RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 PPP1R14CQ8TAE6 165 aa3.19□□□□□ -1.9
CCDC66-202ENST00000341455 AGR3Q8TD06 166 aa3.19□□□□□ -1.9
CCDC66-202ENST00000341455 BRIX1Q8TDN6 353 aaKnown RBP3.19□□□□□ -1.9
CCDC66-202ENST00000341455 NR4A3Q92570 626 aa3.19□□□□□ -1.9
CCDC66-202ENST00000341455 UCN3Q969E3 161 aa3.19□□□□□ -1.9
CCDC66-202ENST00000341455 SPACA9Q96E40 222 aaPredicted RBP3.19□□□□□ -1.9
CCDC66-202ENST00000341455 SENP5Q96HI0 755 aaPredicted RBP3.19□□□□□ -1.9
CCDC66-202ENST00000341455 AGAP4Q96P64 663 aa3.19□□□□□ -1.9
CCDC66-202ENST00000341455 DPY30Q9C005 99 aa3.19□□□□□ -1.9
CCDC66-202ENST00000341455 MCCC2Q9HCC0 563 aa3.19□□□□□ -1.9
CCDC66-202ENST00000341455 CALML5Q9NZT1 146 aa3.19□□□□□ -1.9
CCDC66-202ENST00000341455 MRPS18BQ9Y676 258 aaKnown RBP3.19□□□□□ -1.9
CCDC66-202ENST00000341455 BSNQ9UPA5 3926 aa3.19□□□□□ -1.9
CCDC66-202ENST00000341455 WDFY4Q6ZS81 3184 aa3.19□□□□□ -1.9
CCDC66-202ENST00000341455 H0Y3Z8 333 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 HMGN4O00479 90 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 NKX2-8O15522 239 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 PRKNO60260 465 aaPredicted RBP3.18□□□□□ -1.9
CCDC66-202ENST00000341455 EIF4E2O60573 245 aaKnown RBP3.18□□□□□ -1.9
CCDC66-202ENST00000341455 KRT75O95678 551 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 HEXAP06865 529 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 RAB6AP20340 208 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 CNR1P21554 472 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 PSMA4P25789 261 aaKnown RBP3.18□□□□□ -1.9
CCDC66-202ENST00000341455 EPHA3P29320 983 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 PRKAR1BP31321 381 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 SLC6A9P48067 706 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 TMED10P49755 219 aaKnown RBP3.18□□□□□ -1.9
CCDC66-202ENST00000341455 CDK9P50750 372 aaKnown RBP3.18□□□□□ -1.9
CCDC66-202ENST00000341455 PGDP52209 483 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 EEF1A1P68104 462 aaKnown RBP3.18□□□□□ -1.9
CCDC66-202ENST00000341455 HBA1P69905 142 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 MRPS35P82673 323 aaKnown RBP3.18□□□□□ -1.9
CCDC66-202ENST00000341455 ACTN3Q08043 901 aaPredicted RBP3.18□□□□□ -1.9
CCDC66-202ENST00000341455 GNA13Q14344 377 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 FGFBP1Q14512 234 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 PTGR1Q14914 329 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 GUSBP1Q15486 140 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 NSDHLQ15738 373 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 VPS26BQ4G0F5 336 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 FLYWCH1Q4VC44 716 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 MTX3Q5HYI7 312 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 ACER2Q5QJU3 275 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 LCE4AQ5TA78 99 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 ERICH5Q6P6B1 374 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 XKRXQ6PP77 449 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 SLC44A2Q8IWA5 706 aaPredicted RBP3.18□□□□□ -1.9
CCDC66-202ENST00000341455 DDIASQ8IXT1 998 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 ZNF440Q8IYI8 595 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 TAGAPQ8N103 731 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 SHISA5Q8N114 240 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 MMP21Q8N119 569 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 TRIML2Q8N7C3 387 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 CLEC1AQ8NC01 280 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 BBS10Q8TAM1 723 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 KLHL29Q96CT2 875 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 REXO5Q96IC2 774 aaKnown RBP3.18□□□□□ -1.9
CCDC66-202ENST00000341455 COX4I2Q96KJ9 171 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 EGLN2Q96KS0 407 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 TSSK3Q96PN8 268 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 RASL10BQ96S79 203 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 CCT8L2Q96SF2 557 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 ZBTB18Q99592 522 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 ARHGDIGQ99819 225 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 MACROD1Q9BQ69 325 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 G6PC3Q9BUM1 346 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 KAT8Q9H7Z6 458 aaKnown RBP3.18□□□□□ -1.9
CCDC66-202ENST00000341455 RNF122Q9H9V4 155 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 COPS7AQ9UBW8 275 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 MRTO4Q9UKD2 239 aaKnown RBP3.18□□□□□ -1.9
CCDC66-202ENST00000341455 ADAM21Q9UKJ8 722 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 C15orf41Q9Y2V0 281 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 MAU2Q9Y6X3 613 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 SCN2AQ99250 2005 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.18□□□□□ -1.9
CCDC66-202ENST00000341455 A0A0G2JPF8 293 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 OR14I1A6ND48 311 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 LRRC3CA6NJW4 275 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 HNRNPCL2B2RXH8 293 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 HNRNPCL3B7ZW38 293 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 E9PQ18 207 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 DNPH1O43598 174 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 PEX11AO75192 247 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 AGFG2O95081 481 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 ALPPP05187 535 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 EIF2S1P05198 315 aaKnown RBP3.18□□□□□ -1.9
CCDC66-202ENST00000341455 HOXD4P09016 255 aaPredicted RBP3.18□□□□□ -1.9
CCDC66-202ENST00000341455 HNRNPCL4P0DMR1 293 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 THRBP10828 461 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 NT5EP21589 574 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 HTR1EP28566 365 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 S100A3P33764 101 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 SSR4P51571 173 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 PPP5CP53041 499 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 ADORA2A-AS1P86434 159 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 STX5Q13190 355 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 SRSF6Q13247 344 aaKnown RBP3.18□□□□□ -1.9
CCDC66-202ENST00000341455 PDK3Q15120 406 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 TGIF1Q15583 401 aa3.18□□□□□ -1.9
CCDC66-202ENST00000341455 SPANXN4Q5MJ08 99 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms