RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 FNDC11Q9BVV2 318 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 PRR14Q9BWN1 585 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 ANKRD19PQ9H560 264 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 NMNAT1Q9HAN9 279 aaPredicted RBP9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 GALNT9Q9HCQ5 603 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 SDHAF3Q9NRP4 125 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 ACER3Q9NUN7 267 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 STMN3Q9NZ72 180 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 CNIH4Q9P003 139 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 IGLV3-32A0A0A0MS00 114 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 A0A1W2PRQ8 180 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 TRAPPC13A5PLN9 417 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 ANKRD33BA6NCL7 494 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 PEX1O43933 1283 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 CCL3P10147 92 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 THRBP10828 461 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 UQCRBP14927 111 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 HOXD11P31277 338 aaPredicted RBP9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 P2RX1P51575 399 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 HMGA2P52926 109 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 SUMO3P55854 103 aaPredicted RBP9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 TUBA3CQ13748 450 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 DGCR6Q14129 220 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 OR1Q1Q15612 314 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 EXOC3L2Q2M3D2 409 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 SLC22A10Q63ZE4 541 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 TUBA3EQ6PEY2 450 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 HIPK1Q86Z02 1210 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 ZDHHC13Q8IUH4 622 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 LSMEM1Q8N8F7 131 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 OR5W2Q8NH69 310 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 ADAMTS16Q8TE57 1224 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 SDCCAG3Q96C92 435 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 SLC41A3Q96GZ6 507 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 SH3YL1Q96HL8 342 aaPredicted RBP9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 FRMD6Q96NE9 622 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 UTP23Q9BRU9 249 aaKnown RBP9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 ANGPTL4Q9BY76 406 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 KLHL4Q9C0H6 718 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 GABARAPL1Q9H0R8 117 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 TMEM27Q9HBJ8 222 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 CTPS2Q9NRF8 586 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 MAN2C1Q9NTJ4 1040 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 ICAM5Q9UMF0 924 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 U3KQV3 271 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 HEATR5AQ86XA9 2040 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 ACACAQ13085 2346 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 A6NL46 340 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 C17orf51A8MQB3 221 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 G3V2T6 193 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 RRP8O43159 456 aaKnown RBP9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 ELAVL4P26378 380 aaKnown RBP9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 CCR4P51679 360 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 ST3GAL3Q11203 375 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 MFAP5Q13361 173 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 TRAM2Q15035 370 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 LRRC36Q1X8D7 754 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 FGD3Q5JSP0 725 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 CCDC81Q6ZN84 652 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 B4GALNT2Q8NHY0 566 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 ARSGQ96EG1 525 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 FUZQ9BT04 418 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 RNF32Q9H0A6 362 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 C8orf4Q9NR00 106 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 SACM1LQ9NTJ5 587 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 ANKRD10Q9NXR5 420 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 PPP4R1LQ9P1A2 415 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 KCNMB2Q9Y691 235 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 NCOR2Q9Y618 2525 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 A0A0B4J2E0 115 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 TRBV4-1A0A0J9YWV2 114 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 A0A1B0GWA3 101 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 A0A1B0GX12 115 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 ANKUB1A6NFN9 424 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 CEACAM4O75871 244 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 LYPD3O95274 346 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 RASAL1O95294 804 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 THY1P04216 161 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 LINGO3P0C6S8 592 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 FUT4P22083 530 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 MSX1P28360 303 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 RYKP34925 604 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 ARHGDIAP52565 204 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 COPZ1P61923 177 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 OC90Q02509 493 aaPredicted RBP9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 PPP1R8Q12972 351 aaKnown RBP9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 RAPSNQ13702 412 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 CBFBQ13951 182 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 COL28A1Q2UY09 1125 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 PRAMEF20Q5VT98 475 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 BROXQ5VW32 411 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 LINC00696Q6ZRV3 163 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 GDF7Q7Z4P5 450 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 ZNF227Q86WZ6 799 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 CBR4Q8N4T8 237 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 PACRGLQ8N7B6 248 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 OR52J3Q8NH60 311 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 DUSP19Q8WTR2 217 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 ALPK1Q96QP1 1244 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 PSD2Q9BQI7 771 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms