RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 ZNF264O43296 627 aa15.9■□□□□ 0.14
TPM1-203ENST00000317516 STX11O75558 287 aa15.9■□□□□ 0.14
TPM1-203ENST00000317516 NPIPA8P0DM63 369 aa15.9■□□□□ 0.14
TPM1-203ENST00000317516 PPP3CBP16298 524 aa15.9■□□□□ 0.14
TPM1-203ENST00000317516 KLK2P20151 261 aa15.9■□□□□ 0.14
TPM1-203ENST00000317516 BGNP21810 368 aa15.9■□□□□ 0.14
TPM1-203ENST00000317516 CRYGSP22914 178 aa15.9■□□□□ 0.14
TPM1-203ENST00000317516 SFTPDP35247 375 aa15.9■□□□□ 0.14
TPM1-203ENST00000317516 CLNS1AP54105 237 aaKnown RBP15.9■□□□□ 0.14
TPM1-203ENST00000317516 FOXF1Q12946 379 aa15.9■□□□□ 0.14
TPM1-203ENST00000317516 EXOC3L2Q2M3D2 409 aa15.9■□□□□ 0.14
TPM1-203ENST00000317516 DPY19L1Q2PZI1 675 aa15.9■□□□□ 0.14
TPM1-203ENST00000317516 TNFAIP8L3Q5GJ75 292 aa15.9■□□□□ 0.14
TPM1-203ENST00000317516 ATAD3BQ5T9A4 648 aa15.9■□□□□ 0.14
TPM1-203ENST00000317516 HHATQ5VTY9 493 aa15.9■□□□□ 0.14
TPM1-203ENST00000317516 CBLN3Q6UW01 205 aa15.9■□□□□ 0.14
TPM1-203ENST00000317516 BEND4Q6ZU67 534 aa15.9■□□□□ 0.14
TPM1-203ENST00000317516 CLECL1Q8IZS7 167 aa15.9■□□□□ 0.14
TPM1-203ENST00000317516 OR5D16Q8NGK9 328 aa15.9■□□□□ 0.14
TPM1-203ENST00000317516 OR5W2Q8NH69 310 aa15.9■□□□□ 0.14
TPM1-203ENST00000317516 FBXO27Q8NI29 283 aa15.9■□□□□ 0.14
TPM1-203ENST00000317516 GPR119Q8TDV5 335 aa15.9■□□□□ 0.14
TPM1-203ENST00000317516 CPNE4Q96A23 557 aaPredicted RBP15.9■□□□□ 0.14
TPM1-203ENST00000317516 TESCQ96BS2 214 aa15.9■□□□□ 0.14
TPM1-203ENST00000317516 SLC35G5Q96KT7 338 aa15.9■□□□□ 0.14
TPM1-203ENST00000317516 MRGPRX4Q96LA9 322 aa15.9■□□□□ 0.14
TPM1-203ENST00000317516 C20orf27Q9GZN8 174 aa15.9■□□□□ 0.14
TPM1-203ENST00000317516 C6orf203Q9P0P8 240 aaPredicted RBP15.9■□□□□ 0.14
TPM1-203ENST00000317516 HAO1Q9UJM8 370 aa15.9■□□□□ 0.14
TPM1-203ENST00000317516 CLEC4AQ9UMR7 237 aa15.9■□□□□ 0.14
TPM1-203ENST00000317516 PRRC2AP48634 2157 aaKnown RBP15.9■□□□□ 0.14
TPM1-203ENST00000317516 MED12LQ86YW9 2145 aa15.89■□□□□ 0.13
TPM1-203ENST00000317516 UBL4AP11441 157 aa15.89■□□□□ 0.13
TPM1-203ENST00000317516 UQCRC2P22695 453 aa15.89■□□□□ 0.13
TPM1-203ENST00000317516 RPS26P62854 115 aaKnown RBP15.89■□□□□ 0.13
TPM1-203ENST00000317516 CBFBQ13951 182 aa15.89■□□□□ 0.13
TPM1-203ENST00000317516 RNPS1Q15287 305 aaKnown RBP15.89■□□□□ 0.13
TPM1-203ENST00000317516 GPR68Q15743 365 aa15.89■□□□□ 0.13
TPM1-203ENST00000317516 ARHGAP11BQ3KRB8 267 aa15.89■□□□□ 0.13
TPM1-203ENST00000317516 TMEM176BQ3YBM2 270 aaPredicted RBP15.89■□□□□ 0.13
TPM1-203ENST00000317516 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.89■□□□□ 0.13
TPM1-203ENST00000317516 C16orf62Q7Z3J2 963 aa15.89■□□□□ 0.13
TPM1-203ENST00000317516 TMCO5AQ8N6Q1 288 aa15.89■□□□□ 0.13
TPM1-203ENST00000317516 RFWD2Q8NHY2 731 aa15.89■□□□□ 0.13
TPM1-203ENST00000317516 MIPOL1Q8TD10 442 aa15.89■□□□□ 0.13
TPM1-203ENST00000317516 ARSGQ96EG1 525 aa15.89■□□□□ 0.13
TPM1-203ENST00000317516 SORT1Q99523 831 aa15.89■□□□□ 0.13
TPM1-203ENST00000317516 NUF2Q9BZD4 464 aa15.89■□□□□ 0.13
TPM1-203ENST00000317516 BEX4Q9NWD9 120 aaPredicted RBP15.89■□□□□ 0.13
TPM1-203ENST00000317516 SERINC4A6NH21 518 aa15.88■□□□□ 0.13
TPM1-203ENST00000317516 CPSF4O95639 269 aaKnown RBP15.88■□□□□ 0.13
TPM1-203ENST00000317516 PRKCAP17252 672 aa15.88■□□□□ 0.13
TPM1-203ENST00000317516 MPP2Q14168 576 aa15.88■□□□□ 0.13
TPM1-203ENST00000317516 ZNF141Q15928 474 aa15.88■□□□□ 0.13
TPM1-203ENST00000317516 TMEM201Q5SNT2 666 aa15.88■□□□□ 0.13
TPM1-203ENST00000317516 PDZK1Q5T2W1 519 aa15.88■□□□□ 0.13
TPM1-203ENST00000317516 XAGE5Q8WWM1 108 aa15.88■□□□□ 0.13
TPM1-203ENST00000317516 OIT3Q8WWZ8 545 aa15.88■□□□□ 0.13
TPM1-203ENST00000317516 PIK3IP1Q96FE7 263 aa15.88■□□□□ 0.13
TPM1-203ENST00000317516 KLHDC3Q9BQ90 382 aa15.88■□□□□ 0.13
TPM1-203ENST00000317516 LAT2Q9GZY6 243 aa15.88■□□□□ 0.13
TPM1-203ENST00000317516 MEAF6Q9HAF1 191 aa15.88■□□□□ 0.13
TPM1-203ENST00000317516 GP6Q9HCN6 339 aa15.88■□□□□ 0.13
TPM1-203ENST00000317516 ITPR3Q14573 2671 aa15.88■□□□□ 0.13
TPM1-203ENST00000317516 MTORP42345 2549 aa15.88■□□□□ 0.13
TPM1-203ENST00000317516 AKAP9Q99996 3911 aa15.88■□□□□ 0.13
TPM1-203ENST00000317516 MED13LQ71F56 2210 aa15.87■□□□□ 0.13
TPM1-203ENST00000317516 DEFB108AA8MXU0 73 aa15.87■□□□□ 0.13
TPM1-203ENST00000317516 OIP5O43482 229 aa15.87■□□□□ 0.13
TPM1-203ENST00000317516 FCMRO60667 390 aa15.87■□□□□ 0.13
TPM1-203ENST00000317516 GUSBP08236 651 aa15.87■□□□□ 0.13
TPM1-203ENST00000317516 CD53P19397 219 aa15.87■□□□□ 0.13
TPM1-203ENST00000317516 FPR1P21462 350 aa15.87■□□□□ 0.13
TPM1-203ENST00000317516 SLC7A1P30825 629 aa15.87■□□□□ 0.13
TPM1-203ENST00000317516 S100A3P33764 101 aa15.87■□□□□ 0.13
TPM1-203ENST00000317516 RNF144AP50876 292 aaPredicted RBP15.87■□□□□ 0.13
TPM1-203ENST00000317516 CCR4P51679 360 aa15.87■□□□□ 0.13
TPM1-203ENST00000317516 BST1Q10588 318 aa15.87■□□□□ 0.13
TPM1-203ENST00000317516 SELENBP1Q13228 472 aa15.87■□□□□ 0.13
TPM1-203ENST00000317516 SLC25A53Q5H9E4 307 aa15.87■□□□□ 0.13
TPM1-203ENST00000317516 ANKRD34AQ69YU3 496 aa15.87■□□□□ 0.13
TPM1-203ENST00000317516 OGFOD2Q6N063 350 aa15.87■□□□□ 0.13
TPM1-203ENST00000317516 EIF3MQ7L2H7 374 aaKnown RBP15.87■□□□□ 0.13
TPM1-203ENST00000317516 ZNF550Q7Z398 422 aa15.87■□□□□ 0.13
TPM1-203ENST00000317516 ANKRD46Q86W74 232 aa15.87■□□□□ 0.13
TPM1-203ENST00000317516 CLEC4FQ8N1N0 589 aa15.87■□□□□ 0.13
TPM1-203ENST00000317516 SLC43A2Q8N370 569 aa15.87■□□□□ 0.13
TPM1-203ENST00000317516 ANKRD42Q8N9B4 389 aa15.87■□□□□ 0.13
TPM1-203ENST00000317516 ATP6V1C2Q8NEY4 427 aa15.87■□□□□ 0.13
TPM1-203ENST00000317516 TMEM234Q8WY98 164 aa15.87■□□□□ 0.13
TPM1-203ENST00000317516 ROBO4Q8WZ75 1007 aa15.87■□□□□ 0.13
TPM1-203ENST00000317516 PIGTQ969N2 578 aa15.87■□□□□ 0.13
TPM1-203ENST00000317516 ZC3HAV1LQ96H79 300 aaKnown RBP15.87■□□□□ 0.13
TPM1-203ENST00000317516 OR51I1Q9H343 314 aa15.87■□□□□ 0.13
TPM1-203ENST00000317516 POLE3Q9NRF9 147 aa15.87■□□□□ 0.13
TPM1-203ENST00000317516 SERINC1Q9NRX5 453 aa15.87■□□□□ 0.13
TPM1-203ENST00000317516 PNPOQ9NVS9 261 aa15.87■□□□□ 0.13
TPM1-203ENST00000317516 THAP1Q9NVV9 213 aa15.87■□□□□ 0.13
TPM1-203ENST00000317516 MKLN1Q9UL63 735 aa15.87■□□□□ 0.13
TPM1-203ENST00000317516 GPR52Q9Y2T5 361 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms