RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 CTU2Q2VPK5 515 aaKnown RBP17.14■□□□□ 0.33
PTN-201ENST00000348225 BTBD16Q32M84 506 aa17.14■□□□□ 0.33
PTN-201ENST00000348225 NDUFAF6Q330K2 333 aa17.14■□□□□ 0.33
PTN-201ENST00000348225 FAM69BQ5VUD6 431 aa17.14■□□□□ 0.33
PTN-201ENST00000348225 TIPARPQ7Z3E1 657 aaKnown RBP17.14■□□□□ 0.33
PTN-201ENST00000348225 PRICKLE2Q7Z3G6 844 aa17.14■□□□□ 0.33
PTN-201ENST00000348225 NRMQ8IXM6 262 aa17.14■□□□□ 0.33
PTN-201ENST00000348225 TMCO5AQ8N6Q1 288 aa17.14■□□□□ 0.33
PTN-201ENST00000348225 FAM81AQ8TBF8 368 aa17.14■□□□□ 0.33
PTN-201ENST00000348225 DEFB126Q9BYW3 111 aa17.14■□□□□ 0.33
PTN-201ENST00000348225 SPRY4Q9C004 299 aa17.14■□□□□ 0.33
PTN-201ENST00000348225 A0A087WXM4 84 aa17.13■□□□□ 0.33
PTN-201ENST00000348225 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.13■□□□□ 0.33
PTN-201ENST00000348225 DKK1O94907 266 aa17.13■□□□□ 0.33
PTN-201ENST00000348225 FTH1P19P0C7X4 201 aa17.13■□□□□ 0.33
PTN-201ENST00000348225 COX6A1P12074 109 aa17.13■□□□□ 0.33
PTN-201ENST00000348225 FPR3P25089 353 aa17.13■□□□□ 0.33
PTN-201ENST00000348225 RBM34P42696 430 aaKnown RBP17.13■□□□□ 0.33
PTN-201ENST00000348225 SLC6A8P48029 635 aa17.13■□□□□ 0.33
PTN-201ENST00000348225 GSSP48637 474 aa17.13■□□□□ 0.33
PTN-201ENST00000348225 IDH2P48735 452 aaKnown RBP17.13■□□□□ 0.33
PTN-201ENST00000348225 TMED10P49755 219 aaKnown RBP17.13■□□□□ 0.33
PTN-201ENST00000348225 RPS15P62841 145 aaKnown RBP17.13■□□□□ 0.33
PTN-201ENST00000348225 SKP2Q13309 424 aa17.13■□□□□ 0.33
PTN-201ENST00000348225 CDK5R2Q13319 367 aa17.13■□□□□ 0.33
PTN-201ENST00000348225 ALG10BQ5I7T1 473 aa17.13■□□□□ 0.33
PTN-201ENST00000348225 ULK3Q6PHR2 472 aa17.13■□□□□ 0.33
PTN-201ENST00000348225 APOOLQ6UXV4 268 aa17.13■□□□□ 0.33
PTN-201ENST00000348225 Q6ZPB1 254 aaPredicted RBP17.13■□□□□ 0.33
PTN-201ENST00000348225 CADM2Q8N3J6 435 aa17.13■□□□□ 0.33
PTN-201ENST00000348225 SLC22A8Q8TCC7 542 aa17.13■□□□□ 0.33
PTN-201ENST00000348225 ELP5Q8TE02 316 aa17.13■□□□□ 0.33
PTN-201ENST00000348225 THAP3Q8WTV1 239 aaPredicted RBP17.13■□□□□ 0.33
PTN-201ENST00000348225 FAM46AQ96IP4 442 aaKnown RBP17.13■□□□□ 0.33
PTN-201ENST00000348225 B3GNT4Q9C0J1 378 aa17.13■□□□□ 0.33
PTN-201ENST00000348225 LAT2Q9GZY6 243 aa17.13■□□□□ 0.33
PTN-201ENST00000348225 ZBTB20Q9HC78 741 aaPredicted RBP17.13■□□□□ 0.33
PTN-201ENST00000348225 IMPAD1Q9NX62 359 aa17.13■□□□□ 0.33
PTN-201ENST00000348225 TUBA8Q9NY65 449 aaPredicted RBP17.13■□□□□ 0.33
PTN-201ENST00000348225 FOXJ2Q9P0K8 574 aa17.13■□□□□ 0.33
PTN-201ENST00000348225 TCFL5Q9UL49 500 aa17.13■□□□□ 0.33
PTN-201ENST00000348225 PCNX2A6NKB5 2137 aa17.12■□□□□ 0.33
PTN-201ENST00000348225 A0A1W2PQ72 361 aa17.12■□□□□ 0.33
PTN-201ENST00000348225 TRIM64A6NGJ6 449 aa17.12■□□□□ 0.33
PTN-201ENST00000348225 WWP2O00308 870 aa17.12■□□□□ 0.33
PTN-201ENST00000348225 NDUFB5O43674 189 aa17.12■□□□□ 0.33
PTN-201ENST00000348225 EIF4E2O60573 245 aaKnown RBP17.12■□□□□ 0.33
PTN-201ENST00000348225 ADAM11O75078 769 aa17.12■□□□□ 0.33
PTN-201ENST00000348225 SOX14O95416 240 aa17.12■□□□□ 0.33
PTN-201ENST00000348225 ANGPTL1O95841 491 aa17.12■□□□□ 0.33
PTN-201ENST00000348225 LINGO3P0C6S8 592 aa17.12■□□□□ 0.33
PTN-201ENST00000348225 ATP6V1B1P15313 513 aa17.12■□□□□ 0.33
PTN-201ENST00000348225 EVI2BP34910 448 aa17.12■□□□□ 0.33
PTN-201ENST00000348225 STAT5AP42229 794 aa17.12■□□□□ 0.33
PTN-201ENST00000348225 LIMK1P53667 647 aa17.12■□□□□ 0.33
PTN-201ENST00000348225 TUBA4AP68366 448 aa17.12■□□□□ 0.33
PTN-201ENST00000348225 LSM11P83369 360 aaKnown RBP eCLIP17.12■□□□□ 0.33
PTN-201ENST00000348225 PLAG1Q6DJT9 500 aa17.12■□□□□ 0.33
PTN-201ENST00000348225 CCDC71Q8IV32 467 aaPredicted RBP17.12■□□□□ 0.33
PTN-201ENST00000348225 CDK20Q8IZL9 346 aa17.12■□□□□ 0.33
PTN-201ENST00000348225 POGLUT1Q8NBL1 392 aa17.12■□□□□ 0.33
PTN-201ENST00000348225 M1APQ8TC57 530 aa17.12■□□□□ 0.33
PTN-201ENST00000348225 DNAJA4Q8WW22 397 aaPredicted RBP17.12■□□□□ 0.33
PTN-201ENST00000348225 ZNF566Q969W8 418 aa17.12■□□□□ 0.33
PTN-201ENST00000348225 MYOTQ9UBF9 498 aa17.12■□□□□ 0.33
PTN-201ENST00000348225 FARSAQ9Y285 508 aaKnown RBP17.12■□□□□ 0.33
PTN-201ENST00000348225 TMEM5Q9Y2B1 443 aa17.12■□□□□ 0.33
PTN-201ENST00000348225 CARD8Q9Y2G2 431 aa17.12■□□□□ 0.33
PTN-201ENST00000348225 MED31Q9Y3C7 131 aa17.12■□□□□ 0.33
PTN-201ENST00000348225 NSG1A0A0A6YYJ2 146 aa17.11■□□□□ 0.33
PTN-201ENST00000348225 TMEM200CA6NKL6 621 aa17.11■□□□□ 0.33
PTN-201ENST00000348225 SMNDC1O75940 238 aaKnown RBP eCLIP17.11■□□□□ 0.33
PTN-201ENST00000348225 OR6B1O95007 311 aa17.11■□□□□ 0.33
PTN-201ENST00000348225 CCDC159P0C7I6 412 aa17.11■□□□□ 0.33
PTN-201ENST00000348225 HLCSP50747 726 aa17.11■□□□□ 0.33
PTN-201ENST00000348225 CCR4P51679 360 aa17.11■□□□□ 0.33
PTN-201ENST00000348225 GABARAPL2P60520 117 aa17.11■□□□□ 0.33
PTN-201ENST00000348225 CXCR4P61073 352 aa17.11■□□□□ 0.33
PTN-201ENST00000348225 KIRREL2Q6UWL6 708 aa17.11■□□□□ 0.33
PTN-201ENST00000348225 WDR88Q6ZMY6 472 aa17.11■□□□□ 0.33
PTN-201ENST00000348225 RASSF6Q6ZTQ3 369 aa17.11■□□□□ 0.33
PTN-201ENST00000348225 NDUFAF7Q7L592 441 aa17.11■□□□□ 0.33
PTN-201ENST00000348225 MISPQ8IVT2 679 aa17.11■□□□□ 0.33
PTN-201ENST00000348225 ENTHD1Q8IYW4 607 aa17.11■□□□□ 0.33
PTN-201ENST00000348225 CACTIN-AS1Q8N1I8 211 aa17.11■□□□□ 0.33
PTN-201ENST00000348225 CNIH3Q8TBE1 160 aa17.11■□□□□ 0.33
PTN-201ENST00000348225 TMCO6Q96DC7 493 aa17.11■□□□□ 0.33
PTN-201ENST00000348225 IMMP1LQ96LU5 166 aa17.11■□□□□ 0.33
PTN-201ENST00000348225 CCNL2Q96S94 520 aaPredicted RBP17.11■□□□□ 0.33
PTN-201ENST00000348225 GPA33Q99795 319 aa17.11■□□□□ 0.33
PTN-201ENST00000348225 FAM117AQ9C073 453 aa17.11■□□□□ 0.33
PTN-201ENST00000348225 MMP25Q9NPA2 562 aa17.11■□□□□ 0.33
PTN-201ENST00000348225 CNIH4Q9P003 139 aa17.11■□□□□ 0.33
PTN-201ENST00000348225 RNF6Q9Y252 685 aa17.11■□□□□ 0.33
PTN-201ENST00000348225 SPAARA0A1B0GVQ0 90 aa17.1■□□□□ 0.33
PTN-201ENST00000348225 SLC1A7O00341 560 aa17.1■□□□□ 0.33
PTN-201ENST00000348225 SOCS6O14544 535 aa17.1■□□□□ 0.33
PTN-201ENST00000348225 PIP5K1CO60331 668 aa17.1■□□□□ 0.33
PTN-201ENST00000348225 FADS1O60427 444 aa17.1■□□□□ 0.33
PTN-201ENST00000348225 MPZL2O60487 215 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms