RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 PUSL1Q8N0Z8 303 aaKnown RBP8.9□□□□□ -0.99
RBFOX1-201ENST00000311745 Q8N402 240 aa8.9□□□□□ -0.99
RBFOX1-201ENST00000311745 SELENOMQ8WWX9 145 aa8.9□□□□□ -0.99
RBFOX1-201ENST00000311745 ROBO4Q8WZ75 1007 aa8.9□□□□□ -0.99
RBFOX1-201ENST00000311745 OTUB2Q96DC9 234 aa8.9□□□□□ -0.99
RBFOX1-201ENST00000311745 ZBED6CLQ96FA7 236 aaPredicted RBP8.9□□□□□ -0.99
RBFOX1-201ENST00000311745 HIST1H2AHQ96KK5 128 aa8.9□□□□□ -0.99
RBFOX1-201ENST00000311745 HIST1H2AJQ99878 128 aa8.9□□□□□ -0.99
RBFOX1-201ENST00000311745 H2AFJQ9BTM1 129 aa8.9□□□□□ -0.99
RBFOX1-201ENST00000311745 NCOR1P1Q9H4R4 102 aa8.9□□□□□ -0.99
RBFOX1-201ENST00000311745 DUSP21Q9H596 190 aa8.9□□□□□ -0.99
RBFOX1-201ENST00000311745 ACTR8Q9H981 624 aa8.9□□□□□ -0.99
RBFOX1-201ENST00000311745 CMAHPQ9Y471 501 aa8.9□□□□□ -0.99
RBFOX1-201ENST00000311745 PRRC2BQ5JSZ5 2229 aaKnown RBP8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 RFPL4AA6NLU0 287 aa8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 RFPL4AL1F8VTS6 287 aa8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 LRATO95237 230 aa8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 SNRPCP09234 159 aaKnown RBP8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 ADH5P11766 374 aa8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 CD46P15529 392 aa8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 DDTP30046 118 aa8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 ETV6P41212 452 aa8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 PPM1FP49593 454 aaPredicted RBP8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 GAB1Q13480 694 aa8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 NAE1Q13564 534 aa8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 GUCA2BQ16661 112 aa8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 NHLRC3Q5JS37 347 aa8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 FAM78AQ5JUQ0 283 aa8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 KRBOX4Q5JUW0 171 aa8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 RPL13AP3Q6NVV1 102 aa8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 FAM198BQ6UWH4 519 aa8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 ADHFE1Q8IWW8 467 aa8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 CLECL1Q8IZS7 167 aa8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 C12orf76Q8N812 135 aaPredicted RBP8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 FBXO15Q8NCQ5 510 aaPredicted RBP8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 THAP3Q8WTV1 239 aaPredicted RBP8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 NEIL2Q969S2 332 aa8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 MARS2Q96GW9 593 aaKnown RBP8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 OPA3Q9H6K4 179 aa8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 ZSCAN32Q9NX65 697 aa8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 LRP4O75096 1905 aa8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 A0A1W2PPE3 182 aa8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 A0A1W2PQL4 384 aaPredicted RBP8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 ELOVL7A1L3X0 281 aa8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 WNT9AO14904 365 aa8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 TMIGD3P0DMS9 266 aaPredicted RBP8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 ZNF35P13682 527 aa8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 NPPBP16860 134 aa8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 ITGA3P26006 1051 aa8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 POLR2LP62875 67 aaKnown RBP8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 TRA2AQ13595 282 aaKnown RBP eCLIP8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 TSTQ16762 297 aaKnown RBP8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 AGTRAPQ6RW13 159 aa8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 ETV3LQ6ZN32 361 aa8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 S100A7AQ86SG5 101 aa8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 COMTD1Q86VU5 262 aa8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 TRIM69Q86WT6 500 aa8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 NRSN1Q8IZ57 195 aa8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 SETD9Q8NE22 299 aa8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 OR8J2Q8NGG1 315 aa8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 ZNF675Q8TD23 568 aa8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 ZNF480Q8WV37 535 aa8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 WRAP53Q9BUR4 548 aaKnown RBP8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 SGPP1Q9BX95 441 aa8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 EPHX3Q9H6B9 360 aa8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 H2AFY2Q9P0M6 372 aaPredicted RBP8.89□□□□□ -0.99
RBFOX1-201ENST00000311745 MEX3AA1L020 520 aaKnown RBP8.88□□□□□ -0.99
RBFOX1-201ENST00000311745 PRAMEF25A6NGN4 478 aa8.88□□□□□ -0.99
RBFOX1-201ENST00000311745 HEPACAM2A8MVW5 462 aa8.88□□□□□ -0.99
RBFOX1-201ENST00000311745 MAGEB17A8MXT2 336 aa8.88□□□□□ -0.99
RBFOX1-201ENST00000311745 NUDT19A8MXV4 375 aa8.88□□□□□ -0.99
RBFOX1-201ENST00000311745 LAMP1P11279 417 aa8.88□□□□□ -0.99
RBFOX1-201ENST00000311745 PRPS2P11908 318 aa8.88□□□□□ -0.99
RBFOX1-201ENST00000311745 NME1P15531 152 aaKnown RBP8.88□□□□□ -0.99
RBFOX1-201ENST00000311745 GPX2P18283 190 aa8.88□□□□□ -0.99
RBFOX1-201ENST00000311745 BMP8BP34820 402 aa8.88□□□□□ -0.99
RBFOX1-201ENST00000311745 RPS19P39019 145 aaKnown RBP8.88□□□□□ -0.99
RBFOX1-201ENST00000311745 DGKGP49619 791 aa8.88□□□□□ -0.99
RBFOX1-201ENST00000311745 KRT33BQ14525 404 aa8.88□□□□□ -0.99
RBFOX1-201ENST00000311745 KCNAB1Q14722 419 aa8.88□□□□□ -0.99
RBFOX1-201ENST00000311745 DMRTA1Q5VZB9 504 aa8.88□□□□□ -0.99
RBFOX1-201ENST00000311745 NXPE4Q6UWF7 544 aa8.88□□□□□ -0.99
RBFOX1-201ENST00000311745 BMP8AQ7Z5Y6 402 aa8.88□□□□□ -0.99
RBFOX1-201ENST00000311745 DNAJC22Q8N4W6 341 aa8.88□□□□□ -0.99
RBFOX1-201ENST00000311745 OR9A1PQ8NGU1 263 aa8.88□□□□□ -0.99
RBFOX1-201ENST00000311745 FOXRED1Q96CU9 486 aaPredicted RBP8.88□□□□□ -0.99
RBFOX1-201ENST00000311745 COX14Q96I36 57 aa8.88□□□□□ -0.99
RBFOX1-201ENST00000311745 APOLD1Q96LR9 279 aa8.88□□□□□ -0.99
RBFOX1-201ENST00000311745 PINK1Q9BXM7 581 aa8.88□□□□□ -0.99
RBFOX1-201ENST00000311745 FOLH1BQ9HBA9 442 aa8.88□□□□□ -0.99
RBFOX1-201ENST00000311745 DUSP22Q9NRW4 184 aa8.88□□□□□ -0.99
RBFOX1-201ENST00000311745 SNRNP200O75643 2136 aaKnown RBP8.88□□□□□ -0.99
RBFOX1-201ENST00000311745 GNG14A0A1W2PPG7 69 aa8.88□□□□□ -0.99
RBFOX1-201ENST00000311745 GABRR3A8MPY1 467 aa8.88□□□□□ -0.99
RBFOX1-201ENST00000311745 GRXCR1A8MXD5 290 aa8.88□□□□□ -0.99
RBFOX1-201ENST00000311745 SLC43A1O75387 559 aa8.88□□□□□ -0.99
RBFOX1-201ENST00000311745 ITGB7P26010 798 aa8.88□□□□□ -0.99
RBFOX1-201ENST00000311745 AKT1P31749 480 aa8.88□□□□□ -0.99
RBFOX1-201ENST00000311745 CLDN20P56880 219 aa8.88□□□□□ -0.99
RBFOX1-201ENST00000311745 NUTF2P61970 127 aaKnown RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms