RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 WDR55Q9H6Y2 383 aaPredicted RBP4.77□□□□□ -1.65
VCAM1-202ENST00000347652 AKTIPQ9H8T0 292 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 SIDT1Q9NXL6 827 aaKnown RBP4.77□□□□□ -1.65
VCAM1-202ENST00000347652 VPS29Q9UBQ0 182 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 SLC23A1Q9UHI7 598 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 NEUROG3Q9Y4Z2 214 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 ADAMTS20P59510 1910 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 AHCTF1Q8WYP5 2266 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 FITM1A5D6W6 292 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 CDRT15L2A8MXV6 281 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 TMX2-CTNND1H3BSU7 103 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 NDUFAB1O14561 156 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 SNX3O60493 162 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 STATHP02808 62 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 SERPIND1P05546 499 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 CRYGCP07315 174 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 ZNF888P0CJ79 500 aaPredicted RBP4.77□□□□□ -1.65
VCAM1-202ENST00000347652 SMIM10L1P0DMW3 83 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 PAICSP22234 425 aaKnown RBP4.77□□□□□ -1.65
VCAM1-202ENST00000347652 TACR1P25103 407 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 EPHA3P29320 983 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 HNRNPH1P31943 449 aaKnown RBP4.77□□□□□ -1.65
VCAM1-202ENST00000347652 TRHRP34981 398 aaPredicted RBP4.77□□□□□ -1.65
VCAM1-202ENST00000347652 CYP4F2P78329 520 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 HMGCS1Q01581 520 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 RGS1Q08116 209 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 KIAA0040Q15053 153 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 SGCAQ16586 387 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 IMPG1Q17R60 797 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 HKDC1Q2TB90 917 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 PRTGQ2VWP7 1150 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 LRRC23Q53EV4 343 aaPredicted RBP4.77□□□□□ -1.65
VCAM1-202ENST00000347652 TMEM35AQ53FP2 167 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 WASHC2DQ5SRD0 308 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 KHDRBS2Q5VWX1 349 aaKnown RBP4.77□□□□□ -1.65
VCAM1-202ENST00000347652 PRAMEF7Q5VXH5 474 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 CLEC9AQ6UXN8 241 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 MOB3CQ70IA8 216 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 RNF144BQ7Z419 303 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 CSNK1A1LQ8N752 337 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 SLC24A4Q8NFF2 622 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 OR1L3Q8NH93 324 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 TMEM171Q8WVE6 324 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 WDR60Q8WVS4 1066 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 GFM2Q969S9 779 aaKnown RBP4.77□□□□□ -1.65
VCAM1-202ENST00000347652 MS4A6EQ96DS6 147 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 SMIM10Q96HG1 83 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 METTL2AQ96IZ6 378 aaKnown RBP4.77□□□□□ -1.65
VCAM1-202ENST00000347652 ZNF479Q96JC4 524 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 FCRL1Q96LA6 429 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 OR52B2Q96RD2 323 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 F2RL3Q96RI0 385 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 MACROD1Q9BQ69 325 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 TMEM246Q9BRR3 403 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 TINAGL1Q9GZM7 467 aaPredicted RBP4.77□□□□□ -1.65
VCAM1-202ENST00000347652 SPRTNQ9H040 489 aaPredicted RBP4.77□□□□□ -1.65
VCAM1-202ENST00000347652 FAM107BQ9H098 131 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 OR51B5Q9H339 312 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 ANKRA2Q9H9E1 313 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 OCIAD1Q9NX40 245 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 CNOT2Q9NZN8 540 aaKnown RBP4.77□□□□□ -1.65
VCAM1-202ENST00000347652 HCN3Q9P1Z3 774 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 PISDQ9UG56 409 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 RHBDD3Q9Y3P4 386 aa4.77□□□□□ -1.65
VCAM1-202ENST00000347652 PKD1L2Q7Z442 2459 aa4.76□□□□□ -1.65
VCAM1-202ENST00000347652 URB1O60287 2271 aaKnown RBP4.76□□□□□ -1.65
VCAM1-202ENST00000347652 A0A0G2JND7 137 aa4.76□□□□□ -1.65
VCAM1-202ENST00000347652 GOLGA8QA0A0J9YX86 632 aa4.76□□□□□ -1.65
VCAM1-202ENST00000347652 ATP6AP2A0A1C7CYW4 349 aa4.76□□□□□ -1.65
VCAM1-202ENST00000347652 C4orf51C9J302 202 aa4.76□□□□□ -1.65
VCAM1-202ENST00000347652 PLPP1O14494 284 aa4.76□□□□□ -1.65
VCAM1-202ENST00000347652 TXNDC9O14530 226 aa4.76□□□□□ -1.65
VCAM1-202ENST00000347652 MITFO75030 526 aaPredicted RBP4.76□□□□□ -1.65
VCAM1-202ENST00000347652 ATP6AP2O75787 350 aa4.76□□□□□ -1.65
VCAM1-202ENST00000347652 KDM4BO94953 1096 aa4.76□□□□□ -1.65
VCAM1-202ENST00000347652 SEMA3DO95025 777 aa4.76□□□□□ -1.65
VCAM1-202ENST00000347652 SLC35G6P0C7Q6 338 aa4.76□□□□□ -1.65
VCAM1-202ENST00000347652 PIM1P11309 404 aaPredicted RBP4.76□□□□□ -1.65
VCAM1-202ENST00000347652 PRPS2P11908 318 aa4.76□□□□□ -1.65
VCAM1-202ENST00000347652 PTNP21246 168 aa4.76□□□□□ -1.65
VCAM1-202ENST00000347652 POU1F1P28069 291 aa4.76□□□□□ -1.65
VCAM1-202ENST00000347652 CSTF2P33240 577 aaKnown RBP eCLIP4.76□□□□□ -1.65
VCAM1-202ENST00000347652 EMP3P54852 163 aa4.76□□□□□ -1.65
VCAM1-202ENST00000347652 STXBP1P61764 594 aaKnown RBP4.76□□□□□ -1.65
VCAM1-202ENST00000347652 RAE1P78406 368 aaKnown RBP4.76□□□□□ -1.65
VCAM1-202ENST00000347652 CYLC2Q14093 348 aaPredicted RBP4.76□□□□□ -1.65
VCAM1-202ENST00000347652 LSM12Q3MHD2 195 aaKnown RBP4.76□□□□□ -1.65
VCAM1-202ENST00000347652 RFTN2Q52LD8 501 aaPredicted RBP4.76□□□□□ -1.65
VCAM1-202ENST00000347652 ZNF311Q5JNZ3 666 aa4.76□□□□□ -1.65
VCAM1-202ENST00000347652 C6orf136Q5SQH8 315 aa4.76□□□□□ -1.65
VCAM1-202ENST00000347652 ZFAND4Q86XD8 727 aa4.76□□□□□ -1.65
VCAM1-202ENST00000347652 GLB1L2Q8IW92 636 aa4.76□□□□□ -1.65
VCAM1-202ENST00000347652 METTL4Q8N3J2 472 aa4.76□□□□□ -1.65
VCAM1-202ENST00000347652 ZNF655Q8N720 491 aaPredicted RBP4.76□□□□□ -1.65
VCAM1-202ENST00000347652 BMPERQ8N8U9 685 aa4.76□□□□□ -1.65
VCAM1-202ENST00000347652 OR52J3Q8NH60 311 aa4.76□□□□□ -1.65
VCAM1-202ENST00000347652 SLC2A12Q8TD20 617 aa4.76□□□□□ -1.65
VCAM1-202ENST00000347652 LIN37Q96GY3 246 aaPredicted RBP4.76□□□□□ -1.65
VCAM1-202ENST00000347652 PPP3R2Q96LZ3 170 aa4.76□□□□□ -1.65
VCAM1-202ENST00000347652 OR6C1Q96RD1 312 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms