RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 TMEM181Q9P2C4 612 aa15.3■□□□□ 0.04
SMARCA4-201ENST00000344626 PCDHGB6Q9Y5F9 930 aa15.3■□□□□ 0.04
SMARCA4-201ENST00000344626 PLXNB2O15031 1838 aa15.3■□□□□ 0.04
SMARCA4-201ENST00000344626 ST3GAL4Q11206 333 aa15.3■□□□□ 0.04
SMARCA4-201ENST00000344626 CBX3Q13185 183 aa15.3■□□□□ 0.04
SMARCA4-201ENST00000344626 ACBD7Q8N6N7 88 aa15.3■□□□□ 0.04
SMARCA4-201ENST00000344626 POLE3Q9NRF9 147 aa15.3■□□□□ 0.04
SMARCA4-201ENST00000344626 DCAF13Q9NV06 445 aaKnown RBP15.3■□□□□ 0.04
SMARCA4-201ENST00000344626 H0YJX3 145 aa15.3■□□□□ 0.04
SMARCA4-201ENST00000344626 I6L893 689 aaPredicted RBP15.3■□□□□ 0.04
SMARCA4-201ENST00000344626 NSA2O95478 260 aaKnown RBP15.3■□□□□ 0.04
SMARCA4-201ENST00000344626 OCLNQ16625 522 aa15.3■□□□□ 0.04
SMARCA4-201ENST00000344626 ZNF585AQ6P3V2 769 aa15.3■□□□□ 0.04
SMARCA4-201ENST00000344626 ENDOVQ8N8Q3 282 aaKnown RBP15.3■□□□□ 0.04
SMARCA4-201ENST00000344626 BOLLQ8N9W6 283 aaKnown RBP15.3■□□□□ 0.04
SMARCA4-201ENST00000344626 CHTF18Q8WVB6 975 aa15.3■□□□□ 0.04
SMARCA4-201ENST00000344626 MENTQ9BUN1 341 aa15.3■□□□□ 0.04
SMARCA4-201ENST00000344626 WDR37Q9Y2I8 494 aa15.3■□□□□ 0.04
SMARCA4-201ENST00000344626 LRIT2A6NDA9 550 aa15.3■□□□□ 0.04
SMARCA4-201ENST00000344626 TRA2AQ13595 282 aaKnown RBP eCLIP15.3■□□□□ 0.048e-8■■■□□ 15.5
SMARCA4-201ENST00000344626 MAD2L1BPQ15013 274 aaPredicted RBP15.3■□□□□ 0.04
SMARCA4-201ENST00000344626 DTWD1Q8N5C7 304 aa15.3■□□□□ 0.04
SMARCA4-201ENST00000344626 CPOXP36551 454 aa15.29■□□□□ 0.04
SMARCA4-201ENST00000344626 HAVCR2Q8TDQ0 301 aa15.29■□□□□ 0.04
SMARCA4-201ENST00000344626 TMEM41AQ96HV5 264 aa15.29■□□□□ 0.04
SMARCA4-201ENST00000344626 ZNF337Q9Y3M9 751 aa15.29■□□□□ 0.04
SMARCA4-201ENST00000344626 CSNK1G3Q9Y6M4 447 aa15.29■□□□□ 0.04
SMARCA4-201ENST00000344626 DLEC1Q9Y238 1755 aa15.29■□□□□ 0.04
SMARCA4-201ENST00000344626 DSCR3O14972 297 aa15.29■□□□□ 0.04
SMARCA4-201ENST00000344626 ADAM23O75077 832 aa15.29■□□□□ 0.04
SMARCA4-201ENST00000344626 PPP1R3DO95685 299 aa15.29■□□□□ 0.04
SMARCA4-201ENST00000344626 GCH1P30793 250 aa15.29■□□□□ 0.04
SMARCA4-201ENST00000344626 EIF1P41567 113 aaKnown RBP15.29■□□□□ 0.04
SMARCA4-201ENST00000344626 ZNF773Q6PK81 442 aa15.29■□□□□ 0.04
SMARCA4-201ENST00000344626 ACOT12Q8WYK0 555 aa15.29■□□□□ 0.04
SMARCA4-201ENST00000344626 PIGQQ9BRB3 760 aa15.29■□□□□ 0.04
SMARCA4-201ENST00000344626 GINS4Q9BRT9 223 aa15.29■□□□□ 0.04
SMARCA4-201ENST00000344626 GORASP2Q9H8Y8 452 aa15.29■□□□□ 0.04
SMARCA4-201ENST00000344626 GLP1RP43220 463 aa15.29■□□□□ 0.04
SMARCA4-201ENST00000344626 TUBA1BP68363 451 aa15.29■□□□□ 0.04
SMARCA4-201ENST00000344626 TUBA4AP68366 448 aa15.29■□□□□ 0.04
SMARCA4-201ENST00000344626 OLFML2AQ68BL7 652 aa15.29■□□□□ 0.04
SMARCA4-201ENST00000344626 TUBA1AQ71U36 451 aa15.29■□□□□ 0.04
SMARCA4-201ENST00000344626 DUSP19Q8WTR2 217 aa15.29■□□□□ 0.04
SMARCA4-201ENST00000344626 ACOT11Q8WXI4 607 aaPredicted RBP15.29■□□□□ 0.04
SMARCA4-201ENST00000344626 GTF2H4Q92759 462 aa15.29■□□□□ 0.04
SMARCA4-201ENST00000344626 SENP5Q96HI0 755 aaPredicted RBP15.29■□□□□ 0.04
SMARCA4-201ENST00000344626 NMNAT1Q9HAN9 279 aaPredicted RBP15.29■□□□□ 0.04
SMARCA4-201ENST00000344626 TRPM6Q9BX84 2022 aa15.29■□□□□ 0.04
SMARCA4-201ENST00000344626 ARAFP10398 606 aa15.29■□□□□ 0.04
SMARCA4-201ENST00000344626 HOXD12P35452 270 aa15.29■□□□□ 0.04
SMARCA4-201ENST00000344626 POLR2HP52434 150 aaKnown RBP15.29■□□□□ 0.04
SMARCA4-201ENST00000344626 CBLBQ13191 982 aa15.29■□□□□ 0.04
SMARCA4-201ENST00000344626 ZBED5Q49AG3 693 aa15.29■□□□□ 0.04
SMARCA4-201ENST00000344626 FAM217AQ8IXS0 508 aa15.29■□□□□ 0.04
SMARCA4-201ENST00000344626 ELP5Q8TE02 316 aa15.29■□□□□ 0.04
SMARCA4-201ENST00000344626 SAMD8Q96LT4 415 aa15.29■□□□□ 0.04
SMARCA4-201ENST00000344626 TTTY10Q9BZA0 68 aa15.29■□□□□ 0.04
SMARCA4-201ENST00000344626 ZNF71Q9NQZ8 489 aaPredicted RBP15.29■□□□□ 0.04
SMARCA4-201ENST00000344626 CARD8Q9Y2G2 431 aa15.29■□□□□ 0.04
SMARCA4-201ENST00000344626 SH3D21A4FU49 640 aa15.28■□□□□ 0.04
SMARCA4-201ENST00000344626 HOXC4P09017 264 aaPredicted RBP15.28■□□□□ 0.04
SMARCA4-201ENST00000344626 OR8S1Q8NH09 359 aa15.28■□□□□ 0.04
SMARCA4-201ENST00000344626 MUCL1Q96DR8 90 aa15.28■□□□□ 0.04
SMARCA4-201ENST00000344626 DHRS1Q96LJ7 313 aa15.28■□□□□ 0.04
SMARCA4-201ENST00000344626 GPR160Q9UJ42 338 aa15.28■□□□□ 0.04
SMARCA4-201ENST00000344626 EMC9Q9Y3B6 208 aa15.28■□□□□ 0.04
SMARCA4-201ENST00000344626 RGPD3A6NKT7 1758 aaPredicted RBP15.28■□□□□ 0.04
SMARCA4-201ENST00000344626 hCG_1807616A0A1W2PRN6 198 aa15.28■□□□□ 0.04
SMARCA4-201ENST00000344626 SERINC4A6NH21 518 aa15.28■□□□□ 0.04
SMARCA4-201ENST00000344626 HSPA12AO43301 675 aa15.28■□□□□ 0.04
SMARCA4-201ENST00000344626 SNAP29O95721 258 aa15.28■□□□□ 0.04
SMARCA4-201ENST00000344626 CD79AP11912 226 aa15.28■□□□□ 0.04
SMARCA4-201ENST00000344626 ARPC4P59998 168 aa15.28■□□□□ 0.04
SMARCA4-201ENST00000344626 APOFQ13790 326 aa15.28■□□□□ 0.04
SMARCA4-201ENST00000344626 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.28■□□□□ 0.04
SMARCA4-201ENST00000344626 BCL2L15Q5TBC7 163 aa15.28■□□□□ 0.04
SMARCA4-201ENST00000344626 MS4A6EQ96DS6 147 aa15.28■□□□□ 0.04
SMARCA4-201ENST00000344626 S1PR5Q9H228 398 aa15.28■□□□□ 0.04
SMARCA4-201ENST00000344626 SLC22A7Q9Y694 548 aa15.28■□□□□ 0.04
SMARCA4-201ENST00000344626 PTHP01270 115 aa15.28■□□□□ 0.04
SMARCA4-201ENST00000344626 SP9P0CG40 484 aa15.28■□□□□ 0.04
SMARCA4-201ENST00000344626 GLO1Q04760 184 aa15.28■□□□□ 0.04
SMARCA4-201ENST00000344626 OR1Q1Q15612 314 aa15.28■□□□□ 0.04
SMARCA4-201ENST00000344626 VASH2Q86V25 355 aa15.28■□□□□ 0.04
SMARCA4-201ENST00000344626 ZNF611Q8N823 705 aa15.28■□□□□ 0.04
SMARCA4-201ENST00000344626 TNFAIP8L1Q8WVP5 186 aa15.28■□□□□ 0.04
SMARCA4-201ENST00000344626 S100A16Q96FQ6 103 aaKnown RBP15.28■□□□□ 0.04
SMARCA4-201ENST00000344626 PPIL1Q9Y3C6 166 aa15.28■□□□□ 0.04
SMARCA4-201ENST00000344626 SYPL1Q16563 259 aa15.28■□□□□ 0.04
SMARCA4-201ENST00000344626 HSD17B12Q53GQ0 312 aa15.28■□□□□ 0.04
SMARCA4-201ENST00000344626 C9orf135Q5VTT2 229 aa15.28■□□□□ 0.04
SMARCA4-201ENST00000344626 TP53I13Q8NBR0 393 aaPredicted RBP15.28■□□□□ 0.04
SMARCA4-201ENST00000344626 ANKK1Q8NFD2 765 aa15.28■□□□□ 0.04
SMARCA4-201ENST00000344626 BPIFA2Q96DR5 249 aa15.28■□□□□ 0.04
SMARCA4-201ENST00000344626 MUS81Q96NY9 551 aa15.28■□□□□ 0.04
SMARCA4-201ENST00000344626 TNFRSF1BP20333 461 aa15.27■□□□□ 0.04
SMARCA4-201ENST00000344626 MSX1P28360 303 aa15.27■□□□□ 0.04
SMARCA4-201ENST00000344626 BHLHA9Q7RTU4 235 aa15.27■□□□□ 0.04
SMARCA4-201ENST00000344626 VRK2Q86Y07 508 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms