RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 H3BNH8 94 aa13.87□□□□□ -0.19
VAPA-201ENST00000340541 PEX19P40855 299 aa13.87□□□□□ -0.19
VAPA-201ENST00000340541 CLDN20P56880 219 aa13.87□□□□□ -0.19
VAPA-201ENST00000340541 IRX1P78414 480 aaPredicted RBP13.87□□□□□ -0.19
VAPA-201ENST00000340541 TXNL4AP83876 142 aaKnown RBP13.87□□□□□ -0.19
VAPA-201ENST00000340541 PLAURQ03405 335 aa13.87□□□□□ -0.19
VAPA-201ENST00000340541 HSPB2Q16082 182 aa13.87□□□□□ -0.19
VAPA-201ENST00000340541 GGNQ86UU5 652 aa13.87□□□□□ -0.19
VAPA-201ENST00000340541 ZNF614Q8N883 585 aa13.87□□□□□ -0.19
VAPA-201ENST00000340541 ANKFN1Q8N957 763 aa13.87□□□□□ -0.19
VAPA-201ENST00000340541 RELL2Q8NC24 303 aaPredicted RBP13.87□□□□□ -0.19
VAPA-201ENST00000340541 ZBTB8AQ96BR9 441 aa13.87□□□□□ -0.19
VAPA-201ENST00000340541 AURKBQ96GD4 344 aaPredicted RBP13.87□□□□□ -0.19
VAPA-201ENST00000340541 TPT1P8Q9HAU6 139 aa13.87□□□□□ -0.19
VAPA-201ENST00000340541 MED4Q9NPJ6 270 aa13.87□□□□□ -0.19
VAPA-201ENST00000340541 TMEM45AQ9NWC5 275 aa13.87□□□□□ -0.19
VAPA-201ENST00000340541 CCDC167Q9P0B6 97 aa13.87□□□□□ -0.19
VAPA-201ENST00000340541 DCTN4Q9UJW0 460 aa13.87□□□□□ -0.19
VAPA-201ENST00000340541 L3MBTL1Q9Y468 752 aa13.87□□□□□ -0.19
VAPA-201ENST00000340541 WDR45Q9Y484 360 aa13.87□□□□□ -0.19
VAPA-201ENST00000340541 AP4B1Q9Y6B7 739 aa13.87□□□□□ -0.19
VAPA-201ENST00000340541 SETD2Q9BYW2 2564 aaPredicted RBP13.86□□□□□ -0.19
VAPA-201ENST00000340541 H3BML4 177 aa13.86□□□□□ -0.19
VAPA-201ENST00000340541 ZNF264O43296 627 aa13.86□□□□□ -0.19
VAPA-201ENST00000340541 EIF4E2O60573 245 aaKnown RBP13.86□□□□□ -0.19
VAPA-201ENST00000340541 DNAJA2O60884 412 aa13.86□□□□□ -0.19
VAPA-201ENST00000340541 BCAS1O75363 584 aaPredicted RBP13.86□□□□□ -0.19
VAPA-201ENST00000340541 H6PDO95479 791 aa13.86□□□□□ -0.19
VAPA-201ENST00000340541 KRT75O95678 551 aa13.86□□□□□ -0.19
VAPA-201ENST00000340541 TGM6O95932 706 aa13.86□□□□□ -0.19
VAPA-201ENST00000340541 CHRM4P08173 479 aa13.86□□□□□ -0.19
VAPA-201ENST00000340541 MAGEA8P43361 318 aa13.86□□□□□ -0.19
VAPA-201ENST00000340541 P2RX1P51575 399 aa13.86□□□□□ -0.19
VAPA-201ENST00000340541 ZNF41P51814 821 aaPredicted RBP13.86□□□□□ -0.19
VAPA-201ENST00000340541 SUMO3P55854 103 aaPredicted RBP13.86□□□□□ -0.19
VAPA-201ENST00000340541 CHRNEQ04844 493 aa13.86□□□□□ -0.19
VAPA-201ENST00000340541 SKP2Q13309 424 aa13.86□□□□□ -0.19
VAPA-201ENST00000340541 SQLEQ14534 574 aa13.86□□□□□ -0.19
VAPA-201ENST00000340541 TOMM34Q15785 309 aaPredicted RBP13.86□□□□□ -0.19
VAPA-201ENST00000340541 SYPL1Q16563 259 aa13.86□□□□□ -0.19
VAPA-201ENST00000340541 SLC25A35Q3KQZ1 300 aa13.86□□□□□ -0.19
VAPA-201ENST00000340541 C6orf10Q5SRN2 563 aa13.86□□□□□ -0.19
VAPA-201ENST00000340541 CGB2Q6NT52 195 aa13.86□□□□□ -0.19
VAPA-201ENST00000340541 MSRB3Q8IXL7 192 aa13.86□□□□□ -0.19
VAPA-201ENST00000340541 UBQLNLQ8IYU4 475 aa13.86□□□□□ -0.19
VAPA-201ENST00000340541 ZNF619Q8N2I2 560 aa13.86□□□□□ -0.19
VAPA-201ENST00000340541 ARFGAP2Q8N6H7 521 aa13.86□□□□□ -0.19
VAPA-201ENST00000340541 FAM71CQ8NEG0 241 aa13.86□□□□□ -0.19
VAPA-201ENST00000340541 GPR119Q8TDV5 335 aa13.86□□□□□ -0.19
VAPA-201ENST00000340541 OIT3Q8WWZ8 545 aa13.86□□□□□ -0.19
VAPA-201ENST00000340541 WNT2BQ93097 391 aa13.86□□□□□ -0.19
VAPA-201ENST00000340541 SPDL1Q96EA4 605 aa13.86□□□□□ -0.19
VAPA-201ENST00000340541 ARSGQ96EG1 525 aa13.86□□□□□ -0.19
VAPA-201ENST00000340541 RNF145Q96MT1 663 aa13.86□□□□□ -0.19
VAPA-201ENST00000340541 TRNT1Q96Q11 434 aaKnown RBP13.86□□□□□ -0.19
VAPA-201ENST00000340541 SIKE1Q9BRV8 207 aa13.86□□□□□ -0.19
VAPA-201ENST00000340541 QRSL1Q9H0R6 528 aaKnown RBP13.86□□□□□ -0.19
VAPA-201ENST00000340541 SLC38A1Q9H2H9 487 aa13.86□□□□□ -0.19
VAPA-201ENST00000340541 SLC25A37Q9NYZ2 338 aa13.86□□□□□ -0.19
VAPA-201ENST00000340541 LIPT1Q9Y234 373 aa13.86□□□□□ -0.19
VAPA-201ENST00000340541 PCDHB14Q9Y5E9 798 aa13.86□□□□□ -0.19
VAPA-201ENST00000340541 A0A096LPI6 279 aa13.85□□□□□ -0.19
VAPA-201ENST00000340541 GTPBP1O00178 669 aaKnown RBP13.85□□□□□ -0.19
VAPA-201ENST00000340541 ETV2O00321 342 aaPredicted RBP13.85□□□□□ -0.19
VAPA-201ENST00000340541 NR5A2O00482 541 aa13.85□□□□□ -0.19
VAPA-201ENST00000340541 EFNA2O43921 213 aa13.85□□□□□ -0.19
VAPA-201ENST00000340541 ANP32DO95626 131 aa13.85□□□□□ -0.19
VAPA-201ENST00000340541 NTN1O95631 604 aa13.85□□□□□ -0.19
VAPA-201ENST00000340541 IL2RAP01589 272 aa13.85□□□□□ -0.19
VAPA-201ENST00000340541 UBL4AP11441 157 aa13.85□□□□□ -0.19
VAPA-201ENST00000340541 ETFAP13804 333 aa13.85□□□□□ -0.19
VAPA-201ENST00000340541 IL11P20809 199 aa13.85□□□□□ -0.19
VAPA-201ENST00000340541 PGM1P36871 562 aa13.85□□□□□ -0.19
VAPA-201ENST00000340541 ANXA11P50995 505 aaKnown RBP13.85□□□□□ -0.19
VAPA-201ENST00000340541 GUCY1A3Q02108 690 aa13.85□□□□□ -0.19
VAPA-201ENST00000340541 FOXF1Q12946 379 aa13.85□□□□□ -0.19
VAPA-201ENST00000340541 FOXF2Q12947 444 aa13.85□□□□□ -0.19
VAPA-201ENST00000340541 FGFBP1Q14512 234 aa13.85□□□□□ -0.19
VAPA-201ENST00000340541 CTU2Q2VPK5 515 aaKnown RBP13.85□□□□□ -0.19
VAPA-201ENST00000340541 GPAT3Q53EU6 434 aa13.85□□□□□ -0.19
VAPA-201ENST00000340541 AGKQ53H12 422 aa13.85□□□□□ -0.19
VAPA-201ENST00000340541 PAGE3Q5JUK9 113 aa13.85□□□□□ -0.19
VAPA-201ENST00000340541 LRIF1Q5T3J3 769 aa13.85□□□□□ -0.19
VAPA-201ENST00000340541 HMGN2P46Q86SG4 172 aa13.85□□□□□ -0.19
VAPA-201ENST00000340541 MEIOBQ8N635 442 aa13.85□□□□□ -0.19
VAPA-201ENST00000340541 METTL25Q8N6Q8 603 aa13.85□□□□□ -0.19
VAPA-201ENST00000340541 OR5W2Q8NH69 310 aa13.85□□□□□ -0.19
VAPA-201ENST00000340541 ADGRG7Q96K78 797 aa13.85□□□□□ -0.19
VAPA-201ENST00000340541 LAT2Q9GZY6 243 aa13.85□□□□□ -0.19
VAPA-201ENST00000340541 CCDC134Q9H6E4 229 aa13.85□□□□□ -0.19
VAPA-201ENST00000340541 FGFR1OP2Q9NVK5 253 aa13.85□□□□□ -0.19
VAPA-201ENST00000340541 SLAMF8Q9P0V8 285 aa13.85□□□□□ -0.19
VAPA-201ENST00000340541 ZNF629Q9UEG4 869 aaPredicted RBP13.85□□□□□ -0.19
VAPA-201ENST00000340541 SPG11Q96JI7 2443 aa13.85□□□□□ -0.19
VAPA-201ENST00000340541 TRBV5-3A0A0A0MS03 114 aa13.84□□□□□ -0.19
VAPA-201ENST00000340541 A0A0G2JND7 137 aa13.84□□□□□ -0.19
VAPA-201ENST00000340541 FAM221AA4D161 298 aa13.84□□□□□ -0.19
VAPA-201ENST00000340541 AGAP5A6NIR3 686 aa13.84□□□□□ -0.19
VAPA-201ENST00000340541 SEC14L5O43304 696 aa13.84□□□□□ -0.19
VAPA-201ENST00000340541 ATP8B1O43520 1251 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms