RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 ACSM5Q6NUN0 579 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 GTF2H2CQ6P1K8 395 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 LRRC28Q86X40 367 aaPredicted RBP6.21□□□□□ -1.42
ZNF540-201ENST00000316433 FAM126BQ8IXS8 530 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 LINC00471Q8N535 108 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 ZNF614Q8N883 585 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 OR13C3Q8NGS6 347 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 OR2L8Q8NGY9 312 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 OR52P1PQ8NH57 321 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 C22orf15Q8WYQ4 148 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 LCORQ96JN0 433 aaPredicted RBP6.21□□□□□ -1.42
ZNF540-201ENST00000316433 C12orf66Q96MD2 445 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 TGM7Q96PF1 710 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 NAA11Q9BSU3 229 aaPredicted RBP6.21□□□□□ -1.42
ZNF540-201ENST00000316433 TMEM208Q9BTX3 173 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 MRPS18CQ9Y3D5 142 aaKnown RBP6.21□□□□□ -1.42
ZNF540-201ENST00000316433 TMEM184BQ9Y519 407 aaPredicted RBP6.21□□□□□ -1.42
ZNF540-201ENST00000316433 GLTPD2A6NH11 291 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 MANBAO00462 879 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 ZNF593O00488 134 aaPredicted RBP6.21□□□□□ -1.42
ZNF540-201ENST00000316433 GAPDHSO14556 408 aaPredicted RBP6.21□□□□□ -1.42
ZNF540-201ENST00000316433 EREGO14944 169 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 TAPBPO15533 448 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 CSO75390 466 aaKnown RBP6.21□□□□□ -1.42
ZNF540-201ENST00000316433 ZNF35P13682 527 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 MYOGP15173 224 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 AHCYP23526 432 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 GIFP27352 417 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 THBS2P35442 1172 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 PMELP40967 661 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 HCCSP53701 268 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 CAV3P56539 151 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 RAP1AP62834 184 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 RBX1P62877 108 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 SLC7A9P82251 487 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 PRR5P85299 388 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 RSU1Q15404 277 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 SPHARQ15513 63 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 PLEKHS1Q5SXH7 462 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 PAQR3Q6TCH7 311 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 QSOX2Q6ZRP7 698 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 BMPERQ8N8U9 685 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 UBAC2Q8NBM4 344 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 OR10Q1Q8NGQ4 319 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 RPLP0P6Q8NHW5 317 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 GAL3ST4Q96RP7 486 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 THUMPD3Q9BV44 507 aaKnown RBP6.21□□□□□ -1.42
ZNF540-201ENST00000316433 ALG8Q9BVK2 526 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 CACNG6Q9BXT2 260 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 MTG2Q9H4K7 406 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 TLR8Q9NR97 1041 aaKnown RBP6.21□□□□□ -1.42
ZNF540-201ENST00000316433 RYDENQ9NUL5 291 aaKnown RBP6.21□□□□□ -1.42
ZNF540-201ENST00000316433 PARPBPQ9NWS1 579 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 MGAT4CQ9UBM8 478 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 RPS6KB2Q9UBS0 482 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 ICKQ9UPZ9 632 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 OR51B4Q9Y5P0 310 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 NPFFR2Q9Y5X5 522 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.2□□□□□ -1.42
ZNF540-201ENST00000316433 IRGMA1A4Y4 181 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 SYNDIG1LA6NDD5 238 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 NCF1BA6NI72 391 aaPredicted RBP6.2□□□□□ -1.42
ZNF540-201ENST00000316433 NCF1CA8MVU1 366 aaPredicted RBP6.2□□□□□ -1.42
ZNF540-201ENST00000316433 TMEM229AB2RXF0 380 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 H0YIV9 168 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 GFYI3L273 518 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 LRRTM2O43300 516 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 OR2T1O43869 369 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 MT-ND4LP03901 98 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 HIST1H2ABP04908 130 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 HTR2AP28223 471 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 RPIAP49247 311 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 CDK6Q00534 326 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 TWF1Q12792 350 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 KCNMB1Q16558 191 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 CRB2Q5IJ48 1285 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 C1orf185Q5T7R7 199 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 LPCAT3Q6P1A2 487 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 MTFR2Q6P444 385 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 MZT2AQ6P582 158 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 HIST3H2AQ7L7L0 130 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 TMEM130Q8N3G9 435 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 BOLLQ8N9W6 283 aaKnown RBP6.2□□□□□ -1.42
ZNF540-201ENST00000316433 OR6K3Q8NGY3 331 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 FGF11Q92914 225 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 HIST1H2ACQ93077 130 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 ATF6BQ99941 703 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 FUZQ9BT04 418 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 NDUFAF3Q9BU61 184 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 SLC12A9Q9BXP2 914 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 MFRPQ9BY79 579 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 GAL3ST2Q9H3Q3 398 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 SMOC1Q9H4F8 434 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 BEX1Q9HBH7 125 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 SLC25A19Q9HC21 320 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 ENAMQ9NRM1 1142 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 GAR1Q9NY12 217 aaKnown RBP6.2□□□□□ -1.42
ZNF540-201ENST00000316433 MOKQ9UQ07 419 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 RNASET2O00584 256 aaKnown RBP6.2□□□□□ -1.42
ZNF540-201ENST00000316433 MID1O15344 667 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms