RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 FAM234BA2RU67 622 aa13.73□□□□□ -0.21
PRKN-201ENST00000338468 DVL2O14641 736 aa13.73□□□□□ -0.21
PRKN-201ENST00000338468 POLR3GO15318 223 aaPredicted RBP13.73□□□□□ -0.21
PRKN-201ENST00000338468 EFNA2O43921 213 aa13.73□□□□□ -0.21
PRKN-201ENST00000338468 DNAJA2O60884 412 aa13.73□□□□□ -0.21
PRKN-201ENST00000338468 BCAS1O75363 584 aaPredicted RBP13.73□□□□□ -0.21
PRKN-201ENST00000338468 IL18BPO95998 194 aa13.73□□□□□ -0.21
PRKN-201ENST00000338468 TMIGD3P0DMS9 266 aaPredicted RBP13.73□□□□□ -0.21
PRKN-201ENST00000338468 HOXB9P17482 250 aaPredicted RBP13.73□□□□□ -0.21
PRKN-201ENST00000338468 P2RX1P51575 399 aa13.73□□□□□ -0.21
PRKN-201ENST00000338468 SUMO3P55854 103 aaPredicted RBP13.73□□□□□ -0.21
PRKN-201ENST00000338468 PLAURQ03405 335 aa13.73□□□□□ -0.21
PRKN-201ENST00000338468 SKP2Q13309 424 aa13.73□□□□□ -0.21
PRKN-201ENST00000338468 SYPL1Q16563 259 aa13.73□□□□□ -0.21
PRKN-201ENST00000338468 CTU2Q2VPK5 515 aaKnown RBP13.73□□□□□ -0.21
PRKN-201ENST00000338468 FBXL19-AS1Q494R0 122 aa13.73□□□□□ -0.21
PRKN-201ENST00000338468 GRAMD2AQ8IUY3 354 aa13.73□□□□□ -0.21
PRKN-201ENST00000338468 METTL25Q8N6Q8 603 aa13.73□□□□□ -0.21
PRKN-201ENST00000338468 TRIML2Q8N7C3 387 aa13.73□□□□□ -0.21
PRKN-201ENST00000338468 ZNF614Q8N883 585 aa13.73□□□□□ -0.21
PRKN-201ENST00000338468 ANKFN1Q8N957 763 aa13.73□□□□□ -0.21
PRKN-201ENST00000338468 GPR119Q8TDV5 335 aa13.73□□□□□ -0.21
PRKN-201ENST00000338468 SMPDL3BQ92485 455 aa13.73□□□□□ -0.21
PRKN-201ENST00000338468 ARSGQ96EG1 525 aa13.73□□□□□ -0.21
PRKN-201ENST00000338468 TM9SF2Q99805 663 aa13.73□□□□□ -0.21
PRKN-201ENST00000338468 SLC52A3Q9NQ40 469 aa13.73□□□□□ -0.21
PRKN-201ENST00000338468 POLE3Q9NRF9 147 aa13.73□□□□□ -0.21
PRKN-201ENST00000338468 JKAMPQ9P055 326 aa13.73□□□□□ -0.21
PRKN-201ENST00000338468 L3MBTL1Q9Y468 752 aa13.73□□□□□ -0.21
PRKN-201ENST00000338468 WDR45Q9Y484 360 aa13.73□□□□□ -0.21
PRKN-201ENST00000338468 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.72□□□□□ -0.21
PRKN-201ENST00000338468 H3BNH8 94 aa13.72□□□□□ -0.21
PRKN-201ENST00000338468 SYT5O00445 386 aa13.72□□□□□ -0.21
PRKN-201ENST00000338468 ZNF264O43296 627 aa13.72□□□□□ -0.21
PRKN-201ENST00000338468 EDF1O60869 148 aaKnown RBP13.72□□□□□ -0.21
PRKN-201ENST00000338468 TNFSF13O75888 250 aa13.72□□□□□ -0.21
PRKN-201ENST00000338468 H6PDO95479 791 aa13.72□□□□□ -0.21
PRKN-201ENST00000338468 NTN1O95631 604 aa13.72□□□□□ -0.21
PRKN-201ENST00000338468 OPN1LWP04000 364 aa13.72□□□□□ -0.21
PRKN-201ENST00000338468 CHRM4P08173 479 aa13.72□□□□□ -0.21
PRKN-201ENST00000338468 ZCCHC18P0CG32 403 aa13.72□□□□□ -0.21
PRKN-201ENST00000338468 UBL4AP11441 157 aa13.72□□□□□ -0.21
PRKN-201ENST00000338468 SHC1P29353 583 aa13.72□□□□□ -0.21
PRKN-201ENST00000338468 OPRM1P35372 400 aa13.72□□□□□ -0.21
PRKN-201ENST00000338468 ASCL1P50553 236 aa13.72□□□□□ -0.21
PRKN-201ENST00000338468 ZNF41P51814 821 aaPredicted RBP13.72□□□□□ -0.21
PRKN-201ENST00000338468 KRTAP10-9P60411 292 aa13.72□□□□□ -0.21
PRKN-201ENST00000338468 CHRNEQ04844 493 aa13.72□□□□□ -0.21
PRKN-201ENST00000338468 FOXF1Q12946 379 aa13.72□□□□□ -0.21
PRKN-201ENST00000338468 ATAD3BQ5T9A4 648 aa13.72□□□□□ -0.21
PRKN-201ENST00000338468 HMGN2P46Q86SG4 172 aa13.72□□□□□ -0.21
PRKN-201ENST00000338468 GCNT2Q8N0V5 402 aa13.72□□□□□ -0.21
PRKN-201ENST00000338468 FAM71CQ8NEG0 241 aa13.72□□□□□ -0.21
PRKN-201ENST00000338468 RFWD2Q8NHY2 731 aa13.72□□□□□ -0.21
PRKN-201ENST00000338468 GTF2H4Q92759 462 aa13.72□□□□□ -0.21
PRKN-201ENST00000338468 INTS12Q96CB8 462 aaKnown RBP13.72□□□□□ -0.21
PRKN-201ENST00000338468 THOC1Q96FV9 657 aaKnown RBP13.72□□□□□ -0.21
PRKN-201ENST00000338468 AURKBQ96GD4 344 aaPredicted RBP13.72□□□□□ -0.21
PRKN-201ENST00000338468 POM121Q96HA1 1249 aa13.72□□□□□ -0.21
PRKN-201ENST00000338468 ITCHQ96J02 903 aa13.72□□□□□ -0.21
PRKN-201ENST00000338468 ZFP3Q96NJ6 502 aa13.72□□□□□ -0.21
PRKN-201ENST00000338468 PINK1Q9BXM7 581 aa13.72□□□□□ -0.21
PRKN-201ENST00000338468 PAIP1Q9H074 479 aaKnown RBP13.72□□□□□ -0.21
PRKN-201ENST00000338468 QRSL1Q9H0R6 528 aaKnown RBP13.72□□□□□ -0.21
PRKN-201ENST00000338468 SLC38A1Q9H2H9 487 aa13.72□□□□□ -0.21
PRKN-201ENST00000338468 HEATR5AQ86XA9 2040 aa13.72□□□□□ -0.21
PRKN-201ENST00000338468 SLC22A20A6NK97 555 aa13.71□□□□□ -0.21
PRKN-201ENST00000338468 GTPBP1O00178 669 aaKnown RBP13.71□□□□□ -0.21
PRKN-201ENST00000338468 ETV2O00321 342 aaPredicted RBP13.71□□□□□ -0.21
PRKN-201ENST00000338468 ADAMDEC1O15204 470 aa13.71□□□□□ -0.21
PRKN-201ENST00000338468 EIF4E2O60573 245 aaKnown RBP13.71□□□□□ -0.21
PRKN-201ENST00000338468 PRKCAP17252 672 aa13.71□□□□□ -0.21
PRKN-201ENST00000338468 PGM1P36871 562 aa13.71□□□□□ -0.21
PRKN-201ENST00000338468 EEFSECP57772 596 aaKnown RBP13.71□□□□□ -0.21
PRKN-201ENST00000338468 RAC1P63000 192 aa13.71□□□□□ -0.21
PRKN-201ENST00000338468 TLE4Q04727 773 aa13.71□□□□□ -0.21
PRKN-201ENST00000338468 SNTB1Q13884 538 aaKnown RBP13.71□□□□□ -0.21
PRKN-201ENST00000338468 FGFBP1Q14512 234 aa13.71□□□□□ -0.21
PRKN-201ENST00000338468 SLC2A7Q6PXP3 512 aa13.71□□□□□ -0.21
PRKN-201ENST00000338468 BLOC1S3Q6QNY0 202 aa13.71□□□□□ -0.21
PRKN-201ENST00000338468 ZNF619Q8N2I2 560 aa13.71□□□□□ -0.21
PRKN-201ENST00000338468 OR5W2Q8NH69 310 aa13.71□□□□□ -0.21
PRKN-201ENST00000338468 FBXO27Q8NI29 283 aa13.71□□□□□ -0.21
PRKN-201ENST00000338468 FNDC9Q8TBE3 224 aa13.71□□□□□ -0.21
PRKN-201ENST00000338468 STON2Q8WXE9 905 aa13.71□□□□□ -0.21
PRKN-201ENST00000338468 TRNT1Q96Q11 434 aaKnown RBP13.71□□□□□ -0.21
PRKN-201ENST00000338468 SFXN3Q9BWM7 321 aa13.71□□□□□ -0.21
PRKN-201ENST00000338468 LAT2Q9GZY6 243 aa13.71□□□□□ -0.21
PRKN-201ENST00000338468 TMEM185BQ9H7F4 350 aa13.71□□□□□ -0.21
PRKN-201ENST00000338468 RMND5AQ9H871 391 aa13.71□□□□□ -0.21
PRKN-201ENST00000338468 TPT1P8Q9HAU6 139 aa13.71□□□□□ -0.21
PRKN-201ENST00000338468 MCCC2Q9HCC0 563 aa13.71□□□□□ -0.21
PRKN-201ENST00000338468 ANKHD1Q8IWZ3 2542 aaKnown RBP13.7□□□□□ -0.22
PRKN-201ENST00000338468 A0A0J9YW62 118 aa13.7□□□□□ -0.22
PRKN-201ENST00000338468 A0A1W2PNV4 684 aa13.7□□□□□ -0.22
PRKN-201ENST00000338468 CLDN24A6NM45 220 aa13.7□□□□□ -0.22
PRKN-201ENST00000338468 EIF1AYO14602 144 aaKnown RBP13.7□□□□□ -0.22
PRKN-201ENST00000338468 AQP8O94778 261 aa13.7□□□□□ -0.22
PRKN-201ENST00000338468 KRT75O95678 551 aa13.7□□□□□ -0.22
PRKN-201ENST00000338468 ETFAP13804 333 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms