RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 RPP14O95059 124 aaKnown RBP11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 EIF4EP06730 217 aaKnown RBP11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 UQCRC1P31930 480 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 PSMB10P40306 273 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 RRAS2P62070 204 aaPredicted RBP11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 CRYZQ08257 329 aaKnown RBP11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 FGL2Q14314 439 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 GPR176Q14439 515 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 ODF4Q2M2E3 257 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 TMEM44Q2T9K0 475 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 AGBL4Q5VU57 503 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 AADACL4Q5VUY2 407 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 TMEM64Q6YI46 380 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 FRRS1Q6ZNA5 592 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 SERPINA12Q8IW75 414 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 GPR135Q8IZ08 494 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 OR52E2Q8NGJ4 325 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 SFXN5Q8TD22 340 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 HMGB4Q8WW32 186 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 GCDHQ92947 438 aaPredicted RBP11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 MOAP1Q96BY2 351 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 ZNF707Q96C28 371 aaPredicted RBP11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 ZNF559Q9BR84 538 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 PPIL3Q9H2H8 161 aaKnown RBP11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 SYNPO2LQ9H987 977 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 GNG8Q9UK08 70 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 GTF2A1LQ9UNN4 478 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 KDM4EB2RXH2 506 aaPredicted RBP11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 MAKP20794 623 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 TBXA2RP21731 343 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 GIFP27352 417 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 LINGO2Q7L985 606 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 GID4Q8IVV7 300 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 GATSQ8NAP1 163 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 ZNF431Q8TF32 576 aaPredicted RBP11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 FN3KQ9H479 309 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 SLA2Q9H6Q3 261 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 OR6C74A6NCV1 312 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 SLC9B1P1A6NJY1 282 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 SYT5O00445 386 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 RCBTB2O95199 551 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 F8A1P23610 371 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 SSTR2P30874 369 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 ACSM3Q53FZ2 586 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 EIPR1Q53HC9 387 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 SFRP4Q6FHJ7 346 aaPredicted RBP11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 POMZP3Q6PJE2 187 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 THSD4Q6ZMP0 1018 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 MEPCEQ7L2J0 689 aaKnown RBP11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 PRSS41Q7RTY9 318 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 OR5H6Q8NGV6 325 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 C17orf50Q8WW18 174 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 PATE1Q8WXA2 126 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 ASB16Q96NS5 453 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 MKRN2Q9H000 416 aaKnown RBP11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 CDCP1Q9H5V8 836 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 LRRN3E7EW58 273 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 PRKNO60260 465 aaPredicted RBP11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 SLC19A2O60779 497 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 TBX19O60806 448 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 STX11O75558 287 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 EML2O95834 649 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 PEPDP12955 493 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 ZNF3P17036 446 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 TYRP1P17643 537 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 FRKP42685 505 aaPredicted RBP11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 CCR6P51684 374 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 SNRPNP63162 240 aaKnown RBP11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 GALK2Q01415 458 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 STX4Q12846 297 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 DECR1Q16698 335 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 SLC25A35Q3KQZ1 300 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 PRSS45Q7RTY3 260 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 FRMD1Q8N878 549 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 GPR174Q9BXC1 333 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 C1QTNF2Q9BXJ5 285 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 LRRN3Q9H3W5 708 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 IL20Q9NYY1 176 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 CDHR4A6H8M9 788 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 ZIC2O95409 532 aaPredicted RBP11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 CEACAM5P06731 702 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 PITPNBP48739 271 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 GZMKP49863 264 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 PGDP52209 483 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 DCST2Q5T1A1 773 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 SFXN4Q6P4A7 337 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 CD300LDQ6UXZ3 194 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 TMEM91Q6ZNR0 172 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 C17orf47Q8NEP4 570 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 OR2M4Q96R27 311 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 APOOQ9BUR5 198 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 TMEM106CQ9BVX2 250 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 C1QTNF7Q9BXJ2 289 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 CACNG6Q9BXT2 260 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 SLC25A18Q9H1K4 315 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 CCDC86Q9H6F5 360 aaKnown RBP11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 MGAT4AQ9UM21 535 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 PCDHGB7Q9Y5F8 929 aa11.98□□□□□ -0.49
HMGCS1-201ENST00000325110 SOX30O94993 753 aa11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 MT-ND4P03905 459 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms