RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 PPP1R14AQ96A00 147 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 UBE2ZQ9H832 354 aaPredicted RBP5.87□□□□□ -1.47
PRKDC-202ENST00000338368 MOV10Q9HCE1 1003 aaKnown RBP5.87□□□□□ -1.47
PRKDC-202ENST00000338368 CUTCQ9NTM9 273 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 TESQ9UGI8 421 aaKnown RBP5.87□□□□□ -1.47
PRKDC-202ENST00000338368 SH2B3Q9UQQ2 575 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 TRBV5-3A0A0A0MS03 114 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 ARHGAP33O14559 1287 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 GALR3O60755 368 aaPredicted RBP5.87□□□□□ -1.47
PRKDC-202ENST00000338368 RAB3BP20337 219 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 SSTR4P31391 388 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 DUSP5Q16690 384 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 CTU2Q2VPK5 515 aaKnown RBP5.87□□□□□ -1.47
PRKDC-202ENST00000338368 MAMDC2Q7Z304 686 aaPredicted RBP5.87□□□□□ -1.47
PRKDC-202ENST00000338368 ASB12Q8WXK4 309 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 DOCK6Q96HP0 2047 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 OR6C70A6NIJ9 312 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 NOS1APO75052 506 aaPredicted RBP5.87□□□□□ -1.47
PRKDC-202ENST00000338368 RACK1P63244 317 aaKnown RBP5.87□□□□□ -1.47
PRKDC-202ENST00000338368 ARHGAP11BQ3KRB8 267 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 TP53I3Q53FA7 332 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 ARL14Q8N4G2 192 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 PJA1Q8NG27 643 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 TNFRSF13CQ96RJ3 184 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 PDCD10Q9BUL8 212 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 PRDM7Q9NQW5 492 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 SLC35A3Q9Y2D2 325 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 SNX11Q9Y5W9 270 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 A0A1W2PPC4 97 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 A0A1W2PQL4 384 aaPredicted RBP5.87□□□□□ -1.47
PRKDC-202ENST00000338368 CDC40O60508 579 aaKnown RBP eCLIP5.87□□□□□ -1.473e-10■■■■□ 19.8
PRKDC-202ENST00000338368 CPNE6O95741 557 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 IFNA6P05013 189 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 ERCC1P07992 297 aaPredicted RBP5.87□□□□□ -1.47
PRKDC-202ENST00000338368 EPHA2P29317 976 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 MLF2Q15773 248 aaPredicted RBP5.87□□□□□ -1.47
PRKDC-202ENST00000338368 SGCBQ16585 318 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 SYCE2Q6PIF2 218 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 PRICKLE2Q7Z3G6 844 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 SFTPA1Q8IWL2 248 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 SDR16C5Q8N3Y7 309 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 C17orf50Q8WW18 174 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 ACOT12Q8WYK0 555 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 MROQ9BYG7 248 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 ENAMQ9NRM1 1142 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 CARD8Q9Y2G2 431 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 PCDHGB6Q9Y5F9 930 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 INMT-MINDY4F8WBC2 141 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 BMP1P13497 986 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 SLC1A3P43003 542 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 NXNL2Q5VZ03 156 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 CRIPAKQ8N1N5 446 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 OR51Q1Q8NH59 317 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 BAHD1Q8TBE0 780 aaPredicted RBP5.86□□□□□ -1.47
PRKDC-202ENST00000338368 THRSPQ92748 146 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 DMRTB1Q96MA1 342 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 ORAI3Q9BRQ5 295 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 C19orf53Q9UNZ5 99 aaPredicted RBP5.86□□□□□ -1.47
PRKDC-202ENST00000338368 TRBV2A0A0J9YWF9 115 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 ZAR1LA6NP61 321 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 H0YC42 278 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 MAPK3P27361 379 aaPredicted RBP5.86□□□□□ -1.47
PRKDC-202ENST00000338368 TEAD1P28347 426 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 MAP2K3P46734 347 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 RUNX2Q13950 521 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 SLC35A4Q96G79 324 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 FGF21Q9NSA1 209 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 BABAM2Q9NXR7 383 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 TAF1LQ8IZX4 1826 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 CDC14CA4D256 554 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 CTDSP2O14595 271 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 PEPDP12955 493 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 FPR3P25089 353 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 TRAM1Q15629 374 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 DGLUCYQ7Z3D6 616 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 FAM26EQ8N5C1 309 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 OR4F15Q8NGB8 312 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 LMF2Q9BU23 707 aaKnown RBP5.86□□□□□ -1.47
PRKDC-202ENST00000338368 MED28Q9H204 178 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 FAM171A2A8MVW0 826 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 JMJD7P0C870 316 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 GABRG2P18507 467 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 VASPP50552 380 aaPredicted RBP5.86□□□□□ -1.47
PRKDC-202ENST00000338368 ERVK-25P63136 954 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 OR8K3Q8NH51 312 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 KIAA1143Q96AT1 154 aaPredicted RBP5.86□□□□□ -1.47
PRKDC-202ENST00000338368 S100A16Q96FQ6 103 aaKnown RBP5.86□□□□□ -1.47
PRKDC-202ENST00000338368 GABARAPL1Q9H0R8 117 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 FOLH1BQ9HBA9 442 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 COMMD9Q9P000 198 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 VDAC3Q9Y277 283 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 TRAV27A0A087WT01 109 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 BOLA2-SMG1P6H3BVE0 249 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 TP53I11O14683 189 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 SLC6A8P48029 635 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 ZP2Q05996 745 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 LEG1Q6P5S2 330 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 SRPK3Q9UPE1 567 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 AGAP5A6NIR3 686 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 YY2O15391 372 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms