□□□□ 0.6
TRIM4-202ENST00000354241 PFN4Q8NHR9 129 aa18.8■□□□□ 0.6
TRIM4-202ENST00000354241 UBE2FQ969M7 185 aa18.8■□□□□ 0.6
TRIM4-202ENST00000354241 NODALQ96S42 347 aa18.8■□□□□ 0.6
TRIM4-202ENST00000354241 MMP25Q9NPA2 562 aa18.8■□□□□ 0.6
TRIM4-202ENST00000354241 RASSF1Q9NS23 344 aa18.8■□□□□ 0.6
TRIM4-202ENST00000354241 AASSQ9UDR5 926 aa18.8■□□□□ 0.6
TRIM4-202ENST00000354241 ZAR1LA6NP61 321 aa18.8■□□□□ 0.6
TRIM4-202ENST00000354241 C17orf51A8MQB3 221 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms