RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 DYNC2LI1Q8TCX1 351 aa13.54□□□□□ -0.24
CXCL12-201ENST00000343575 YIPF6Q96EC8 236 aa13.54□□□□□ -0.24
CXCL12-201ENST00000343575 LCORQ96JN0 433 aaPredicted RBP13.54□□□□□ -0.24
CXCL12-201ENST00000343575 GAL3ST4Q96RP7 486 aa13.54□□□□□ -0.24
CXCL12-201ENST00000343575 ZNF700Q9H0M5 742 aa13.54□□□□□ -0.24
CXCL12-201ENST00000343575 RLIMQ9NVW2 624 aa13.54□□□□□ -0.24
CXCL12-201ENST00000343575 COPS7AQ9UBW8 275 aa13.54□□□□□ -0.24
CXCL12-201ENST00000343575 CFL2Q9Y281 166 aa13.54□□□□□ -0.24
CXCL12-201ENST00000343575 FARSAQ9Y285 508 aaKnown RBP13.54□□□□□ -0.24
CXCL12-201ENST00000343575 CELSR3Q9NYQ7 3312 aa13.53□□□□□ -0.24
CXCL12-201ENST00000343575 OR6C76A6NM76 312 aa13.53□□□□□ -0.24
CXCL12-201ENST00000343575 FAM47E-STBD1D6RA91 191 aa13.53□□□□□ -0.24
CXCL12-201ENST00000343575 MASP2O00187 686 aa13.53□□□□□ -0.24
CXCL12-201ENST00000343575 GNGT2O14610 69 aa13.53□□□□□ -0.24
CXCL12-201ENST00000343575 RAD1O60671 282 aa13.53□□□□□ -0.24
CXCL12-201ENST00000343575 LGI1O95970 557 aa13.53□□□□□ -0.24
CXCL12-201ENST00000343575 CST1P01037 141 aa13.53□□□□□ -0.24
CXCL12-201ENST00000343575 FABP3P05413 133 aa13.53□□□□□ -0.24
CXCL12-201ENST00000343575 PPP1R8Q12972 351 aaKnown RBP13.53□□□□□ -0.24
CXCL12-201ENST00000343575 KCNAB2Q13303 367 aa13.53□□□□□ -0.24
CXCL12-201ENST00000343575 DESI1Q6ICB0 168 aa13.53□□□□□ -0.24
CXCL12-201ENST00000343575 PPP1R32Q7Z5V6 425 aa13.53□□□□□ -0.24
CXCL12-201ENST00000343575 TMEM179BQ7Z7N9 219 aa13.53□□□□□ -0.24
CXCL12-201ENST00000343575 AKAP14Q86UN6 197 aa13.53□□□□□ -0.24
CXCL12-201ENST00000343575 TSPYL5Q86VY4 417 aaPredicted RBP13.53□□□□□ -0.24
CXCL12-201ENST00000343575 DTX1Q86Y01 620 aa13.53□□□□□ -0.24
CXCL12-201ENST00000343575 OR11G2Q8NGC1 345 aa13.53□□□□□ -0.24
CXCL12-201ENST00000343575 OR52P1PQ8NH57 321 aa13.53□□□□□ -0.24
CXCL12-201ENST00000343575 FAR1Q8WVX9 515 aa13.53□□□□□ -0.24
CXCL12-201ENST00000343575 ZNF354BQ96LW1 612 aa13.53□□□□□ -0.24
CXCL12-201ENST00000343575 POLE3Q9NRF9 147 aa13.53□□□□□ -0.24
CXCL12-201ENST00000343575 C19orf25Q9UFG5 118 aaPredicted RBP13.53□□□□□ -0.24
CXCL12-201ENST00000343575 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.53□□□□□ -0.24
CXCL12-201ENST00000343575 J3KTA2 159 aa13.53□□□□□ -0.24
CXCL12-201ENST00000343575 FFAR1O14842 300 aa13.53□□□□□ -0.24
CXCL12-201ENST00000343575 RGS13O14921 159 aa13.53□□□□□ -0.24
CXCL12-201ENST00000343575 TO15178 435 aa13.53□□□□□ -0.24
CXCL12-201ENST00000343575 TPST2O60704 377 aa13.53□□□□□ -0.24
CXCL12-201ENST00000343575 ALPPP05187 535 aa13.53□□□□□ -0.24
CXCL12-201ENST00000343575 CELA2AP08217 269 aa13.53□□□□□ -0.24
CXCL12-201ENST00000343575 BMP4P12644 408 aa13.53□□□□□ -0.24
CXCL12-201ENST00000343575 RFX3P48380 749 aa13.53□□□□□ -0.24
CXCL12-201ENST00000343575 EEF1A1P68104 462 aaKnown RBP13.53□□□□□ -0.24
CXCL12-201ENST00000343575 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.53□□□□□ -0.24
CXCL12-201ENST00000343575 RSPO4Q2I0M5 234 aaPredicted RBP13.53□□□□□ -0.24
CXCL12-201ENST00000343575 CTU2Q2VPK5 515 aaKnown RBP13.53□□□□□ -0.24
CXCL12-201ENST00000343575 ZNF311Q5JNZ3 666 aa13.53□□□□□ -0.24
CXCL12-201ENST00000343575 ZNF362Q5T0B9 420 aaPredicted RBP13.53□□□□□ -0.24
CXCL12-201ENST00000343575 C17orf47Q8NEP4 570 aa13.53□□□□□ -0.24
CXCL12-201ENST00000343575 OR4C3Q8NH37 302 aa13.53□□□□□ -0.24
CXCL12-201ENST00000343575 ELP5Q8TE02 316 aa13.53□□□□□ -0.24
CXCL12-201ENST00000343575 GEMIN6Q8WXD5 167 aaKnown RBP13.53□□□□□ -0.24
CXCL12-201ENST00000343575 NKD1Q969G9 470 aa13.53□□□□□ -0.24
CXCL12-201ENST00000343575 DACH2Q96NX9 599 aa13.53□□□□□ -0.24
CXCL12-201ENST00000343575 PINK1Q9BXM7 581 aa13.53□□□□□ -0.24
CXCL12-201ENST00000343575 MMP27Q9H306 513 aa13.53□□□□□ -0.24
CXCL12-201ENST00000343575 DUSP21Q9H596 190 aa13.53□□□□□ -0.24
CXCL12-201ENST00000343575 THSD1Q9NS62 852 aa13.53□□□□□ -0.24
CXCL12-201ENST00000343575 FLRT3Q9NZU0 649 aa13.53□□□□□ -0.24
CXCL12-201ENST00000343575 CDV3Q9UKY7 258 aaKnown RBP13.53□□□□□ -0.24
CXCL12-201ENST00000343575 MAGED1Q9Y5V3 778 aaPredicted RBP13.53□□□□□ -0.24
CXCL12-201ENST00000343575 DCDC2BA2VCK2 349 aa13.52□□□□□ -0.25
CXCL12-201ENST00000343575 STMND1H3BQB6 276 aa13.52□□□□□ -0.25
CXCL12-201ENST00000343575 INMTO95050 263 aa13.52□□□□□ -0.25
CXCL12-201ENST00000343575 CD63P08962 238 aa13.52□□□□□ -0.25
CXCL12-201ENST00000343575 PRKAR1BP31321 381 aa13.52□□□□□ -0.25
CXCL12-201ENST00000343575 RNF144AP50876 292 aaPredicted RBP13.52□□□□□ -0.25
CXCL12-201ENST00000343575 NR0B1P51843 470 aaKnown RBP13.52□□□□□ -0.25
CXCL12-201ENST00000343575 CSNK2BP67870 215 aa13.52□□□□□ -0.25
CXCL12-201ENST00000343575 EMX1Q04741 257 aaPredicted RBP13.52□□□□□ -0.25
CXCL12-201ENST00000343575 SELENBP1Q13228 472 aa13.52□□□□□ -0.25
CXCL12-201ENST00000343575 DNASE1L3Q13609 305 aa13.52□□□□□ -0.25
CXCL12-201ENST00000343575 KEAP1Q14145 624 aa13.52□□□□□ -0.25
CXCL12-201ENST00000343575 NPTX1Q15818 432 aa13.52□□□□□ -0.25
CXCL12-201ENST00000343575 TCTN3Q6NUS6 607 aa13.52□□□□□ -0.25
CXCL12-201ENST00000343575 HSDL2Q6YN16 418 aa13.52□□□□□ -0.25
CXCL12-201ENST00000343575 ZNF836Q6ZNA1 936 aa13.52□□□□□ -0.25
CXCL12-201ENST00000343575 PRR22Q8IZ63 422 aa13.52□□□□□ -0.25
CXCL12-201ENST00000343575 RASSF5Q8WWW0 418 aa13.52□□□□□ -0.25
CXCL12-201ENST00000343575 ZNF300Q96RE9 604 aaPredicted RBP13.52□□□□□ -0.25
CXCL12-201ENST00000343575 SPATA5L1Q9BVQ7 753 aa13.52□□□□□ -0.25
CXCL12-201ENST00000343575 ZNF229Q9UJW7 825 aa13.52□□□□□ -0.25
CXCL12-201ENST00000343575 ZNF443Q9Y2A4 671 aaPredicted RBP13.52□□□□□ -0.25
CXCL12-201ENST00000343575 OR10H1Q9Y4A9 318 aa13.52□□□□□ -0.25
CXCL12-201ENST00000343575 TESMINQ9Y4I5 508 aa13.52□□□□□ -0.25
CXCL12-201ENST00000343575 MRPS18BQ9Y676 258 aaKnown RBP13.52□□□□□ -0.25
CXCL12-201ENST00000343575 M0R3H8 397 aa13.51□□□□□ -0.25
CXCL12-201ENST00000343575 SYT5O00445 386 aa13.51□□□□□ -0.25
CXCL12-201ENST00000343575 BCKDKO14874 412 aa13.51□□□□□ -0.25
CXCL12-201ENST00000343575 UPK1BO75841 260 aa13.51□□□□□ -0.25
CXCL12-201ENST00000343575 IL33O95760 270 aa13.51□□□□□ -0.25
CXCL12-201ENST00000343575 PTTG1O95997 202 aa13.51□□□□□ -0.25
CXCL12-201ENST00000343575 UGT2B10P36537 528 aa13.51□□□□□ -0.25
CXCL12-201ENST00000343575 DLSTP36957 453 aa13.51□□□□□ -0.25
CXCL12-201ENST00000343575 DCAF7P61962 342 aa13.51□□□□□ -0.25
CXCL12-201ENST00000343575 IFITM3Q01628 133 aa13.51□□□□□ -0.25
CXCL12-201ENST00000343575 CDK5R2Q13319 367 aa13.51□□□□□ -0.25
CXCL12-201ENST00000343575 IL10RAQ13651 578 aa13.51□□□□□ -0.25
CXCL12-201ENST00000343575 SSPNQ14714 243 aa13.51□□□□□ -0.25
CXCL12-201ENST00000343575 FLYWCH1Q4VC44 716 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms