RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 HMG20AQ9NP66 347 aa9.4□□□□□ -0.9
RBFOX1-202ENST00000340209 KRCC1Q9NPI7 259 aaPredicted RBP9.4□□□□□ -0.9
RBFOX1-202ENST00000340209 CBLCQ9ULV8 474 aa9.4□□□□□ -0.9
RBFOX1-202ENST00000340209 ADAM18Q9Y3Q7 739 aa9.4□□□□□ -0.9
RBFOX1-202ENST00000340209 CACNA1GO43497 2377 aa9.4□□□□□ -0.9
RBFOX1-202ENST00000340209 CD8B2A6NJW9 211 aa9.4□□□□□ -0.9
RBFOX1-202ENST00000340209 CLDN25C9JDP6 229 aa9.4□□□□□ -0.9
RBFOX1-202ENST00000340209 H7C1C5 153 aa9.4□□□□□ -0.9
RBFOX1-202ENST00000340209 CCRL2O00421 344 aa9.4□□□□□ -0.9
RBFOX1-202ENST00000340209 CDRT1O95170 752 aa9.4□□□□□ -0.9
RBFOX1-202ENST00000340209 DLGAP3O95886 979 aa9.4□□□□□ -0.9
RBFOX1-202ENST00000340209 PLGP00747 810 aaPredicted RBP9.4□□□□□ -0.9
RBFOX1-202ENST00000340209 CLEC2LP0C7M8 214 aa9.4□□□□□ -0.9
RBFOX1-202ENST00000340209 CD8BP10966 210 aa9.4□□□□□ -0.9
RBFOX1-202ENST00000340209 GSTM3P21266 225 aa9.4□□□□□ -0.9
RBFOX1-202ENST00000340209 IL12BP29460 328 aa9.4□□□□□ -0.9
RBFOX1-202ENST00000340209 CSF2RBP32927 897 aa9.4□□□□□ -0.9
RBFOX1-202ENST00000340209 TGFBR2P37173 567 aa9.4□□□□□ -0.9
RBFOX1-202ENST00000340209 LCN6P62502 163 aa9.4□□□□□ -0.9
RBFOX1-202ENST00000340209 TSPAN31Q12999 210 aa9.4□□□□□ -0.9
RBFOX1-202ENST00000340209 TBCEQ15813 527 aaPredicted RBP9.4□□□□□ -0.9
RBFOX1-202ENST00000340209 NPSR1Q6W5P4 371 aa9.4□□□□□ -0.9
RBFOX1-202ENST00000340209 THSD4Q6ZMP0 1018 aa9.4□□□□□ -0.9
RBFOX1-202ENST00000340209 CXXC5Q7LFL8 322 aaKnown RBP9.4□□□□□ -0.9
RBFOX1-202ENST00000340209 OR52I1Q8NGK6 324 aa9.4□□□□□ -0.9
RBFOX1-202ENST00000340209 C8orf44Q96CB5 159 aa9.4□□□□□ -0.9
RBFOX1-202ENST00000340209 ERMAPQ96PL5 475 aaPredicted RBP9.4□□□□□ -0.9
RBFOX1-202ENST00000340209 ELF4Q99607 663 aaPredicted RBP9.4□□□□□ -0.9
RBFOX1-202ENST00000340209 C14orf119Q9NWQ9 140 aa9.4□□□□□ -0.9
RBFOX1-202ENST00000340209 SIDT1Q9NXL6 827 aaKnown RBP9.4□□□□□ -0.9
RBFOX1-202ENST00000340209 WDFY3Q8IZQ1 3526 aa9.4□□□□□ -0.9
RBFOX1-202ENST00000340209 IGHV1OR21-1A0A087WYE8 117 aa9.4□□□□□ -0.91
RBFOX1-202ENST00000340209 C11orf98E9PRG8 122 aa9.4□□□□□ -0.91
RBFOX1-202ENST00000340209 PSMA1P25786 263 aaKnown RBP9.4□□□□□ -0.91
RBFOX1-202ENST00000340209 FZD5Q13467 585 aa9.4□□□□□ -0.91
RBFOX1-202ENST00000340209 TAB1Q15750 504 aa9.4□□□□□ -0.91
RBFOX1-202ENST00000340209 ZMYND19Q96E35 227 aaPredicted RBP9.4□□□□□ -0.91
RBFOX1-202ENST00000340209 YIPF6Q96EC8 236 aa9.4□□□□□ -0.91
RBFOX1-202ENST00000340209 ZNF350Q9GZX5 532 aa9.4□□□□□ -0.91
RBFOX1-202ENST00000340209 HINT3Q9NQE9 182 aaKnown RBP9.4□□□□□ -0.91
RBFOX1-202ENST00000340209 GTF2A1LQ9UNN4 478 aa9.4□□□□□ -0.91
RBFOX1-202ENST00000340209 FREM2Q5SZK8 3169 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 C2orf92A0A1B0GVN3 265 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 CTDSP2O14595 271 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 IMPA2O14732 288 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 PLOD3O60568 738 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 SRPX2O60687 465 aaPredicted RBP9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 PRAMEF2O60811 474 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 CTNSO60931 367 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 RAB36O95755 333 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 BMP4P12644 408 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 AHCYP23526 432 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 ODF4Q2M2E3 257 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 C1orf94Q6P1W5 598 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 KIRREL2Q6UWL6 708 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 PLXDC1Q8IUK5 500 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 OR6C4Q8NGE1 309 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 OR6C1Q96RD1 312 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 NELL2Q99435 816 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 ARHGDIGQ99819 225 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 HCAR1Q9BXC0 346 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 ASPNQ9BXN1 380 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 PRRG3Q9BZD7 231 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 CDHR4A6H8M9 788 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 FAM221BA6H8Z2 402 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 ASNA1O43681 348 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 RFPL3O75679 317 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 NCR1O76036 304 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 GABRB1P18505 474 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 ZNF136P52737 540 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 HSD11B2P80365 405 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 SLC3A1Q07837 685 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 DECR1Q16698 335 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 PGGHGQ32M88 737 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 ARL9Q6T311 187 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 CBLN3Q6UW01 205 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 OR52E2Q8NGJ4 325 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 OR4C6Q8NH72 309 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 UBQLN3Q9H347 655 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 GPN2Q9H9Y4 310 aaPredicted RBP9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 SERTAD3Q9UJW9 196 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 ZNF346Q9UL40 294 aaKnown RBP9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 ELOA3DA6NLF2 546 aaPredicted RBP9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 C4orf47A7E2U8 309 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 OMPP47874 163 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 FASLGP48023 281 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 CSNK2BP67870 215 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 RUNX1T1Q06455 604 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 MOGQ16653 247 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 ELOA3BQ3SY89 546 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 MBOAT2Q6ZWT7 520 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 SLC46A3Q7Z3Q1 461 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 BCORP1Q8N888 145 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 KBTBD8Q8NFY9 601 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 ELOA3Q8NG57 546 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 FCGR1BQ92637 280 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 OSTF1Q92882 214 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 MND1Q9BWT6 205 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 GAREM1Q9H706 876 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 DUSP22Q9NRW4 184 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms