RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 RFPL3O75679 317 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 YES1P07947 543 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 CCNYL3P0C7X3 344 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 SMIM10L1P0DMW3 83 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 HOXB3P14651 431 aaPredicted RBP10.01□□□□□ -0.81
RTN3-201ENST00000338850 BUD31P41223 144 aaPredicted RBP10.01□□□□□ -0.81
RTN3-201ENST00000338850 CLDN6P56747 220 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 RAB25P57735 213 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 RGS8P57771 180 aaPredicted RBP10.01□□□□□ -0.81
RTN3-201ENST00000338850 TAS2R43P59537 309 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 RPS25P62851 125 aaKnown RBP10.01□□□□□ -0.81
RTN3-201ENST00000338850 RGS1Q08116 209 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 ZNF155Q12901 538 aaPredicted RBP10.01□□□□□ -0.81
RTN3-201ENST00000338850 CDK10Q15131 360 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 RPE65Q16518 533 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 ZFP69Q49AA0 526 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 GPAT3Q53EU6 434 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 C22orf42Q6IC83 251 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 MFSD12Q6NUT3 480 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 PAQR6Q6TCH4 344 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 FRRS1Q6ZNA5 592 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 ADCK2Q7Z695 626 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 OR2L13Q8N349 312 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 CLIP4Q8N3C7 705 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 AMER3Q8N944 861 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 OR2T33Q8NG76 320 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 OR52E1Q8NGJ3 308 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 ZFPM2Q8WW38 1151 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 HOXB13Q92826 284 aaPredicted RBP10.01□□□□□ -0.81
RTN3-201ENST00000338850 KLK6Q92876 244 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 SLC22A18Q96BI1 424 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 KLHDC7BQ96G42 594 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 SMIM10Q96HG1 83 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 DIRAS2Q96HU8 199 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 FRMD6Q96NE9 622 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 STACQ99469 402 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 KCNJ15Q99712 375 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 LGR4Q9BXB1 951 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 NIPAL2Q9H841 368 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 RNF121Q9H920 327 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 RBFOX1Q9NWB1 397 aaKnown RBP10.01□□□□□ -0.81
RTN3-201ENST00000338850 C14orf119Q9NWQ9 140 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 ZFR2Q9UPR6 939 aaKnown RBP10.01□□□□□ -0.81
RTN3-201ENST00000338850 CHST2Q9Y4C5 530 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 ATG4BQ9Y4P1 393 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 COLEC10Q9Y6Z7 277 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 KNTC1P50748 2209 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 NUP210LQ5VU65 1888 aa10□□□□□ -0.81
RTN3-201ENST00000338850 URADA6NGE7 173 aa10□□□□□ -0.81
RTN3-201ENST00000338850 WASHC1A8K0Z3 465 aa10□□□□□ -0.81
RTN3-201ENST00000338850 FAM25AB3EWG3 89 aa10□□□□□ -0.81
RTN3-201ENST00000338850 FAM25CB3EWG5 89 aa10□□□□□ -0.81
RTN3-201ENST00000338850 FAM25GB3EWG6 89 aa10□□□□□ -0.81
RTN3-201ENST00000338850 B4DXG7 233 aa10□□□□□ -0.81
RTN3-201ENST00000338850 C4orf51C9J302 202 aa10□□□□□ -0.81
RTN3-201ENST00000338850 SDC3O75056 442 aa10□□□□□ -0.81
RTN3-201ENST00000338850 SLC43A1O75387 559 aa10□□□□□ -0.81
RTN3-201ENST00000338850 CD1AP06126 327 aa10□□□□□ -0.81
RTN3-201ENST00000338850 CEACAM5P06731 702 aa10□□□□□ -0.81
RTN3-201ENST00000338850 FAM157BP0CG42 384 aa10□□□□□ -0.81
RTN3-201ENST00000338850 THEGLP0DJG4 465 aa10□□□□□ -0.81
RTN3-201ENST00000338850 ACP5P13686 325 aa10□□□□□ -0.81
RTN3-201ENST00000338850 ZNF10P21506 573 aaPredicted RBP10□□□□□ -0.81
RTN3-201ENST00000338850 MYL9P24844 172 aa10□□□□□ -0.81
RTN3-201ENST00000338850 PEBP1P30086 187 aaKnown RBP10□□□□□ -0.81
RTN3-201ENST00000338850 MAP2K3P46734 347 aa10□□□□□ -0.81
RTN3-201ENST00000338850 EVX1P49640 407 aa10□□□□□ -0.81
RTN3-201ENST00000338850 CLDN20P56880 219 aa10□□□□□ -0.81
RTN3-201ENST00000338850 BTG1P62324 171 aa10□□□□□ -0.81
RTN3-201ENST00000338850 FABP5Q01469 135 aa10□□□□□ -0.81
RTN3-201ENST00000338850 QPRTQ15274 297 aa10□□□□□ -0.81
RTN3-201ENST00000338850 COL28A1Q2UY09 1125 aa10□□□□□ -0.81
RTN3-201ENST00000338850 CRTC2Q53ET0 693 aaPredicted RBP10□□□□□ -0.81
RTN3-201ENST00000338850 HSD17B12Q53GQ0 312 aa10□□□□□ -0.81
RTN3-201ENST00000338850 C6orf132Q5T0Z8 1188 aa10□□□□□ -0.81
RTN3-201ENST00000338850 PLEKHM3Q6ZWE6 761 aa10□□□□□ -0.81
RTN3-201ENST00000338850 USP53Q70EK8 1073 aa10□□□□□ -0.81
RTN3-201ENST00000338850 TRILQ7L0X0 811 aa10□□□□□ -0.81
RTN3-201ENST00000338850 RRM2BQ7LG56 351 aa10□□□□□ -0.81
RTN3-201ENST00000338850 C16orf62Q7Z3J2 963 aa10□□□□□ -0.81
RTN3-201ENST00000338850 RANBP3LQ86VV4 465 aaPredicted RBP10□□□□□ -0.81
RTN3-201ENST00000338850 TPRA1Q86W33 373 aa10□□□□□ -0.81
RTN3-201ENST00000338850 GPALPP1Q8IXQ4 340 aa10□□□□□ -0.81
RTN3-201ENST00000338850 CACTIN-AS1Q8N1I8 211 aa10□□□□□ -0.81
RTN3-201ENST00000338850 LRRC25Q8N386 305 aaPredicted RBP10□□□□□ -0.81
RTN3-201ENST00000338850 TEX19Q8NA77 164 aa10□□□□□ -0.81
RTN3-201ENST00000338850 OR13H1Q8NG92 308 aa10□□□□□ -0.81
RTN3-201ENST00000338850 OR4Q3Q8NH05 313 aa10□□□□□ -0.81
RTN3-201ENST00000338850 OR8K5Q8NH50 307 aa10□□□□□ -0.81
RTN3-201ENST00000338850 OR52P1PQ8NH57 321 aa10□□□□□ -0.81
RTN3-201ENST00000338850 GRPEL2Q8TAA5 225 aa10□□□□□ -0.81
RTN3-201ENST00000338850 TM4SF19Q96DZ7 209 aa10□□□□□ -0.81
RTN3-201ENST00000338850 RNF170Q96K19 258 aa10□□□□□ -0.81
RTN3-201ENST00000338850 SERINC2Q96SA4 455 aa10□□□□□ -0.81
RTN3-201ENST00000338850 GON7Q9BXV9 100 aa10□□□□□ -0.81
RTN3-201ENST00000338850 ZNF350Q9GZX5 532 aa10□□□□□ -0.81
RTN3-201ENST00000338850 LYRM4Q9HD34 91 aa10□□□□□ -0.81
RTN3-201ENST00000338850 DUSP22Q9NRW4 184 aa10□□□□□ -0.81
RTN3-201ENST00000338850 HAO2Q9NYQ3 351 aa10□□□□□ -0.81
RTN3-201ENST00000338850 ZNF223Q9UK11 482 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms