RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 NR4A1P22736 598 aa13.75□□□□□ -0.21
TPM3-205ENST00000328159 DUSP3P51452 185 aaPredicted RBP13.75□□□□□ -0.21
TPM3-205ENST00000328159 DCAF7P61962 342 aa13.75□□□□□ -0.21
TPM3-205ENST00000328159 CTF1Q16619 201 aa13.75□□□□□ -0.21
TPM3-205ENST00000328159 CLPPQ16740 277 aaPredicted RBP13.75□□□□□ -0.21
TPM3-205ENST00000328159 NDUFAF6Q330K2 333 aa13.75□□□□□ -0.21
TPM3-205ENST00000328159 KLHL26Q53HC5 615 aa13.75□□□□□ -0.21
TPM3-205ENST00000328159 PWWP2BQ6NUJ5 590 aa13.75□□□□□ -0.21
TPM3-205ENST00000328159 P2RY8Q86VZ1 359 aa13.75□□□□□ -0.21
TPM3-205ENST00000328159 LSRQ86X29 649 aaPredicted RBP13.75□□□□□ -0.21
TPM3-205ENST00000328159 SLITRK4Q8IW52 837 aa13.75□□□□□ -0.21
TPM3-205ENST00000328159 CDK20Q8IZL9 346 aa13.75□□□□□ -0.21
TPM3-205ENST00000328159 SLC38A9Q8NBW4 561 aa13.75□□□□□ -0.21
TPM3-205ENST00000328159 LRR1Q96L50 414 aa13.75□□□□□ -0.21
TPM3-205ENST00000328159 ZNF582Q96NG8 517 aaPredicted RBP13.75□□□□□ -0.21
TPM3-205ENST00000328159 GAL3ST4Q96RP7 486 aa13.75□□□□□ -0.21
TPM3-205ENST00000328159 GFM1Q96RP9 751 aaKnown RBP13.75□□□□□ -0.21
TPM3-205ENST00000328159 TEX12Q9BXU0 123 aa13.75□□□□□ -0.21
TPM3-205ENST00000328159 ATP13A2Q9NQ11 1180 aa13.75□□□□□ -0.21
TPM3-205ENST00000328159 UBQLN4Q9NRR5 601 aa13.75□□□□□ -0.21
TPM3-205ENST00000328159 C20orf141Q9NUB4 165 aa13.75□□□□□ -0.21
TPM3-205ENST00000328159 RPS6KB2Q9UBS0 482 aa13.75□□□□□ -0.21
TPM3-205ENST00000328159 MRTO4Q9UKD2 239 aaKnown RBP13.75□□□□□ -0.21
TPM3-205ENST00000328159 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.75□□□□□ -0.21
TPM3-205ENST00000328159 SLC35A3Q9Y2D2 325 aa13.75□□□□□ -0.21
TPM3-205ENST00000328159 LAMA1P25391 3075 aa13.75□□□□□ -0.21
TPM3-205ENST00000328159 COL6A3P12111 3177 aa13.74□□□□□ -0.21
TPM3-205ENST00000328159 TGFBR2P37173 567 aa13.74□□□□□ -0.21
TPM3-205ENST00000328159 RBM34P42696 430 aaKnown RBP13.74□□□□□ -0.21
TPM3-205ENST00000328159 CTBP2P56545 445 aa13.74□□□□□ -0.21
TPM3-205ENST00000328159 AQP6Q13520 282 aa13.74□□□□□ -0.21
TPM3-205ENST00000328159 NCF4Q15080 339 aa13.74□□□□□ -0.21
TPM3-205ENST00000328159 EBPQ15125 230 aaKnown RBP13.74□□□□□ -0.21
TPM3-205ENST00000328159 LPAL2Q16609 132 aa13.74□□□□□ -0.21
TPM3-205ENST00000328159 TIGD6Q17RP2 521 aa13.74□□□□□ -0.21
TPM3-205ENST00000328159 PGGHGQ32M88 737 aa13.74□□□□□ -0.21
TPM3-205ENST00000328159 NKAIN1Q4KMZ8 207 aa13.74□□□□□ -0.21
TPM3-205ENST00000328159 PHF19Q5T6S3 580 aa13.74□□□□□ -0.21
TPM3-205ENST00000328159 HLA-DQA1Q5Y7H0 255 aa13.74□□□□□ -0.21
TPM3-205ENST00000328159 SLC30A6Q6NXT4 461 aa13.74□□□□□ -0.21
TPM3-205ENST00000328159 PRR23CQ6ZRP0 262 aa13.74□□□□□ -0.21
TPM3-205ENST00000328159 SHISA6Q6ZSJ9 500 aa13.74□□□□□ -0.21
TPM3-205ENST00000328159 LANCL3Q6ZV70 420 aa13.74□□□□□ -0.21
TPM3-205ENST00000328159 TMPRSS11FQ6ZWK6 438 aa13.74□□□□□ -0.21
TPM3-205ENST00000328159 C9orf40Q8IXQ3 194 aa13.74□□□□□ -0.21
TPM3-205ENST00000328159 ZNF440Q8IYI8 595 aa13.74□□□□□ -0.21
TPM3-205ENST00000328159 CYP4Z2PQ8N1L4 340 aa13.74□□□□□ -0.21
TPM3-205ENST00000328159 CADM2Q8N3J6 435 aa13.74□□□□□ -0.21
TPM3-205ENST00000328159 ZNF527Q8NB42 609 aa13.74□□□□□ -0.21
TPM3-205ENST00000328159 BRIX1Q8TDN6 353 aaKnown RBP13.74□□□□□ -0.21
TPM3-205ENST00000328159 BPIFA2Q96DR5 249 aa13.74□□□□□ -0.21
TPM3-205ENST00000328159 TMEM80Q96HE8 168 aa13.74□□□□□ -0.21
TPM3-205ENST00000328159 SAMD8Q96LT4 415 aa13.74□□□□□ -0.21
TPM3-205ENST00000328159 PHOX2BQ99453 314 aa13.74□□□□□ -0.21
TPM3-205ENST00000328159 TAS2R16Q9NYV7 291 aa13.74□□□□□ -0.21
TPM3-205ENST00000328159 COPS7AQ9UBW8 275 aa13.74□□□□□ -0.21
TPM3-205ENST00000328159 HEATR5AQ86XA9 2040 aa13.74□□□□□ -0.21
TPM3-205ENST00000328159 UTS2O95399 124 aa13.73□□□□□ -0.21
TPM3-205ENST00000328159 ZGLP1P0C6A0 271 aa13.73□□□□□ -0.21
TPM3-205ENST00000328159 CD36P16671 472 aa13.73□□□□□ -0.21
TPM3-205ENST00000328159 ADH7P40394 386 aa13.73□□□□□ -0.21
TPM3-205ENST00000328159 DYNC1I2Q13409 638 aaKnown RBP13.73□□□□□ -0.21
TPM3-205ENST00000328159 SPCS2Q15005 226 aa13.73□□□□□ -0.21
TPM3-205ENST00000328159 ALG10BQ5I7T1 473 aa13.73□□□□□ -0.21
TPM3-205ENST00000328159 FAAH2Q6GMR7 532 aa13.73□□□□□ -0.21
TPM3-205ENST00000328159 ULK3Q6PHR2 472 aa13.73□□□□□ -0.21
TPM3-205ENST00000328159 KIRREL2Q6UWL6 708 aa13.73□□□□□ -0.21
TPM3-205ENST00000328159 LINC00114Q6XXX2 140 aa13.73□□□□□ -0.21
TPM3-205ENST00000328159 ZNF367Q7RTV3 350 aa13.73□□□□□ -0.21
TPM3-205ENST00000328159 OR1N1Q8NGS0 311 aa13.73□□□□□ -0.21
TPM3-205ENST00000328159 FANK1Q8TC84 345 aa13.73□□□□□ -0.21
TPM3-205ENST00000328159 ZNF426Q9BUY5 554 aa13.73□□□□□ -0.21
TPM3-205ENST00000328159 OR52D1Q9H346 318 aa13.73□□□□□ -0.21
TPM3-205ENST00000328159 TIMMDC1Q9NPL8 285 aa13.73□□□□□ -0.21
TPM3-205ENST00000328159 MEPEQ9NQ76 525 aaPredicted RBP13.73□□□□□ -0.21
TPM3-205ENST00000328159 OR6C76A6NM76 312 aa13.73□□□□□ -0.21
TPM3-205ENST00000328159 KDM4EB2RXH2 506 aaPredicted RBP13.73□□□□□ -0.21
TPM3-205ENST00000328159 SCDO00767 359 aa13.73□□□□□ -0.21
TPM3-205ENST00000328159 SURF4O15260 269 aa13.73□□□□□ -0.21
TPM3-205ENST00000328159 BCL10O95999 233 aa13.73□□□□□ -0.21
TPM3-205ENST00000328159 HBQ1P09105 142 aa13.73□□□□□ -0.21
TPM3-205ENST00000328159 HPGDP15428 266 aa13.73□□□□□ -0.21
TPM3-205ENST00000328159 ZNF182P17025 639 aaPredicted RBP13.73□□□□□ -0.21
TPM3-205ENST00000328159 FUT1P19526 365 aa13.73□□□□□ -0.21
TPM3-205ENST00000328159 CSTF2P33240 577 aaKnown RBP eCLIP13.73□□□□□ -0.21
TPM3-205ENST00000328159 LIPAP38571 399 aa13.73□□□□□ -0.21
TPM3-205ENST00000328159 MLLT10P55197 1068 aa13.73□□□□□ -0.21
TPM3-205ENST00000328159 DCDP81605 110 aaKnown RBP13.73□□□□□ -0.21
TPM3-205ENST00000328159 FNDC7Q5VTL7 733 aa13.73□□□□□ -0.21
TPM3-205ENST00000328159 SLC29A4Q7RTT9 530 aa13.73□□□□□ -0.21
TPM3-205ENST00000328159 BMP8AQ7Z5Y6 402 aa13.73□□□□□ -0.21
TPM3-205ENST00000328159 PRR22Q8IZ63 422 aa13.73□□□□□ -0.21
TPM3-205ENST00000328159 GATSQ8NAP1 163 aa13.73□□□□□ -0.21
TPM3-205ENST00000328159 ZBTB44Q8NCP5 570 aa13.73□□□□□ -0.21
TPM3-205ENST00000328159 FAM71CQ8NEG0 241 aa13.73□□□□□ -0.21
TPM3-205ENST00000328159 OR2T33Q8NG76 320 aa13.73□□□□□ -0.21
TPM3-205ENST00000328159 PLEKHA8Q96JA3 519 aa13.73□□□□□ -0.21
TPM3-205ENST00000328159 WWTR1Q9GZV5 400 aa13.73□□□□□ -0.21
TPM3-205ENST00000328159 HHATLQ9HCP6 504 aa13.73□□□□□ -0.21
TPM3-205ENST00000328159 MED17Q9NVC6 651 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms