RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 TYRP14679 529 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 GPX3P22352 226 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 DDOSTP39656 456 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 CXCR4P61073 352 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 TMPPEQ6ZT21 453 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 MAMDC2Q7Z304 686 aaPredicted RBP9.24□□□□□ -0.93
COL4A6-201ENST00000334504 IL17RCQ8NAC3 791 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 THAP3Q8WTV1 239 aaPredicted RBP9.24□□□□□ -0.93
COL4A6-201ENST00000334504 RNF170Q96K19 258 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 RPH3ALQ9UNE2 315 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 GM2AP17900 193 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 SELENOVP59797 346 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 PDZK1IP1Q13113 114 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 RBMS2Q15434 407 aaKnown RBP9.24□□□□□ -0.93
COL4A6-201ENST00000334504 FCRLAQ7L513 359 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 ZNF551Q7Z340 670 aaPredicted RBP9.24□□□□□ -0.93
COL4A6-201ENST00000334504 FJX1Q86VR8 437 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 ZNF440Q8IYI8 595 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 OR6V1Q8N148 313 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 SCARB1Q8WTV0 552 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 SORT1Q99523 831 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 C12orf57Q99622 126 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 SMOQ99835 787 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 NICN1Q9BSH3 213 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 C19orf25Q9UFG5 118 aaPredicted RBP9.24□□□□□ -0.93
COL4A6-201ENST00000334504 URGCP-MRPS24S4R325 110 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 SLC43A1O75387 559 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 SCAF4O95104 1147 aaKnown RBP9.24□□□□□ -0.93
COL4A6-201ENST00000334504 NDUFB2O95178 105 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 ETV3P41162 512 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 FKBP1BP68106 108 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 TXNDC15Q96J42 360 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 TEPSINQ96N21 525 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 PTCHD1Q96NR3 888 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 ERVMER34-1Q9H9K5 563 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 IER3IP1Q9Y5U9 82 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 TMEM235A6NFC5 223 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 EOMESO95936 686 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 PNMTP11086 282 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 KCNE1P15382 129 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 S100A11P31949 105 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 GHRHRQ02643 423 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 SCAPQ12770 1279 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 GRM2Q14416 872 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 ARHGAP19Q14CB8 494 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 SOHLH1Q5JUK2 328 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 ZNF704Q6ZNC4 412 aaPredicted RBP9.24□□□□□ -0.93
COL4A6-201ENST00000334504 TMUB2Q71RG4 321 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 TMEM135Q86UB9 458 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 OR8J2Q8NGG1 315 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 MTHFD2LQ9H903 347 aaPredicted RBP9.24□□□□□ -0.93
COL4A6-201ENST00000334504 HIF1ANQ9NWT6 349 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 OSGIN2Q9Y236 505 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 C7orf72A4D263 438 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 SOWAHBA6NEL2 793 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 NFKBIEO00221 500 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 MBP02144 154 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 CNR1P21554 472 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 FOXA1P55317 472 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 DEFB134Q4QY38 66 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 CATSPEREQ5SY80 951 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 CPZQ66K79 652 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 LYSMD2Q8IV50 215 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 KDM1BQ8NB78 822 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 ZBTB44Q8NCP5 570 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 TMEM163Q8TC26 289 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 C22orf15Q8WYQ4 148 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 CWH43Q9H720 699 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 ZNF286AQ9HBT8 521 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 EHFQ9NZC4 300 aa9.24□□□□□ -0.93
COL4A6-201ENST00000334504 GPR137BO60478 399 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 ACTL6BO94805 426 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 AK1P00568 194 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 OR13C7P0DN81 318 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 WDR5P61964 334 aaKnown RBP9.23□□□□□ -0.93
COL4A6-201ENST00000334504 RPS18P62269 152 aaKnown RBP9.23□□□□□ -0.93
COL4A6-201ENST00000334504 RPS25P62851 125 aaKnown RBP9.23□□□□□ -0.93
COL4A6-201ENST00000334504 TLE4Q04727 773 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 BRICD5Q6PL45 260 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 FAM185AQ8N0U4 392 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 YIPF5Q969M3 257 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 SLC2A13Q96QE2 648 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 NAA11Q9BSU3 229 aaPredicted RBP9.23□□□□□ -0.93
COL4A6-201ENST00000334504 GPR88Q9GZN0 384 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 SDR39U1Q9NRG7 319 aaPredicted RBP9.23□□□□□ -0.93
COL4A6-201ENST00000334504 RBFOX1Q9NWB1 397 aaKnown RBP9.23□□□□□ -0.93
COL4A6-201ENST00000334504 AFDNP55196 1824 aaKnown RBP9.23□□□□□ -0.93
COL4A6-201ENST00000334504 HIDE1A8MVS5 230 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 SOCS6O14544 535 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 MSTNO14793 375 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 SBK2P0C263 348 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 SNRPBP14678 240 aaKnown RBP9.23□□□□□ -0.93
COL4A6-201ENST00000334504 OMGP23515 440 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 GDNFP39905 211 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 GIPRP48546 466 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 GRM7Q14831 915 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 SIX1Q15475 284 aaPredicted RBP9.23□□□□□ -0.93
COL4A6-201ENST00000334504 ETFRF1Q6IPR1 90 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 ADGRF3Q8IZF5 1079 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 CMTM8Q8IZV2 173 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms