RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 SNUPNO95149 360 aaKnown RBP12.67□□□□□ -0.38
RPP40-201ENST00000319533 SERPINE1P05121 402 aa12.67□□□□□ -0.38
RPP40-201ENST00000319533 LINGO3P0C6S8 592 aa12.67□□□□□ -0.38
RPP40-201ENST00000319533 DANCRP0C864 163 aa12.67□□□□□ -0.38
RPP40-201ENST00000319533 PABPC4LP0CB38 370 aaKnown RBP12.67□□□□□ -0.38
RPP40-201ENST00000319533 ASMTP46597 345 aa12.67□□□□□ -0.38
RPP40-201ENST00000319533 RPS4XP62701 263 aaKnown RBP12.67□□□□□ -0.38
RPP40-201ENST00000319533 LSM11P83369 360 aaKnown RBP eCLIP12.67□□□□□ -0.38
RPP40-201ENST00000319533 HSPB3Q12988 150 aa12.67□□□□□ -0.38
RPP40-201ENST00000319533 PDE7AQ13946 482 aa12.67□□□□□ -0.38
RPP40-201ENST00000319533 DUSP5Q16690 384 aa12.67□□□□□ -0.38
RPP40-201ENST00000319533 UGT3A2Q3SY77 523 aa12.67□□□□□ -0.38
RPP40-201ENST00000319533 RFTN2Q52LD8 501 aaPredicted RBP12.67□□□□□ -0.38
RPP40-201ENST00000319533 ZNF385BQ569K4 471 aa12.67□□□□□ -0.38
RPP40-201ENST00000319533 PDSS1Q5T2R2 415 aa12.67□□□□□ -0.38
RPP40-201ENST00000319533 HBMQ6B0K9 141 aa12.67□□□□□ -0.38
RPP40-201ENST00000319533 HEPHL1Q6MZM0 1159 aa12.67□□□□□ -0.38
RPP40-201ENST00000319533 PPP4R4Q6NUP7 873 aa12.67□□□□□ -0.38
RPP40-201ENST00000319533 ZCCHC12Q6PEW1 402 aa12.67□□□□□ -0.38
RPP40-201ENST00000319533 DNAJC14Q6Y2X3 702 aaPredicted RBP12.67□□□□□ -0.38
RPP40-201ENST00000319533 KIRREL3Q8IZU9 778 aa12.67□□□□□ -0.38
RPP40-201ENST00000319533 SLC16A11Q8NCK7 471 aa12.67□□□□□ -0.38
RPP40-201ENST00000319533 NUP43Q8NFH3 380 aa12.67□□□□□ -0.38
RPP40-201ENST00000319533 ZFP28Q8NHY6 868 aa12.67□□□□□ -0.38
RPP40-201ENST00000319533 RNF128Q8TEB7 428 aa12.67□□□□□ -0.38
RPP40-201ENST00000319533 OSTF1Q92882 214 aa12.67□□□□□ -0.38
RPP40-201ENST00000319533 CIDECQ96AQ7 238 aaPredicted RBP12.67□□□□□ -0.38
RPP40-201ENST00000319533 S100PBPQ96BU1 408 aa12.67□□□□□ -0.38
RPP40-201ENST00000319533 PPCDCQ96CD2 204 aa12.67□□□□□ -0.38
RPP40-201ENST00000319533 KLHL15Q96M94 604 aa12.67□□□□□ -0.38
RPP40-201ENST00000319533 MS4A4EQ96PG1 132 aa12.67□□□□□ -0.38
RPP40-201ENST00000319533 TSSK3Q96PN8 268 aa12.67□□□□□ -0.38
RPP40-201ENST00000319533 GP6Q9HCN6 339 aa12.67□□□□□ -0.38
RPP40-201ENST00000319533 ACSS1Q9NUB1 689 aaPredicted RBP12.67□□□□□ -0.38
RPP40-201ENST00000319533 FBXO34Q9NWN3 711 aa12.67□□□□□ -0.38
RPP40-201ENST00000319533 ZDHHC2Q9UIJ5 367 aa12.67□□□□□ -0.38
RPP40-201ENST00000319533 MXRA5Q9NR99 2828 aa12.67□□□□□ -0.38
RPP40-201ENST00000319533 CHD3Q12873 2000 aaKnown RBP12.66□□□□□ -0.38
RPP40-201ENST00000319533 PEX11AO75192 247 aa12.66□□□□□ -0.38
RPP40-201ENST00000319533 SKAP2O75563 359 aaPredicted RBP12.66□□□□□ -0.38
RPP40-201ENST00000319533 OPN1LWP04000 364 aa12.66□□□□□ -0.38
RPP40-201ENST00000319533 SDC1P18827 310 aa12.66□□□□□ -0.38
RPP40-201ENST00000319533 ME2P23368 584 aa12.66□□□□□ -0.38
RPP40-201ENST00000319533 ELK4P28324 431 aa12.66□□□□□ -0.38
RPP40-201ENST00000319533 ADH6P28332 368 aa12.66□□□□□ -0.38
RPP40-201ENST00000319533 ARRB2P32121 409 aa12.66□□□□□ -0.38
RPP40-201ENST00000319533 GPC1P35052 558 aa12.66□□□□□ -0.38
RPP40-201ENST00000319533 HPCAL1P37235 193 aa12.66□□□□□ -0.38
RPP40-201ENST00000319533 EIF1P41567 113 aaKnown RBP12.66□□□□□ -0.38
RPP40-201ENST00000319533 ZNF41P51814 821 aaPredicted RBP12.66□□□□□ -0.38
RPP40-201ENST00000319533 CARD18P57730 90 aa12.66□□□□□ -0.38
RPP40-201ENST00000319533 ABCE1P61221 599 aaKnown RBP12.66□□□□□ -0.38
RPP40-201ENST00000319533 MAGOHP61326 146 aaKnown RBP12.66□□□□□ -0.38
RPP40-201ENST00000319533 RNPS1Q15287 305 aaKnown RBP12.66□□□□□ -0.38
RPP40-201ENST00000319533 CD226Q15762 336 aa12.66□□□□□ -0.38
RPP40-201ENST00000319533 ZNF239Q16600 458 aaKnown RBP12.66□□□□□ -0.38
RPP40-201ENST00000319533 CLEC12BQ2HXU8 276 aa12.66□□□□□ -0.38
RPP40-201ENST00000319533 XKR7Q5GH72 579 aa12.66□□□□□ -0.38
RPP40-201ENST00000319533 NCMAPQ5T1S8 102 aa12.66□□□□□ -0.38
RPP40-201ENST00000319533 HHATQ5VTY9 493 aa12.66□□□□□ -0.38
RPP40-201ENST00000319533 ANKRD26P1Q6NSI1 321 aa12.66□□□□□ -0.38
RPP40-201ENST00000319533 FIGNL1Q6PIW4 674 aa12.66□□□□□ -0.38
RPP40-201ENST00000319533 TFAP2EQ6VUC0 442 aa12.66□□□□□ -0.38
RPP40-201ENST00000319533 R3HCC1LQ7Z5L2 792 aaKnown RBP12.66□□□□□ -0.38
RPP40-201ENST00000319533 LILRA2Q8N149 483 aa12.66□□□□□ -0.38
RPP40-201ENST00000319533 ANKRD42Q8N9B4 389 aa12.66□□□□□ -0.38
RPP40-201ENST00000319533 GATSQ8NAP1 163 aa12.66□□□□□ -0.38
RPP40-201ENST00000319533 B4GALNT2Q8NHY0 566 aa12.66□□□□□ -0.38
RPP40-201ENST00000319533 RAB3IL1Q8TBN0 382 aa12.66□□□□□ -0.38
RPP40-201ENST00000319533 ZBED6CLQ96FA7 236 aaPredicted RBP12.66□□□□□ -0.38
RPP40-201ENST00000319533 PAIP2Q9BPZ3 127 aaKnown RBP12.66□□□□□ -0.38
RPP40-201ENST00000319533 USB1Q9BQ65 265 aaKnown RBP12.66□□□□□ -0.38
RPP40-201ENST00000319533 TACO1Q9BSH4 297 aaKnown RBP12.66□□□□□ -0.38
RPP40-201ENST00000319533 REEP4Q9H6H4 257 aa12.66□□□□□ -0.38
RPP40-201ENST00000319533 LAMP3Q9UQV4 416 aa12.66□□□□□ -0.38
RPP40-201ENST00000319533 RNF115Q9Y4L5 304 aa12.66□□□□□ -0.38
RPP40-201ENST00000319533 HMGB1P1B2RPK0 211 aaPredicted RBP12.65□□□□□ -0.38
RPP40-201ENST00000319533 SCDO00767 359 aa12.65□□□□□ -0.38
RPP40-201ENST00000319533 AKAP10O43572 662 aa12.65□□□□□ -0.38
RPP40-201ENST00000319533 EFNA2O43921 213 aa12.65□□□□□ -0.38
RPP40-201ENST00000319533 LYPLA1O75608 230 aaPredicted RBP12.65□□□□□ -0.38
RPP40-201ENST00000319533 SOD3P08294 240 aa12.65□□□□□ -0.38
RPP40-201ENST00000319533 DHRS4L1P0CG22 281 aa12.65□□□□□ -0.38
RPP40-201ENST00000319533 SHC1P29353 583 aa12.65□□□□□ -0.38
RPP40-201ENST00000319533 RPL3P39023 403 aaKnown RBP12.65□□□□□ -0.38
RPP40-201ENST00000319533 PRIM2P49643 509 aa12.65□□□□□ -0.38
RPP40-201ENST00000319533 PRKAG1P54619 331 aa12.65□□□□□ -0.38
RPP40-201ENST00000319533 MANFP55145 182 aaKnown RBP12.65□□□□□ -0.38
RPP40-201ENST00000319533 MLC1Q15049 377 aa12.65□□□□□ -0.38
RPP40-201ENST00000319533 SFRP5Q5T4F7 317 aa12.65□□□□□ -0.38
RPP40-201ENST00000319533 SEZ6L2Q6UXD5 910 aa12.65□□□□□ -0.38
RPP40-201ENST00000319533 DNM1P46Q6ZS02 220 aa12.65□□□□□ -0.38
RPP40-201ENST00000319533 NUFIP2Q7Z417 695 aaKnown RBP12.65□□□□□ -0.38
RPP40-201ENST00000319533 MTERF4Q7Z6M4 381 aaKnown RBP12.65□□□□□ -0.38
RPP40-201ENST00000319533 GOLGA6L1Q8N7Z2 621 aa12.65□□□□□ -0.38
RPP40-201ENST00000319533 FNDC5Q8NAU1 212 aa12.65□□□□□ -0.38
RPP40-201ENST00000319533 CLHC1Q8NHS4 586 aa12.65□□□□□ -0.38
RPP40-201ENST00000319533 ROBO4Q8WZ75 1007 aa12.65□□□□□ -0.38
RPP40-201ENST00000319533 HSD17B8Q92506 261 aa12.65□□□□□ -0.38
RPP40-201ENST00000319533 CPNE4Q96A23 557 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms