RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 HMGN2P05204 90 aaKnown RBP12.14□□□□□ -0.47
CPNE1-201ENST00000317677 FAM157BP0CG42 384 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 FPR1P21462 350 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 DNAJA1P31689 397 aaKnown RBP12.14□□□□□ -0.47
CPNE1-201ENST00000317677 MC3RP41968 323 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 CAPZBP47756 277 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 CLDN20P56880 219 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 RPP38P78345 283 aaKnown RBP12.14□□□□□ -0.47
CPNE1-201ENST00000317677 FLI1Q01543 452 aaPredicted RBP12.14□□□□□ -0.47
CPNE1-201ENST00000317677 BTN1A1Q13410 526 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 PUM1Q14671 1186 aaKnown RBP eCLIP12.14□□□□□ -0.47
CPNE1-201ENST00000317677 IGSF11Q5DX21 431 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 DBX2Q6ZNG2 339 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 P3H2Q8IVL5 708 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 ENTHD1Q8IYW4 607 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 GGHQ92820 318 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 KAT2AQ92830 837 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 RERGQ96A58 199 aaPredicted RBP12.14□□□□□ -0.47
CPNE1-201ENST00000317677 ELP4Q96EB1 424 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 SPACA7Q96KW9 195 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 PPIL3Q9H2H8 161 aaKnown RBP12.14□□□□□ -0.47
CPNE1-201ENST00000317677 UCK1Q9HA47 277 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 MCCC2Q9HCC0 563 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 RBFOX1Q9NWB1 397 aaKnown RBP12.14□□□□□ -0.47
CPNE1-201ENST00000317677 SAMHD1Q9Y3Z3 626 aaKnown RBP12.14□□□□□ -0.47
CPNE1-201ENST00000317677 CMAHPQ9Y471 501 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 HRH3Q9Y5N1 445 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 SDK1Q7Z5N4 2213 aa12.13□□□□□ -0.47
CPNE1-201ENST00000317677 NINQ8N4C6 2090 aa12.13□□□□□ -0.47
CPNE1-201ENST00000317677 LILRA5A6NI73 299 aa12.13□□□□□ -0.47
CPNE1-201ENST00000317677 HCN1O60741 890 aa12.13□□□□□ -0.47
CPNE1-201ENST00000317677 GALR3O60755 368 aaPredicted RBP12.13□□□□□ -0.47
CPNE1-201ENST00000317677 S100A6P06703 90 aa12.13□□□□□ -0.47
CPNE1-201ENST00000317677 PROS1P07225 676 aa12.13□□□□□ -0.47
CPNE1-201ENST00000317677 HAAOP46952 286 aa12.13□□□□□ -0.47
CPNE1-201ENST00000317677 GABRA4P48169 554 aa12.13□□□□□ -0.47
CPNE1-201ENST00000317677 MAN2A2P49641 1150 aa12.13□□□□□ -0.47
CPNE1-201ENST00000317677 MAP2K6P52564 334 aa12.13□□□□□ -0.47
CPNE1-201ENST00000317677 PRKAG1P54619 331 aa12.13□□□□□ -0.47
CPNE1-201ENST00000317677 GFERP55789 205 aa12.13□□□□□ -0.47
CPNE1-201ENST00000317677 LASP1Q14847 261 aaKnown RBP12.13□□□□□ -0.47
CPNE1-201ENST00000317677 LARS2Q15031 903 aaKnown RBP12.13□□□□□ -0.47
CPNE1-201ENST00000317677 PDZK1Q5T2W1 519 aa12.13□□□□□ -0.47
CPNE1-201ENST00000317677 MZT2BQ6NZ67 158 aa12.13□□□□□ -0.47
CPNE1-201ENST00000317677 FAM111BQ6SJ93 734 aa12.13□□□□□ -0.47
CPNE1-201ENST00000317677 SLC36A4Q6YBV0 504 aa12.13□□□□□ -0.47
CPNE1-201ENST00000317677 ABHD13Q7L211 337 aa12.13□□□□□ -0.47
CPNE1-201ENST00000317677 OR4C15Q8NGM1 316 aa12.13□□□□□ -0.47
CPNE1-201ENST00000317677 RADILQ96JH8 1075 aa12.13□□□□□ -0.47
CPNE1-201ENST00000317677 WACQ9BTA9 647 aa12.13□□□□□ -0.47
CPNE1-201ENST00000317677 ZNF416Q9BWM5 594 aa12.13□□□□□ -0.47
CPNE1-201ENST00000317677 DUSP15Q9H1R2 295 aaPredicted RBP12.13□□□□□ -0.47
CPNE1-201ENST00000317677 PIGUQ9H490 435 aa12.13□□□□□ -0.47
CPNE1-201ENST00000317677 FANCFQ9NPI8 374 aa12.13□□□□□ -0.47
CPNE1-201ENST00000317677 PCDHB16Q9NRJ7 776 aa12.13□□□□□ -0.47
CPNE1-201ENST00000317677 THSD1Q9NS62 852 aa12.13□□□□□ -0.47
CPNE1-201ENST00000317677 MED9Q9NWA0 146 aa12.13□□□□□ -0.47
CPNE1-201ENST00000317677 THUMPD1Q9NXG2 353 aaKnown RBP12.13□□□□□ -0.47
CPNE1-201ENST00000317677 SPTBP11277 2137 aa12.13□□□□□ -0.47
CPNE1-201ENST00000317677 GVINP1Q7Z2Y8 2422 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 URADA6NGE7 173 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 PRSS44E7EML9 344 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 FAM227AF5H4B4 570 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 CYR61O00622 381 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 CASC3O15234 703 aaKnown RBP12.12□□□□□ -0.47
CPNE1-201ENST00000317677 SEMA7AO75326 666 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 CHRM4P08173 479 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 CLEC2LP0C7M8 214 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 GIMD1P0DJR0 217 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 BUD31P41223 144 aaPredicted RBP12.12□□□□□ -0.47
CPNE1-201ENST00000317677 MAP2K3P46734 347 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 HNRNPKP61978 463 aaKnown RBP eCLIP12.12□□□□□ -0.47
CPNE1-201ENST00000317677 ID2Q02363 134 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 NPRL3Q12980 569 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 LCN1P1Q5VSP4 162 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 ARMC6Q6NXE6 501 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 FAM92BQ6ZTR7 304 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 ZNF605Q86T29 641 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 SLC30A8Q8IWU4 369 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 CA13Q8N1Q1 262 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 STX19Q8N4C7 294 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 OR7G2Q8NG99 324 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 OR4D11Q8NGI4 311 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 DOK4Q8TEW6 326 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 XAGE5Q8WWM1 108 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 CDCA4Q9BXL8 241 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 BARHL1Q9BZE3 327 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 RACGAP1Q9H0H5 632 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 LYRM4Q9HD34 91 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 SEMA3GQ9NS98 782 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 PDP1Q9P0J1 537 aaPredicted RBP12.12□□□□□ -0.47
CPNE1-201ENST00000317677 STUB1Q9UNE7 303 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 ZNF451Q9Y4E5 1061 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 CACNG2Q9Y698 323 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 ZNF780BQ9Y6R6 833 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 A0A1B0GVT2 93 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 SGK494L7N484 410 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 BCAT2O15382 392 aaPredicted RBP12.12□□□□□ -0.47
CPNE1-201ENST00000317677 EMC8O43402 210 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 SLC28A2O43868 658 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms