RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 PLCXD1Q9NUJ7 323 aa15.09■□□□□ 0.01
NPHP3-201ENST00000337331 NDRG3Q9UGV2 375 aa15.09■□□□□ 0.01
NPHP3-201ENST00000337331 PRH1P02810 166 aa15.09■□□□□ 0.01
NPHP3-201ENST00000337331 RAP2BP61225 183 aa15.09■□□□□ 0.01
NPHP3-201ENST00000337331 CHAF1BQ13112 559 aa15.09■□□□□ 0.01
NPHP3-201ENST00000337331 RPS26P11Q5JNZ5 115 aaPredicted RBP15.09■□□□□ 0.01
NPHP3-201ENST00000337331 C8orf82Q6P1X6 216 aaPredicted RBP15.09■□□□□ 0.01
NPHP3-201ENST00000337331 DNM1P34Q6PK57 102 aa15.09■□□□□ 0.01
NPHP3-201ENST00000337331 CNTNAP3BQ96NU0 1288 aa15.09■□□□□ 0.01
NPHP3-201ENST00000337331 WDR77Q9BQA1 342 aaPredicted RBP15.09■□□□□ 0.01
NPHP3-201ENST00000337331 KATNB1Q9BVA0 655 aa15.09■□□□□ 0.01
NPHP3-201ENST00000337331 POLDIP3Q9BY77 421 aaKnown RBP15.09■□□□□ 0.01
NPHP3-201ENST00000337331 RPS10P5Q9NQ39 176 aa15.09■□□□□ 0.01
NPHP3-201ENST00000337331 THSD1Q9NS62 852 aa15.09■□□□□ 0.01
NPHP3-201ENST00000337331 SLC25A37Q9NYZ2 338 aa15.09■□□□□ 0.01
NPHP3-201ENST00000337331 CACNA1SQ13698 1873 aa15.08■□□□□ 0.01
NPHP3-201ENST00000337331 SOX1O00570 391 aaPredicted RBP15.08■□□□□ 0.01
NPHP3-201ENST00000337331 EIF1AYO14602 144 aaKnown RBP15.08■□□□□ 0.01
NPHP3-201ENST00000337331 KAT7O95251 611 aa15.08■□□□□ 0.01
NPHP3-201ENST00000337331 VNN2O95498 520 aa15.08■□□□□ 0.01
NPHP3-201ENST00000337331 MTHFD2P13995 350 aa15.08■□□□□ 0.01
NPHP3-201ENST00000337331 TAS2R38P59533 333 aa15.08■□□□□ 0.01
NPHP3-201ENST00000337331 SLC5A12Q1EHB4 618 aa15.08■□□□□ 0.01
NPHP3-201ENST00000337331 SERINC1Q9NRX5 453 aa15.08■□□□□ 0.01
NPHP3-201ENST00000337331 DZANK1Q9NVP4 752 aa15.08■□□□□ 0.01
NPHP3-201ENST00000337331 OR1A2Q9Y585 309 aa15.08■□□□□ 0.01
NPHP3-201ENST00000337331 PRSS21Q9Y6M0 314 aa15.08■□□□□ 0.01
NPHP3-201ENST00000337331 HOXD4P09016 255 aaPredicted RBP15.08■□□□□ 0
NPHP3-201ENST00000337331 RAB28P51157 221 aa15.08■□□□□ 0
NPHP3-201ENST00000337331 SNRPEP62304 92 aaKnown RBP15.08■□□□□ 0
NPHP3-201ENST00000337331 RPS21P63220 83 aaKnown RBP15.08■□□□□ 0
NPHP3-201ENST00000337331 PTPRRQ15256 657 aa15.08■□□□□ 0
NPHP3-201ENST00000337331 Q3ZCU0 254 aa15.08■□□□□ 0
NPHP3-201ENST00000337331 LRRC25Q8N386 305 aaPredicted RBP15.08■□□□□ 0
NPHP3-201ENST00000337331 METTL27Q8N6F8 245 aaPredicted RBP15.08■□□□□ 0
NPHP3-201ENST00000337331 OR5T3Q8NGG3 340 aa15.08■□□□□ 0
NPHP3-201ENST00000337331 CMSS1Q9BQ75 279 aaKnown RBP15.08■□□□□ 0
NPHP3-201ENST00000337331 MED18Q9BUE0 208 aa15.08■□□□□ 0
NPHP3-201ENST00000337331 FAM227AF5H4B4 570 aa15.08■□□□□ 0
NPHP3-201ENST00000337331 SULT1C2O00338 296 aa15.08■□□□□ 0
NPHP3-201ENST00000337331 SIGLEC5O15389 551 aa15.08■□□□□ 0
NPHP3-201ENST00000337331 HTR3BO95264 441 aa15.08■□□□□ 0
NPHP3-201ENST00000337331 B3GALT4O96024 378 aa15.08■□□□□ 0
NPHP3-201ENST00000337331 RBM34P42696 430 aaKnown RBP15.08■□□□□ 0
NPHP3-201ENST00000337331 SIGLEC14Q08ET2 396 aa15.08■□□□□ 0
NPHP3-201ENST00000337331 PLK5Q496M5 336 aa15.08■□□□□ 0
NPHP3-201ENST00000337331 RNF175Q8N4F7 328 aa15.08■□□□□ 0
NPHP3-201ENST00000337331 OR8S1Q8NH09 359 aa15.08■□□□□ 0
NPHP3-201ENST00000337331 TMEM163Q8TC26 289 aa15.08■□□□□ 0
NPHP3-201ENST00000337331 MMABQ96EY8 250 aaPredicted RBP15.08■□□□□ 0
NPHP3-201ENST00000337331 LDAHQ9H6V9 325 aa15.08■□□□□ 0
NPHP3-201ENST00000337331 RDH14Q9HBH5 336 aa15.08■□□□□ 0
NPHP3-201ENST00000337331 HHATLQ9HCP6 504 aa15.08■□□□□ 0
NPHP3-201ENST00000337331 GPR171O14626 319 aa15.08■□□□□ 0
NPHP3-201ENST00000337331 ADH1BP00325 375 aa15.08■□□□□ 0
NPHP3-201ENST00000337331 MAPK3P27361 379 aaPredicted RBP15.08■□□□□ 0
NPHP3-201ENST00000337331 CD79BP40259 229 aa15.08■□□□□ 0
NPHP3-201ENST00000337331 GAS6Q14393 721 aa15.08■□□□□ 0
NPHP3-201ENST00000337331 ALKAL1Q6UXT8 129 aa15.08■□□□□ 0
NPHP3-201ENST00000337331 ZNF550Q7Z398 422 aa15.08■□□□□ 0
NPHP3-201ENST00000337331 SERPINA11Q86U17 422 aa15.08■□□□□ 0
NPHP3-201ENST00000337331 ZNF227Q86WZ6 799 aa15.08■□□□□ 0
NPHP3-201ENST00000337331 LRRC28Q86X40 367 aaPredicted RBP15.08■□□□□ 0
NPHP3-201ENST00000337331 OR4M1Q8NGD0 313 aa15.08■□□□□ 0
NPHP3-201ENST00000337331 OR5AR1Q8NGP9 310 aa15.08■□□□□ 0
NPHP3-201ENST00000337331 FCAMRQ8WWV6 532 aa15.08■□□□□ 0
NPHP3-201ENST00000337331 RCE1Q9Y256 329 aa15.08■□□□□ 0
NPHP3-201ENST00000337331 CPED1A4D0V7 1026 aa15.07■□□□□ 0
NPHP3-201ENST00000337331 SIGLEC6O43699 453 aa15.07■□□□□ 0
NPHP3-201ENST00000337331 TACR1P25103 407 aa15.07■□□□□ 0
NPHP3-201ENST00000337331 OR4C11Q6IEV9 310 aa15.07■□□□□ 0
NPHP3-201ENST00000337331 H3F3CQ6NXT2 135 aa15.07■□□□□ 0
NPHP3-201ENST00000337331 UNC5DQ6UXZ4 953 aa15.07■□□□□ 0
NPHP3-201ENST00000337331 ABI3BPQ7Z7G0 1075 aa15.07■□□□□ 0
NPHP3-201ENST00000337331 DPPA2Q7Z7J5 298 aa15.07■□□□□ 0
NPHP3-201ENST00000337331 FOXRED2Q8IWF2 684 aa15.07■□□□□ 0
NPHP3-201ENST00000337331 NRMQ8IXM6 262 aa15.07■□□□□ 0
NPHP3-201ENST00000337331 TCEAL8Q8IYN2 117 aa15.07■□□□□ 0
NPHP3-201ENST00000337331 PMM1Q92871 262 aa15.07■□□□□ 0
NPHP3-201ENST00000337331 FAM46AQ96IP4 442 aaKnown RBP15.07■□□□□ 0
NPHP3-201ENST00000337331 SRA1Q9HD15 236 aaKnown RBP15.07■□□□□ 0
NPHP3-201ENST00000337331 SIRT5Q9NXA8 310 aa15.07■□□□□ 0
NPHP3-201ENST00000337331 UNC119BA6NIH7 251 aa15.07■□□□□ 0
NPHP3-201ENST00000337331 C11orf98E9PRG8 122 aa15.07■□□□□ 0
NPHP3-201ENST00000337331 UGDHO60701 494 aa15.07■□□□□ 0
NPHP3-201ENST00000337331 ZDHHC11BP0C7U3 371 aa15.07■□□□□ 0
NPHP3-201ENST00000337331 GP1BBP13224 206 aa15.07■□□□□ 0
NPHP3-201ENST00000337331 UGT2B7P16662 529 aa15.07■□□□□ 0
NPHP3-201ENST00000337331 AK4P27144 223 aaPredicted RBP15.07■□□□□ 0
NPHP3-201ENST00000337331 HOXD9P28356 352 aaPredicted RBP15.07■□□□□ 0
NPHP3-201ENST00000337331 C1orf61Q13536 156 aa15.07■□□□□ 0
NPHP3-201ENST00000337331 TMEM35AQ53FP2 167 aa15.07■□□□□ 0
NPHP3-201ENST00000337331 FAM122BQ7Z309 247 aa15.07■□□□□ 0
NPHP3-201ENST00000337331 SERPINA12Q8IW75 414 aa15.07■□□□□ 0
NPHP3-201ENST00000337331 CD300LFQ8TDQ1 290 aa15.07■□□□□ 0
NPHP3-201ENST00000337331 PAQR8Q8TEZ7 354 aa15.07■□□□□ 0
NPHP3-201ENST00000337331 ACOT11Q8WXI4 607 aaPredicted RBP15.07■□□□□ 0
NPHP3-201ENST00000337331 RAD9AQ99638 391 aa15.07■□□□□ 0
NPHP3-201ENST00000337331 MARVELD1Q9BSK0 173 aa15.07■□□□□ 0
NPHP3-201ENST00000337331 HCSTQ9UBK5 93 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms