RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 KANTRA0A1W2PQU2 76 aa17.27■□□□□ 0.36
SMPD1-201ENST00000342245 F5H5T6 163 aa17.27■□□□□ 0.36
SMPD1-201ENST00000342245 J3QRE1 110 aa17.27■□□□□ 0.36
SMPD1-201ENST00000342245 BCHEP06276 602 aa17.27■□□□□ 0.36
SMPD1-201ENST00000342245 TACR2P21452 398 aa17.27■□□□□ 0.36
SMPD1-201ENST00000342245 NOS3P29474 1203 aa17.27■□□□□ 0.36
SMPD1-201ENST00000342245 PFN3P60673 137 aa17.27■□□□□ 0.36
SMPD1-201ENST00000342245 TSPAN31Q12999 210 aa17.27■□□□□ 0.36
SMPD1-201ENST00000342245 FZD5Q13467 585 aa17.27■□□□□ 0.36
SMPD1-201ENST00000342245 RTP2Q5QGT7 225 aa17.27■□□□□ 0.36
SMPD1-201ENST00000342245 PRSS45Q7RTY3 260 aa17.27■□□□□ 0.36
SMPD1-201ENST00000342245 SERINC5Q86VE9 423 aa17.27■□□□□ 0.36
SMPD1-201ENST00000342245 ZFP82Q8N141 532 aa17.27■□□□□ 0.36
SMPD1-201ENST00000342245 WDSUB1Q8N9V3 476 aa17.27■□□□□ 0.36
SMPD1-201ENST00000342245 SPON2Q9BUD6 331 aa17.27■□□□□ 0.36
SMPD1-201ENST00000342245 EGLN3Q9H6Z9 239 aa17.27■□□□□ 0.36
SMPD1-201ENST00000342245 METTL1Q9UBP6 276 aaKnown RBP17.27■□□□□ 0.36
SMPD1-201ENST00000342245 NLRC5Q86WI3 1866 aa17.27■□□□□ 0.36
SMPD1-201ENST00000342245 ANKRD20A5PA0PJZ0 165 aa17.27■□□□□ 0.35
SMPD1-201ENST00000342245 DBX1A6NMT0 343 aa17.27■□□□□ 0.35
SMPD1-201ENST00000342245 MCIDASD6RGH6 385 aa17.27■□□□□ 0.35
SMPD1-201ENST00000342245 GAPDHSO14556 408 aaPredicted RBP17.27■□□□□ 0.35
SMPD1-201ENST00000342245 IL3P08700 152 aa17.27■□□□□ 0.35
SMPD1-201ENST00000342245 ZNF35P13682 527 aa17.27■□□□□ 0.35
SMPD1-201ENST00000342245 ANXA7P20073 488 aaKnown RBP17.27■□□□□ 0.35
SMPD1-201ENST00000342245 CD22P20273 847 aa17.27■□□□□ 0.35
SMPD1-201ENST00000342245 HCCSP53701 268 aa17.27■□□□□ 0.35
SMPD1-201ENST00000342245 BLOC1S1P78537 153 aa17.27■□□□□ 0.35
SMPD1-201ENST00000342245 PIN1Q13526 163 aaPredicted RBP17.27■□□□□ 0.35
SMPD1-201ENST00000342245 HABP2Q14520 560 aaPredicted RBP17.27■□□□□ 0.35
SMPD1-201ENST00000342245 ZNF345Q14585 488 aa17.27■□□□□ 0.35
SMPD1-201ENST00000342245 NUDT18Q6ZVK8 323 aa17.27■□□□□ 0.35
SMPD1-201ENST00000342245 GID4Q8IVV7 300 aa17.27■□□□□ 0.35
SMPD1-201ENST00000342245 ZNF565Q8N9K5 539 aa17.27■□□□□ 0.35
SMPD1-201ENST00000342245 OR2AK2Q8NG84 335 aa17.27■□□□□ 0.35
SMPD1-201ENST00000342245 CLP1Q92989 425 aaKnown RBP17.27■□□□□ 0.35
SMPD1-201ENST00000342245 TMEM19Q96HH6 336 aa17.27■□□□□ 0.35
SMPD1-201ENST00000342245 ALG8Q9BVK2 526 aa17.27■□□□□ 0.35
SMPD1-201ENST00000342245 STARD7Q9NQZ5 370 aa17.27■□□□□ 0.35
SMPD1-201ENST00000342245 SURF4O15260 269 aa17.26■□□□□ 0.35
SMPD1-201ENST00000342245 IGLV3-27P01718 113 aa17.26■□□□□ 0.35
SMPD1-201ENST00000342245 MT-ND5P03915 603 aa17.26■□□□□ 0.35
SMPD1-201ENST00000342245 EPXP11678 715 aa17.26■□□□□ 0.35
SMPD1-201ENST00000342245 FNTBP49356 437 aa17.26■□□□□ 0.35
SMPD1-201ENST00000342245 P2RY4P51582 365 aa17.26■□□□□ 0.35
SMPD1-201ENST00000342245 CDH4P55283 916 aa17.26■□□□□ 0.35
SMPD1-201ENST00000342245 H2BFSP57053 126 aa17.26■□□□□ 0.35
SMPD1-201ENST00000342245 RPS26P11Q5JNZ5 115 aaPredicted RBP17.26■□□□□ 0.35
SMPD1-201ENST00000342245 SEC11CQ9BY50 192 aa17.26■□□□□ 0.35
SMPD1-201ENST00000342245 CLEC4AQ9UMR7 237 aa17.26■□□□□ 0.35
SMPD1-201ENST00000342245 PLXNA3P51805 1871 aa17.26■□□□□ 0.35
SMPD1-201ENST00000342245 CXCL11O14625 94 aa17.26■□□□□ 0.35
SMPD1-201ENST00000342245 RDH16O75452 317 aa17.26■□□□□ 0.35
SMPD1-201ENST00000342245 SNRPBP14678 240 aaKnown RBP17.26■□□□□ 0.35
SMPD1-201ENST00000342245 FPR3P25089 353 aa17.26■□□□□ 0.35
SMPD1-201ENST00000342245 PPIAP62937 165 aaKnown RBP17.26■□□□□ 0.35
SMPD1-201ENST00000342245 PTSQ03393 145 aa17.26■□□□□ 0.35
SMPD1-201ENST00000342245 PEA15Q15121 130 aa17.26■□□□□ 0.35
SMPD1-201ENST00000342245 H3F3CQ6NXT2 135 aa17.26■□□□□ 0.35
SMPD1-201ENST00000342245 TSSK4Q6SA08 328 aa17.26■□□□□ 0.35
SMPD1-201ENST00000342245 SCN4BQ8IWT1 228 aa17.26■□□□□ 0.35
SMPD1-201ENST00000342245 NEURL3Q96EH8 262 aa17.26■□□□□ 0.35
SMPD1-201ENST00000342245 PRRC1Q96M27 445 aa17.26■□□□□ 0.35
SMPD1-201ENST00000342245 FCRL4Q96PJ5 515 aa17.26■□□□□ 0.35
SMPD1-201ENST00000342245 SEPT5Q99719 369 aaPredicted RBP17.26■□□□□ 0.35
SMPD1-201ENST00000342245 ISG20L2Q9H9L3 353 aaKnown RBP17.26■□□□□ 0.35
SMPD1-201ENST00000342245 MYNNQ9NPC7 610 aa17.26■□□□□ 0.35
SMPD1-201ENST00000342245 ACSS1Q9NUB1 689 aaPredicted RBP17.26■□□□□ 0.35
SMPD1-201ENST00000342245 CACNG4Q9UBN1 327 aa17.26■□□□□ 0.35
SMPD1-201ENST00000342245 ABHD14A-ACY1A0A1B0GW23 586 aa17.25■□□□□ 0.35
SMPD1-201ENST00000342245 FLRT2O43155 660 aa17.25■□□□□ 0.35
SMPD1-201ENST00000342245 RB1P06400 928 aa17.25■□□□□ 0.35
SMPD1-201ENST00000342245 ZDHHC11BP0C7U3 371 aa17.25■□□□□ 0.35
SMPD1-201ENST00000342245 FAUP35544 74 aaKnown RBP17.25■□□□□ 0.35
SMPD1-201ENST00000342245 GPX4P36969 197 aaPredicted RBP17.25■□□□□ 0.35
SMPD1-201ENST00000342245 ACTR1AP61163 376 aa17.25■□□□□ 0.35
SMPD1-201ENST00000342245 EEF1A1P68104 462 aaKnown RBP17.25■□□□□ 0.35
SMPD1-201ENST00000342245 MELKQ14680 651 aa17.25■□□□□ 0.35
SMPD1-201ENST00000342245 LINC00303Q3SY05 128 aa17.25■□□□□ 0.35
SMPD1-201ENST00000342245 EEF1A1P5Q5VTE0 462 aa17.25■□□□□ 0.35
SMPD1-201ENST00000342245 RBM45Q8IUH3 476 aaKnown RBP17.25■□□□□ 0.35
SMPD1-201ENST00000342245 MISPQ8IVT2 679 aa17.25■□□□□ 0.35
SMPD1-201ENST00000342245 NXPE1Q8N323 547 aa17.25■□□□□ 0.35
SMPD1-201ENST00000342245 EID2BQ96D98 161 aa17.25■□□□□ 0.35
SMPD1-201ENST00000342245 GPA33Q99795 319 aa17.25■□□□□ 0.35
SMPD1-201ENST00000342245 ICKQ9UPZ9 632 aa17.25■□□□□ 0.35
SMPD1-201ENST00000342245 RPH3AQ9Y2J0 694 aaPredicted RBP17.25■□□□□ 0.35
SMPD1-201ENST00000342245 SIRT4Q9Y6E7 314 aaPredicted RBP17.25■□□□□ 0.35
SMPD1-201ENST00000342245 OR2F2O95006 317 aa17.25■□□□□ 0.35
SMPD1-201ENST00000342245 ATF1P18846 271 aa17.25■□□□□ 0.35
SMPD1-201ENST00000342245 EIF2S3P41091 472 aaKnown RBP17.25■□□□□ 0.35
SMPD1-201ENST00000342245 TWF1Q12792 350 aa17.25■□□□□ 0.35
SMPD1-201ENST00000342245 OR2F1Q13607 317 aa17.25■□□□□ 0.35
SMPD1-201ENST00000342245 ARL9Q6T311 187 aa17.25■□□□□ 0.35
SMPD1-201ENST00000342245 KCNRGQ8N5I3 272 aa17.25■□□□□ 0.35
SMPD1-201ENST00000342245 OR4D11Q8NGI4 311 aa17.25■□□□□ 0.35
SMPD1-201ENST00000342245 OR5M1Q8NGP8 315 aa17.25■□□□□ 0.35
SMPD1-201ENST00000342245 TCTEX1D2Q8WW35 142 aa17.25■□□□□ 0.35
SMPD1-201ENST00000342245 WDR89Q96FK6 387 aaPredicted RBP17.25■□□□□ 0.35
SMPD1-201ENST00000342245 SGIP1Q9BQI5 828 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms