RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 RFLNBQ8N5W9 214 aa13.38□□□□□ -0.27
CPSF7-201ENST00000340437 ZNF655Q8N720 491 aaPredicted RBP13.38□□□□□ -0.27
CPSF7-201ENST00000340437 OR4K13Q8NH42 304 aa13.38□□□□□ -0.27
CPSF7-201ENST00000340437 KIAA1143Q96AT1 154 aaPredicted RBP13.38□□□□□ -0.27
CPSF7-201ENST00000340437 TRIM43Q96BQ3 446 aaPredicted RBP13.38□□□□□ -0.27
CPSF7-201ENST00000340437 GDF15Q99988 308 aa13.38□□□□□ -0.27
CPSF7-201ENST00000340437 MARVELD1Q9BSK0 173 aa13.38□□□□□ -0.27
CPSF7-201ENST00000340437 PHPT1Q9NRX4 125 aaPredicted RBP13.38□□□□□ -0.27
CPSF7-201ENST00000340437 STARD5Q9NSY2 213 aa13.38□□□□□ -0.27
CPSF7-201ENST00000340437 IL20Q9NYY1 176 aa13.38□□□□□ -0.27
CPSF7-201ENST00000340437 SPATA2Q9UM82 520 aa13.38□□□□□ -0.27
CPSF7-201ENST00000340437 FAM86C2PA6NEL3 165 aa13.38□□□□□ -0.27
CPSF7-201ENST00000340437 ANKRD61A6NGH8 418 aa13.38□□□□□ -0.27
CPSF7-201ENST00000340437 I3L521 148 aa13.38□□□□□ -0.27
CPSF7-201ENST00000340437 SLC43A1O75387 559 aa13.38□□□□□ -0.27
CPSF7-201ENST00000340437 ZGLP1P0C6A0 271 aa13.38□□□□□ -0.27
CPSF7-201ENST00000340437 FPR3P25089 353 aa13.38□□□□□ -0.27
CPSF7-201ENST00000340437 HSD17B2P37059 387 aa13.38□□□□□ -0.27
CPSF7-201ENST00000340437 CLDN12P56749 244 aa13.38□□□□□ -0.27
CPSF7-201ENST00000340437 VSX2P58304 361 aaPredicted RBP13.38□□□□□ -0.27
CPSF7-201ENST00000340437 SRSF5Q13243 272 aaKnown RBP13.38□□□□□ -0.27
CPSF7-201ENST00000340437 CRMP1Q14194 572 aa13.38□□□□□ -0.27
CPSF7-201ENST00000340437 SUZ12Q15022 739 aaKnown RBP13.38□□□□□ -0.27
CPSF7-201ENST00000340437 MRPL2Q5T653 305 aaKnown RBP13.38□□□□□ -0.27
CPSF7-201ENST00000340437 WDR88Q6ZMY6 472 aa13.38□□□□□ -0.27
CPSF7-201ENST00000340437 PRR23CQ6ZRP0 262 aa13.38□□□□□ -0.27
CPSF7-201ENST00000340437 MEPCEQ7L2J0 689 aaKnown RBP13.38□□□□□ -0.27
CPSF7-201ENST00000340437 KIAA0907Q7Z7F0 614 aaPredicted RBP13.38□□□□□ -0.27
CPSF7-201ENST00000340437 PLCZ1Q86YW0 608 aa13.38□□□□□ -0.27
CPSF7-201ENST00000340437 COX18Q8N8Q8 333 aa13.38□□□□□ -0.27
CPSF7-201ENST00000340437 OR5J2Q8NH18 312 aa13.38□□□□□ -0.27
CPSF7-201ENST00000340437 ABHD4Q8TB40 342 aa13.38□□□□□ -0.27
CPSF7-201ENST00000340437 MENTQ9BUN1 341 aa13.38□□□□□ -0.27
CPSF7-201ENST00000340437 TMEM74BQ9NUR3 256 aa13.38□□□□□ -0.27
CPSF7-201ENST00000340437 CIB4A0PJX0 185 aa13.38□□□□□ -0.27
CPSF7-201ENST00000340437 CDHR4A6H8M9 788 aa13.38□□□□□ -0.27
CPSF7-201ENST00000340437 GMFGO60234 142 aa13.38□□□□□ -0.27
CPSF7-201ENST00000340437 PTHLHP12272 177 aa13.38□□□□□ -0.27
CPSF7-201ENST00000340437 STOMP27105 288 aa13.38□□□□□ -0.27
CPSF7-201ENST00000340437 DUSP6Q16828 381 aa13.38□□□□□ -0.27
CPSF7-201ENST00000340437 FAM78AQ5JUQ0 283 aa13.38□□□□□ -0.27
CPSF7-201ENST00000340437 RNLSQ5VYX0 342 aa13.38□□□□□ -0.27
CPSF7-201ENST00000340437 FRRS1Q6ZNA5 592 aa13.38□□□□□ -0.27
CPSF7-201ENST00000340437 SIAH3Q8IW03 269 aa13.38□□□□□ -0.27
CPSF7-201ENST00000340437 DUSP18Q8NEJ0 188 aa13.38□□□□□ -0.27
CPSF7-201ENST00000340437 OR4C6Q8NH72 309 aa13.38□□□□□ -0.27
CPSF7-201ENST00000340437 GHSRQ92847 366 aa13.38□□□□□ -0.27
CPSF7-201ENST00000340437 BADQ92934 168 aa13.38□□□□□ -0.27
CPSF7-201ENST00000340437 ARID1AO14497 2285 aa13.38□□□□□ -0.27
CPSF7-201ENST00000340437 LRRN3E7EW58 273 aa13.37□□□□□ -0.27
CPSF7-201ENST00000340437 OR1Q1Q15612 314 aa13.37□□□□□ -0.27
CPSF7-201ENST00000340437 HYAL4Q2M3T9 481 aa13.37□□□□□ -0.27
CPSF7-201ENST00000340437 NRROSQ86YC3 692 aa13.37□□□□□ -0.27
CPSF7-201ENST00000340437 PIAS4Q8N2W9 510 aaPredicted RBP13.37□□□□□ -0.27
CPSF7-201ENST00000340437 SLC44A3Q8N4M1 653 aa13.37□□□□□ -0.27
CPSF7-201ENST00000340437 FGF11Q92914 225 aa13.37□□□□□ -0.27
CPSF7-201ENST00000340437 CHFRQ96EP1 664 aa13.37□□□□□ -0.27
CPSF7-201ENST00000340437 MAP6Q96JE9 813 aa13.37□□□□□ -0.27
CPSF7-201ENST00000340437 LRRN3Q9H3W5 708 aa13.37□□□□□ -0.27
CPSF7-201ENST00000340437 FLVCR2Q9UPI3 526 aa13.37□□□□□ -0.27
CPSF7-201ENST00000340437 PRKNO60260 465 aaPredicted RBP13.37□□□□□ -0.27
CPSF7-201ENST00000340437 MT-ND5P03915 603 aa13.37□□□□□ -0.27
CPSF7-201ENST00000340437 CMPK1P30085 196 aa13.37□□□□□ -0.27
CPSF7-201ENST00000340437 ODF4Q2M2E3 257 aa13.37□□□□□ -0.27
CPSF7-201ENST00000340437 SMUG1Q53HV7 270 aa13.37□□□□□ -0.27
CPSF7-201ENST00000340437 RANBP3LQ86VV4 465 aaPredicted RBP13.37□□□□□ -0.27
CPSF7-201ENST00000340437 IL17RCQ8NAC3 791 aa13.37□□□□□ -0.27
CPSF7-201ENST00000340437 SDR9C7Q8NEX9 313 aa13.37□□□□□ -0.27
CPSF7-201ENST00000340437 OR5M3Q8NGP4 307 aa13.37□□□□□ -0.27
CPSF7-201ENST00000340437 TMEM239Q8WW34 195 aa13.37□□□□□ -0.27
CPSF7-201ENST00000340437 OTUB2Q96DC9 234 aa13.37□□□□□ -0.27
CPSF7-201ENST00000340437 MS4A3Q96HJ5 214 aa13.37□□□□□ -0.27
CPSF7-201ENST00000340437 HS6ST2Q96MM7 605 aa13.37□□□□□ -0.27
CPSF7-201ENST00000340437 SLC25A18Q9H1K4 315 aa13.37□□□□□ -0.27
CPSF7-201ENST00000340437 CALML5Q9NZT1 146 aa13.37□□□□□ -0.27
CPSF7-201ENST00000340437 ADAM29Q9UKF5 820 aa13.37□□□□□ -0.27
CPSF7-201ENST00000340437 TMEM5Q9Y2B1 443 aa13.37□□□□□ -0.27
CPSF7-201ENST00000340437 A0A1B0GVT2 93 aa13.37□□□□□ -0.27
CPSF7-201ENST00000340437 PVRP15151 417 aa13.37□□□□□ -0.27
CPSF7-201ENST00000340437 DECR1Q16698 335 aa13.37□□□□□ -0.27
CPSF7-201ENST00000340437 TMEM35AQ53FP2 167 aa13.37□□□□□ -0.27
CPSF7-201ENST00000340437 SLC25A30Q5SVS4 291 aa13.37□□□□□ -0.27
CPSF7-201ENST00000340437 HES5Q5TA89 166 aa13.37□□□□□ -0.27
CPSF7-201ENST00000340437 HBMQ6B0K9 141 aa13.37□□□□□ -0.27
CPSF7-201ENST00000340437 ZNF765Q7L2R6 523 aa13.37□□□□□ -0.27
CPSF7-201ENST00000340437 LINGO2Q7L985 606 aa13.37□□□□□ -0.27
CPSF7-201ENST00000340437 LRRC25Q8N386 305 aaPredicted RBP13.37□□□□□ -0.27
CPSF7-201ENST00000340437 FAM109AQ8N4B1 249 aa13.37□□□□□ -0.27
CPSF7-201ENST00000340437 CCL4L1Q8NHW4 92 aa13.37□□□□□ -0.27
CPSF7-201ENST00000340437 SMPDL3BQ92485 455 aa13.37□□□□□ -0.27
CPSF7-201ENST00000340437 TNFRSF13CQ96RJ3 184 aa13.37□□□□□ -0.27
CPSF7-201ENST00000340437 TEAD3Q99594 435 aa13.37□□□□□ -0.27
CPSF7-201ENST00000340437 ARHGDIGQ99819 225 aa13.37□□□□□ -0.27
CPSF7-201ENST00000340437 DPAGT1Q9H3H5 408 aa13.37□□□□□ -0.27
CPSF7-201ENST00000340437 ACSL5Q9ULC5 683 aa13.37□□□□□ -0.27
CPSF7-201ENST00000340437 PPIEQ9UNP9 301 aaKnown RBP13.37□□□□□ -0.27
CPSF7-201ENST00000340437 OBSL1O75147 1896 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 MDC1Q14676 2089 aaKnown RBP13.36□□□□□ -0.27
CPSF7-201ENST00000340437 RIIAD1A6NNX1 92 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 TEX46H3BTG2 121 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms