RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 CEBPBP17676 345 aa12.89□□□□□ -0.35
RTN4-202ENST00000337526 KCNJ5P48544 419 aa12.89□□□□□ -0.35
RTN4-202ENST00000337526 TLE3Q04726 772 aa12.89□□□□□ -0.35
RTN4-202ENST00000337526 EFR3AQ14156 821 aa12.89□□□□□ -0.35
RTN4-202ENST00000337526 INAVAQ3KP66 663 aa12.89□□□□□ -0.35
RTN4-202ENST00000337526 ADPRMQ3LIE5 342 aa12.89□□□□□ -0.35
RTN4-202ENST00000337526 ATAD3CQ5T2N8 411 aa12.89□□□□□ -0.35
RTN4-202ENST00000337526 VRK3Q8IV63 474 aa12.89□□□□□ -0.35
RTN4-202ENST00000337526 ANKLE1Q8NAG6 615 aa12.89□□□□□ -0.35
RTN4-202ENST00000337526 ZSCAN4Q8NAM6 433 aaPredicted RBP12.89□□□□□ -0.35
RTN4-202ENST00000337526 PHB2Q99623 299 aa12.89□□□□□ -0.35
RTN4-202ENST00000337526 NIPSNAP1Q9BPW8 284 aa12.89□□□□□ -0.35
RTN4-202ENST00000337526 ZNF442Q9H7R0 627 aa12.89□□□□□ -0.35
RTN4-202ENST00000337526 RANGRFQ9HD47 186 aaPredicted RBP12.89□□□□□ -0.35
RTN4-202ENST00000337526 APMAPQ9HDC9 416 aa12.89□□□□□ -0.35
RTN4-202ENST00000337526 INPP5EQ9NRR6 644 aa12.89□□□□□ -0.35
RTN4-202ENST00000337526 ZNF226Q9NYT6 803 aa12.89□□□□□ -0.35
RTN4-202ENST00000337526 SCML1Q9UN30 329 aa12.89□□□□□ -0.35
RTN4-202ENST00000337526 SLC35A3Q9Y2D2 325 aa12.89□□□□□ -0.35
RTN4-202ENST00000337526 C17orf105B2RV13 164 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 ZNF736B4DX44 427 aaPredicted RBP12.88□□□□□ -0.35
RTN4-202ENST00000337526 UGT2B7P16662 529 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 PTPN6P29350 595 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 CRABP1P29762 137 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 CYCSP99999 105 aaKnown RBP12.88□□□□□ -0.35
RTN4-202ENST00000337526 GLO1Q04760 184 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 OR1Q1Q15612 314 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 B3GLCTQ6Y288 498 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 ZNF709Q8N972 641 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 OR5H2Q8NGV7 314 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 SYNPRQ8TBG9 265 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 SLC22A8Q8TCC7 542 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 BRIX1Q8TDN6 353 aaKnown RBP12.88□□□□□ -0.35
RTN4-202ENST00000337526 NUDT8Q8WV74 236 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 QRSL1Q9H0R6 528 aaKnown RBP12.88□□□□□ -0.35
RTN4-202ENST00000337526 TMEM168Q9H0V1 697 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 ABRACLQ9P1F3 81 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 WASF3Q9UPY6 502 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 CROCCQ5TZA2 2017 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 NUP205Q92621 2012 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 LAMA4Q16363 1823 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 TMEM225BP0DP42 221 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 ZNF43P17038 809 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 GABRA5P31644 462 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 PLK5Q496M5 336 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 ZNF704Q6ZNC4 412 aaPredicted RBP12.88□□□□□ -0.35
RTN4-202ENST00000337526 LINC01465Q8N7H1 131 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 NINJ1Q92982 152 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 NDUFAF4Q9P032 175 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 GPR75O95800 540 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 MPIG6BO95866 241 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 SCG5P05408 212 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 CSF1P09603 554 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 SLC2A5P22732 501 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 LIPAP38571 399 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 CASP3P42574 277 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 SLC1A3P43003 542 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 DLX5P56178 289 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 SLC26A5P58743 744 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 ISL1P61371 349 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 RIN1Q13671 783 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 ARL6IP1Q15041 203 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 IL20RBQ6UXL0 311 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 PXKQ7Z7A4 578 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 TPRA1Q86W33 373 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 ZNF784Q8NCA9 323 aaPredicted RBP12.88□□□□□ -0.35
RTN4-202ENST00000337526 CXorf36Q9H7Y0 433 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 STARD5Q9NSY2 213 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 ADAM29Q9UKF5 820 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 NAALAD2Q9Y3Q0 740 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 DIRAS3O95661 229 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 DCNP07585 359 aaKnown RBP12.88□□□□□ -0.35
RTN4-202ENST00000337526 RPS5P46782 204 aaKnown RBP12.88□□□□□ -0.35
RTN4-202ENST00000337526 USF2Q15853 346 aaPredicted RBP12.88□□□□□ -0.35
RTN4-202ENST00000337526 TBC1D25Q3MII6 688 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 COX20Q5RI15 118 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 ARL14Q8N4G2 192 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 OR52R1Q8NGF1 315 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 SLC7A13Q8TCU3 470 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 C16orf58Q96GQ5 468 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 INTS14Q96SY0 518 aa12.88□□□□□ -0.35
RTN4-202ENST00000337526 ZNF443Q9Y2A4 671 aaPredicted RBP12.88□□□□□ -0.35
RTN4-202ENST00000337526 GFRA2O00451 464 aa12.87□□□□□ -0.35
RTN4-202ENST00000337526 MT-ND4P03905 459 aa12.87□□□□□ -0.35
RTN4-202ENST00000337526 APEX1P27695 318 aaKnown RBP12.87□□□□□ -0.35
RTN4-202ENST00000337526 EVI2BP34910 448 aa12.87□□□□□ -0.35
RTN4-202ENST00000337526 PRR22Q8IZ63 422 aa12.87□□□□□ -0.35
RTN4-202ENST00000337526 MRPL43Q8N983 215 aaKnown RBP12.87□□□□□ -0.35
RTN4-202ENST00000337526 OR5K2Q8NHB8 316 aa12.87□□□□□ -0.35
RTN4-202ENST00000337526 TPSD1Q9BZJ3 242 aa12.87□□□□□ -0.35
RTN4-202ENST00000337526 FAM227AF5H4B4 570 aa12.87□□□□□ -0.35
RTN4-202ENST00000337526 SSX5O60225 188 aa12.87□□□□□ -0.35
RTN4-202ENST00000337526 AIFM1O95831 613 aa12.87□□□□□ -0.35
RTN4-202ENST00000337526 CPMP14384 443 aa12.87□□□□□ -0.35
RTN4-202ENST00000337526 PVRP15151 417 aa12.87□□□□□ -0.35
RTN4-202ENST00000337526 EIF2DP41214 584 aaKnown RBP12.87□□□□□ -0.35
RTN4-202ENST00000337526 SLC6A8P48029 635 aa12.87□□□□□ -0.35
RTN4-202ENST00000337526 PRAMEF8Q5VWM4 474 aa12.87□□□□□ -0.35
RTN4-202ENST00000337526 PRAMEF7Q5VXH5 474 aa12.87□□□□□ -0.35
RTN4-202ENST00000337526 KDM4DQ6B0I6 523 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms