RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 HNRNPCL3B7ZW38 293 aa11.96□□□□□ -0.49
TUBD1-202ENST00000340993 FAM47E-STBD1D6RA91 191 aa11.96□□□□□ -0.49
TUBD1-202ENST00000340993 CCL21O00585 134 aa11.96□□□□□ -0.49
TUBD1-202ENST00000340993 NME4O00746 187 aa11.96□□□□□ -0.49
TUBD1-202ENST00000340993 PRRG2O14669 202 aa11.96□□□□□ -0.49
TUBD1-202ENST00000340993 HNRNPCL1O60812 293 aaKnown RBP11.96□□□□□ -0.49
TUBD1-202ENST00000340993 IGHG3P01860 377 aa11.96□□□□□ -0.49
TUBD1-202ENST00000340993 DBIP07108 87 aaKnown RBP11.96□□□□□ -0.49
TUBD1-202ENST00000340993 HNRNPCL4P0DMR1 293 aa11.96□□□□□ -0.49
TUBD1-202ENST00000340993 ESRRAP11474 423 aaPredicted RBP11.96□□□□□ -0.49
TUBD1-202ENST00000340993 PTNP21246 168 aa11.96□□□□□ -0.49
TUBD1-202ENST00000340993 LCN1P31025 176 aa11.96□□□□□ -0.49
TUBD1-202ENST00000340993 MSX2P35548 267 aaPredicted RBP11.96□□□□□ -0.49
TUBD1-202ENST00000340993 PGM1P36871 562 aa11.96□□□□□ -0.49
TUBD1-202ENST00000340993 P2RX1P51575 399 aa11.96□□□□□ -0.49
TUBD1-202ENST00000340993 LIPEQ05469 1076 aa11.96□□□□□ -0.49
TUBD1-202ENST00000340993 GNA13Q14344 377 aa11.96□□□□□ -0.49
TUBD1-202ENST00000340993 QPRTQ15274 297 aa11.96□□□□□ -0.49
TUBD1-202ENST00000340993 GXYLT1Q4G148 440 aa11.96□□□□□ -0.49
TUBD1-202ENST00000340993 LIN52Q52LA3 116 aa11.96□□□□□ -0.49
TUBD1-202ENST00000340993 LRRC23Q53EV4 343 aaPredicted RBP11.96□□□□□ -0.49
TUBD1-202ENST00000340993 HIPK4Q8NE63 616 aa11.96□□□□□ -0.49
TUBD1-202ENST00000340993 OR8J3Q8NGG0 315 aa11.96□□□□□ -0.49
TUBD1-202ENST00000340993 PRR14Q9BWN1 585 aa11.96□□□□□ -0.49
TUBD1-202ENST00000340993 RSPO3Q9BXY4 272 aaPredicted RBP11.96□□□□□ -0.49
TUBD1-202ENST00000340993 OR2B2Q9GZK3 357 aa11.96□□□□□ -0.49
TUBD1-202ENST00000340993 ACKR4Q9NPB9 350 aa11.96□□□□□ -0.49
TUBD1-202ENST00000340993 THUMPD1Q9NXG2 353 aaKnown RBP11.96□□□□□ -0.49
TUBD1-202ENST00000340993 DNAJB12Q9NXW2 375 aaKnown RBP11.96□□□□□ -0.49
TUBD1-202ENST00000340993 ICAM5Q9UMF0 924 aa11.96□□□□□ -0.49
TUBD1-202ENST00000340993 ZNF337Q9Y3M9 751 aa11.96□□□□□ -0.49
TUBD1-202ENST00000340993 ARHGAP21Q5T5U3 1957 aa11.96□□□□□ -0.49
TUBD1-202ENST00000340993 TPST1O60507 370 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 PABPC4LP0CB38 370 aaKnown RBP11.95□□□□□ -0.5
TUBD1-202ENST00000340993 BMP2P12643 396 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 PRG2P13727 222 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 NID1P14543 1247 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 NCK1P16333 377 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 POU3F2P20265 443 aaPredicted RBP11.95□□□□□ -0.5
TUBD1-202ENST00000340993 RPS4Y1P22090 263 aaKnown RBP11.95□□□□□ -0.5
TUBD1-202ENST00000340993 PRDX6P30041 224 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 SFTPDP35247 375 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 GZMMP51124 257 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 B3GALT5-AS1P59052 145 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 TXNL4AP83876 142 aaKnown RBP11.95□□□□□ -0.5
TUBD1-202ENST00000340993 CRYZQ08257 329 aaKnown RBP11.95□□□□□ -0.5
TUBD1-202ENST00000340993 DMTNQ08495 405 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 CBFBQ13951 182 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 LARS2Q15031 903 aaKnown RBP11.95□□□□□ -0.5
TUBD1-202ENST00000340993 PLPPR5Q32ZL2 321 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 MTERF4Q7Z6M4 381 aaKnown RBP11.95□□□□□ -0.5
TUBD1-202ENST00000340993 SERPINA11Q86U17 422 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 DOLPP1Q86YN1 238 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 MISPQ8IVT2 679 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 SLC15A3Q8IY34 581 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 CADM2Q8N3J6 435 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 TOR1AIP2Q8NFQ8 470 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 OR2T12Q8NG77 320 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 OR5W2Q8NH69 310 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 FAM57AQ8TBR7 257 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 GPR119Q8TDV5 335 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 FIG4Q92562 907 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 ZNF583Q96ND8 569 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 TIMP4Q99727 224 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 SH3GL1Q99961 368 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 GPATCH1Q9BRR8 931 aaKnown RBP11.95□□□□□ -0.5
TUBD1-202ENST00000340993 TMEM38AQ9H6F2 299 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 CTPS2Q9NRF8 586 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 RYDENQ9NUL5 291 aaKnown RBP11.95□□□□□ -0.5
TUBD1-202ENST00000340993 CHST2Q9Y4C5 530 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 DSPPQ9NZW4 1301 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 AQP7O14520 342 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 SUSD5O60279 629 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 HCN1O60741 890 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 RNF224P0DH78 156 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 IDH2P48735 452 aaKnown RBP11.95□□□□□ -0.5
TUBD1-202ENST00000340993 CASP6P55212 293 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 VMACQ2NL98 169 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 EMC4Q5J8M3 183 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 WLSQ5T9L3 541 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 BNC2Q6ZN30 1099 aaPredicted RBP11.95□□□□□ -0.5
TUBD1-202ENST00000340993 KRT73Q86Y46 540 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 ARMC8Q8IUR7 673 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 VANGL1Q8TAA9 524 aaPredicted RBP11.95□□□□□ -0.5
TUBD1-202ENST00000340993 RNF217Q8TC41 542 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 POC1BQ8TC44 478 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 SLC26A7Q8TE54 656 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 SARAFQ96BY9 339 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 WFDC6Q9BQY6 131 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 LAT2Q9GZY6 243 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 PLSCR2Q9NRY7 297 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 QPCTLQ9NXS2 382 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 EGFL7Q9UHF1 273 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 ERRFI1Q9UJM3 462 aaPredicted RBP11.95□□□□□ -0.5
TUBD1-202ENST00000340993 SLC35A3Q9Y2D2 325 aa11.95□□□□□ -0.5
TUBD1-202ENST00000340993 MED12LQ86YW9 2145 aa11.94□□□□□ -0.5
TUBD1-202ENST00000340993 PHF3Q92576 2039 aaKnown RBP11.94□□□□□ -0.5
TUBD1-202ENST00000340993 IGLV3-32A0A0A0MS00 114 aa11.94□□□□□ -0.5
TUBD1-202ENST00000340993 B2RBV5 119 aa11.94□□□□□ -0.5
TUBD1-202ENST00000340993 H0Y3Z8 333 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms