RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 UGT2A1Q9Y4X1 527 aa18.28■□□□□ 0.52
HDAC4-201ENST00000345617 TGM5O43548 720 aa18.28■□□□□ 0.52
HDAC4-201ENST00000345617 TSFMP43897 325 aaKnown RBP18.28■□□□□ 0.52
HDAC4-201ENST00000345617 OR4K15Q8NH41 348 aa18.28■□□□□ 0.52
HDAC4-201ENST00000345617 ZCCHC4Q9H5U6 513 aa18.28■□□□□ 0.52
HDAC4-201ENST00000345617 SERTAD4Q9NUC0 356 aa18.28■□□□□ 0.52
HDAC4-201ENST00000345617 PPP1R14DQ9NXH3 145 aa18.28■□□□□ 0.52
HDAC4-201ENST00000345617 SLC14A2Q15849 920 aa18.28■□□□□ 0.52
HDAC4-201ENST00000345617 UNC50Q53HI1 259 aa18.28■□□□□ 0.52
HDAC4-201ENST00000345617 APOOLQ6UXV4 268 aa18.28■□□□□ 0.52
HDAC4-201ENST00000345617 SLAIN1Q8ND83 568 aa18.28■□□□□ 0.52
HDAC4-201ENST00000345617 SOX17Q9H6I2 414 aaPredicted RBP18.28■□□□□ 0.52
HDAC4-201ENST00000345617 MRPL15Q9P015 296 aaKnown RBP18.28■□□□□ 0.52
HDAC4-201ENST00000345617 TCRBV3S1A0A5B6 114 aa18.28■□□□□ 0.52
HDAC4-201ENST00000345617 HLA-DOBP13765 273 aa18.28■□□□□ 0.52
HDAC4-201ENST00000345617 OR4D2P58180 307 aa18.28■□□□□ 0.52
HDAC4-201ENST00000345617 FIGNL1Q6PIW4 674 aa18.28■□□□□ 0.52
HDAC4-201ENST00000345617 NXPE4Q6UWF7 544 aa18.28■□□□□ 0.52
HDAC4-201ENST00000345617 DTWD1Q8N5C7 304 aa18.28■□□□□ 0.52
HDAC4-201ENST00000345617 AHCTF1Q8WYP5 2266 aa18.28■□□□□ 0.52
HDAC4-201ENST00000345617 FAM221BA6H8Z2 402 aa18.28■□□□□ 0.52
HDAC4-201ENST00000345617 GPRIN2O60269 458 aa18.28■□□□□ 0.52
HDAC4-201ENST00000345617 NRLP54845 237 aa18.28■□□□□ 0.52
HDAC4-201ENST00000345617 RBM39Q14498 530 aaKnown RBP18.28■□□□□ 0.52
HDAC4-201ENST00000345617 ENTHD1Q8IYW4 607 aa18.28■□□□□ 0.52
HDAC4-201ENST00000345617 SLC5A8Q8N695 610 aa18.28■□□□□ 0.52
HDAC4-201ENST00000345617 C15orf54Q8N8G6 183 aa18.28■□□□□ 0.52
HDAC4-201ENST00000345617 OR9A2Q8NGT5 310 aa18.28■□□□□ 0.52
HDAC4-201ENST00000345617 COPS3Q9UNS2 423 aa18.28■□□□□ 0.52
HDAC4-201ENST00000345617 RAB11AP62491 216 aa18.28■□□□□ 0.52
HDAC4-201ENST00000345617 NRMQ8IXM6 262 aa18.28■□□□□ 0.52
HDAC4-201ENST00000345617 OR10K1Q8NGX5 313 aa18.28■□□□□ 0.52
HDAC4-201ENST00000345617 STRADBQ9C0K7 418 aa18.28■□□□□ 0.52
HDAC4-201ENST00000345617 RNF150Q9ULK6 438 aa18.28■□□□□ 0.52
HDAC4-201ENST00000345617 ACP2P11117 423 aa18.28■□□□□ 0.52
HDAC4-201ENST00000345617 RPL13AP40429 203 aaKnown RBP18.28■□□□□ 0.52
HDAC4-201ENST00000345617 MGAT3Q09327 533 aa18.28■□□□□ 0.52
HDAC4-201ENST00000345617 FN3KRPQ9HA64 309 aa18.28■□□□□ 0.52
HDAC4-201ENST00000345617 LOC102723532A0A0G2JNH3 316 aa18.27■□□□□ 0.52
HDAC4-201ENST00000345617 POU3F4P49335 361 aa18.27■□□□□ 0.52
HDAC4-201ENST00000345617 ARRB1P49407 418 aaPredicted RBP18.27■□□□□ 0.52
HDAC4-201ENST00000345617 LBX2Q6XYB7 198 aa18.27■□□□□ 0.52
HDAC4-201ENST00000345617 Q6ZVU0 165 aa18.27■□□□□ 0.52
HDAC4-201ENST00000345617 VASH1Q7L8A9 365 aaPredicted RBP18.27■□□□□ 0.52
HDAC4-201ENST00000345617 SLC51BQ86UW2 128 aa18.27■□□□□ 0.52
HDAC4-201ENST00000345617 FAM217AQ8IXS0 508 aa18.27■□□□□ 0.52
HDAC4-201ENST00000345617 RTP4Q96DX8 246 aa18.27■□□□□ 0.52
HDAC4-201ENST00000345617 PAPOLGQ9BWT3 736 aaKnown RBP18.27■□□□□ 0.52
HDAC4-201ENST00000345617 A3GALT2U3KPV4 340 aa18.27■□□□□ 0.52
HDAC4-201ENST00000345617 TOX4O94842 621 aa18.27■□□□□ 0.52
HDAC4-201ENST00000345617 MRPL10Q7Z7H8 261 aaKnown RBP18.27■□□□□ 0.52
HDAC4-201ENST00000345617 MMABQ96EY8 250 aaPredicted RBP18.27■□□□□ 0.52
HDAC4-201ENST00000345617 UBL7Q96S82 380 aaPredicted RBP18.27■□□□□ 0.52
HDAC4-201ENST00000345617 DNAJC15Q9Y5T4 150 aa18.27■□□□□ 0.52
HDAC4-201ENST00000345617 DDCP20711 480 aa18.27■□□□□ 0.52
HDAC4-201ENST00000345617 FBLP22087 321 aaKnown RBP18.27■□□□□ 0.52
HDAC4-201ENST00000345617 CPOXP36551 454 aa18.27■□□□□ 0.52
HDAC4-201ENST00000345617 CCL23P55773 120 aa18.27■□□□□ 0.52
HDAC4-201ENST00000345617 HABP2Q14520 560 aaPredicted RBP18.27■□□□□ 0.52
HDAC4-201ENST00000345617 SYNPO2LQ9H987 977 aa18.27■□□□□ 0.52
HDAC4-201ENST00000345617 MT-ND4LP03901 98 aa18.27■□□□□ 0.52
HDAC4-201ENST00000345617 GRM2Q14416 872 aa18.27■□□□□ 0.52
HDAC4-201ENST00000345617 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.27■□□□□ 0.52
HDAC4-201ENST00000345617 NLRP8Q86W28 1048 aa18.27■□□□□ 0.52
HDAC4-201ENST00000345617 UMODL1-AS1Q8N2C9 162 aa18.27■□□□□ 0.52
HDAC4-201ENST00000345617 BCAS3Q9H6U6 928 aa18.27■□□□□ 0.52
HDAC4-201ENST00000345617 GABRB3P28472 473 aa18.27■□□□□ 0.51
HDAC4-201ENST00000345617 PCBD1P61457 104 aa18.27■□□□□ 0.51
HDAC4-201ENST00000345617 ELOCQ15369 112 aa18.27■□□□□ 0.51
HDAC4-201ENST00000345617 OR7G3Q8NG95 312 aa18.27■□□□□ 0.51
HDAC4-201ENST00000345617 ZNF516Q92618 1163 aa18.27■□□□□ 0.51
HDAC4-201ENST00000345617 FGGYQ96C11 551 aa18.27■□□□□ 0.51
HDAC4-201ENST00000345617 ICMTO60725 284 aa18.27■□□□□ 0.51
HDAC4-201ENST00000345617 ADAM23O75077 832 aa18.27■□□□□ 0.51
HDAC4-201ENST00000345617 PREPP48147 710 aa18.27■□□□□ 0.51
HDAC4-201ENST00000345617 TIGD5Q53EQ6 642 aa18.27■□□□□ 0.51
HDAC4-201ENST00000345617 TAS1R3Q7RTX0 852 aa18.27■□□□□ 0.51
HDAC4-201ENST00000345617 GAB3Q8WWW8 586 aa18.27■□□□□ 0.51
HDAC4-201ENST00000345617 DPH2Q9BQC3 489 aaPredicted RBP18.27■□□□□ 0.51
HDAC4-201ENST00000345617 GMEB2Q9UKD1 530 aa18.27■□□□□ 0.51
HDAC4-201ENST00000345617 EXO1Q9UQ84 846 aaKnown RBP18.27■□□□□ 0.51
HDAC4-201ENST00000345617 A8MUA0 341 aa18.26■□□□□ 0.51
HDAC4-201ENST00000345617 ACY1Q03154 408 aa18.26■□□□□ 0.51
HDAC4-201ENST00000345617 NAA40Q86UY6 237 aa18.26■□□□□ 0.51
HDAC4-201ENST00000345617 GLIS2Q9BZE0 524 aaPredicted RBP18.26■□□□□ 0.51
HDAC4-201ENST00000345617 PDE7BQ9NP56 450 aa18.26■□□□□ 0.51
HDAC4-201ENST00000345617 DLX2Q07687 328 aaPredicted RBP18.26■□□□□ 0.51
HDAC4-201ENST00000345617 RPL22L1Q6P5R6 122 aaKnown RBP18.26■□□□□ 0.51
HDAC4-201ENST00000345617 BAGE3Q86Y29 109 aa18.26■□□□□ 0.51
HDAC4-201ENST00000345617 BAGE2Q86Y30 109 aa18.26■□□□□ 0.51
HDAC4-201ENST00000345617 OR56B1Q8NGI3 324 aa18.26■□□□□ 0.51
HDAC4-201ENST00000345617 NME4O00746 187 aa18.26■□□□□ 0.51
HDAC4-201ENST00000345617 KIAA0355O15063 1070 aa18.26■□□□□ 0.51
HDAC4-201ENST00000345617 PLGLAQ15195 96 aa18.26■□□□□ 0.51
HDAC4-201ENST00000345617 SUSD1Q6UWL2 747 aa18.26■□□□□ 0.51
HDAC4-201ENST00000345617 SLC43A1O75387 559 aa18.26■□□□□ 0.51
HDAC4-201ENST00000345617 HTRA4P83105 476 aaPredicted RBP18.26■□□□□ 0.51
HDAC4-201ENST00000345617 PRKCZQ05513 592 aa18.26■□□□□ 0.51
HDAC4-201ENST00000345617 SPCS2Q15005 226 aa18.26■□□□□ 0.51
HDAC4-201ENST00000345617 AAK1Q2M2I8 961 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms