RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 PLPPR4Q7Z2D5 763 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 THEM5Q8N1Q8 247 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 NKAPQ8N5F7 415 aaKnown RBP9.94□□□□□ -0.82
CAPN3-203ENST00000349748 OR10J5Q8NHC4 309 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 PXYLP1Q8TE99 480 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 RAB3CQ96E17 227 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 ZFP42Q96MM3 310 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 ZNF471Q9BX82 626 aaPredicted RBP9.94□□□□□ -0.82
CAPN3-203ENST00000349748 EGLN1Q9GZT9 426 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 KLHL1Q9NR64 748 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 UXTQ9UBK9 157 aaPredicted RBP9.94□□□□□ -0.82
CAPN3-203ENST00000349748 MOKQ9UQ07 419 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 MMACHCQ9Y4U1 282 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 FNDC1Q4ZHG4 1894 aaPredicted RBP9.94□□□□□ -0.82
CAPN3-203ENST00000349748 TMEM72A0PK05 275 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 F5H5P2 479 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 FMO6PO60774 539 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 SNRPBP14678 240 aaKnown RBP9.93□□□□□ -0.82
CAPN3-203ENST00000349748 MGMTP16455 207 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 PDHA2P29803 388 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 CRATP43155 626 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 RPL34P49207 117 aaKnown RBP9.93□□□□□ -0.82
CAPN3-203ENST00000349748 CCR8P51685 355 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 ART1P52961 327 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 WNT3P56703 355 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 NUTF2P61970 127 aaKnown RBP9.93□□□□□ -0.82
CAPN3-203ENST00000349748 COTL1Q14019 142 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 KCNAB1Q14722 419 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 OCLNQ16625 522 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 LINC00303Q3SY05 128 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 COX20Q5RI15 118 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 TCEAL6Q6IPX3 200 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 RNF175Q8N4F7 328 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 OR4F15Q8NGB8 312 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 GPBAR1Q8TDU6 330 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 PAQR8Q8TEZ7 354 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 APIPQ96GX9 242 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 SLC2A13Q96QE2 648 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 DUSP15Q9H1R2 295 aaPredicted RBP9.93□□□□□ -0.82
CAPN3-203ENST00000349748 CRLF2Q9HC73 371 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 ACKR4Q9NPB9 350 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 TMEM161AQ9NX61 479 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 GDE1Q9NZC3 331 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 FFAR1O14842 300 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 NDUFS3O75489 264 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 UBL3O95164 117 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 PDYNP01213 254 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 GNSP15586 552 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 OPRD1P41143 372 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 MTNR1BP49286 362 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 CDH4P55283 916 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 DLX5P56178 289 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 GMFBP60983 142 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 GAB1Q13480 694 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 LIPJQ5W064 366 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 ACSM5Q6NUN0 579 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 FIGNL1Q6PIW4 674 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 TRIM46Q7Z4K8 759 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 MEX3DQ86XN8 651 aaKnown RBP9.93□□□□□ -0.82
CAPN3-203ENST00000349748 OR6J1Q8NGC5 347 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 OR4A4PQ8NGN8 299 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 SP7Q8TDD2 431 aaPredicted RBP9.93□□□□□ -0.82
CAPN3-203ENST00000349748 LRIG1Q96JA1 1093 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 CNTNAP3BQ96NU0 1288 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 TRMT61BQ9BVS5 477 aaKnown RBP9.93□□□□□ -0.82
CAPN3-203ENST00000349748 ULBP1Q9BZM6 244 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 POLR2J3Q9H1A7 115 aaKnown RBP9.93□□□□□ -0.82
CAPN3-203ENST00000349748 KLHL31Q9H511 634 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 SMCO4Q9NRQ5 59 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 A8MVJ9 347 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 FADS1O60427 444 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 SCN2BO60939 215 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 RPA2P15927 270 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 LSM6P62312 80 aaKnown RBP9.93□□□□□ -0.82
CAPN3-203ENST00000349748 CDK6Q00534 326 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 BEX3Q00994 111 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 RGNQ15493 299 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 AARDQ4LEZ3 155 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 ADAM5Q6NVV9 412 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 RTL10Q7L3V2 364 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 SYT9Q86SS6 491 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 TMPRSS11BQ86T26 416 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 TMEM200AQ86VY9 491 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 RNF113BQ8IZP6 322 aaKnown RBP9.93□□□□□ -0.82
CAPN3-203ENST00000349748 ZNF485Q8NCK3 441 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 FBXO15Q8NCQ5 510 aaPredicted RBP9.93□□□□□ -0.82
CAPN3-203ENST00000349748 NFKBIDQ8NI38 313 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 CD200R1Q8TD46 325 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 ZNF559Q9BR84 538 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 SLC25A51Q9H1U9 297 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 CHST8Q9H2A9 424 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 UQCC1Q9NVA1 299 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 FBXL3Q9UKT7 428 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 AKT3Q9Y243 479 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 TP53TG5Q9Y2B4 290 aa9.93□□□□□ -0.82
CAPN3-203ENST00000349748 PRSS47A8MTI9 375 aa9.92□□□□□ -0.82
CAPN3-203ENST00000349748 TAPBPO15533 448 aa9.92□□□□□ -0.82
CAPN3-203ENST00000349748 RPP40O75818 363 aaKnown RBP9.92□□□□□ -0.82
CAPN3-203ENST00000349748 SNAPC5O75971 98 aa9.92□□□□□ -0.82
CAPN3-203ENST00000349748 LAMP1P11279 417 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms