RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 MYBPC1Q00872 1141 aa6.39□□□□□ -1.39
PTCD2-201ENST00000308077 OR1Q1Q15612 314 aa6.39□□□□□ -1.39
PTCD2-201ENST00000308077 RFX4Q33E94 735 aa6.39□□□□□ -1.39
PTCD2-201ENST00000308077 TMEM164Q5U3C3 297 aa6.39□□□□□ -1.39
PTCD2-201ENST00000308077 PGBD2Q6P3X8 592 aa6.39□□□□□ -1.39
PTCD2-201ENST00000308077 TMEM154Q6P9G4 183 aa6.39□□□□□ -1.39
PTCD2-201ENST00000308077 RANBP3LQ86VV4 465 aaPredicted RBP6.39□□□□□ -1.39
PTCD2-201ENST00000308077 GATSQ8NAP1 163 aa6.39□□□□□ -1.39
PTCD2-201ENST00000308077 AQP11Q8NBQ7 271 aa6.39□□□□□ -1.39
PTCD2-201ENST00000308077 FAM71CQ8NEG0 241 aa6.39□□□□□ -1.39
PTCD2-201ENST00000308077 OR11G2Q8NGC1 345 aa6.39□□□□□ -1.39
PTCD2-201ENST00000308077 OR8K3Q8NH51 312 aa6.39□□□□□ -1.39
PTCD2-201ENST00000308077 TP53INP1Q96A56 240 aa6.39□□□□□ -1.39
PTCD2-201ENST00000308077 SLC41A3Q96GZ6 507 aa6.39□□□□□ -1.39
PTCD2-201ENST00000308077 NR1H4Q96RI1 486 aaPredicted RBP6.39□□□□□ -1.39
PTCD2-201ENST00000308077 KLHDC3Q9BQ90 382 aa6.39□□□□□ -1.39
PTCD2-201ENST00000308077 RIBC2Q9H4K1 309 aa6.39□□□□□ -1.39
PTCD2-201ENST00000308077 UBQLN4Q9NRR5 601 aa6.39□□□□□ -1.39
PTCD2-201ENST00000308077 TESQ9UGI8 421 aaKnown RBP6.39□□□□□ -1.39
PTCD2-201ENST00000308077 SLC7A7Q9UM01 511 aa6.39□□□□□ -1.39
PTCD2-201ENST00000308077 FARSAQ9Y285 508 aaKnown RBP6.39□□□□□ -1.39
PTCD2-201ENST00000308077 A0A1W2PQ72 361 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 ADAM10O14672 748 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 OR10H3O60404 316 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 FMO6PO60774 539 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 CSTAP01040 98 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 POU2F1P14859 743 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 PTNP21246 168 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 TBXA2RP21731 343 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 ADH7P40394 386 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 STAT5AP42229 794 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 PNLIPRP2P54317 469 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 FOXK1P85037 733 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 ST3GAL3Q11203 375 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 EPS8Q12929 822 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 DNASE1L3Q13609 305 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 TRAM2Q15035 370 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 BTBD16Q32M84 506 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 KLHL17Q6TDP4 642 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 LYPD8Q6UX82 237 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 WDR88Q6ZMY6 472 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 PPP1R32Q7Z5V6 425 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 CMIPQ8IY22 773 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 NLGN4XQ8N0W4 816 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 CACTIN-AS1Q8N1I8 211 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 ESX1Q8N693 406 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 NLGN4YQ8NFZ3 816 aaPredicted RBP6.38□□□□□ -1.39
PTCD2-201ENST00000308077 OR4K5Q8NGD3 323 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 NR4A3Q92570 626 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 GTPBP3Q969Y2 492 aaKnown RBP6.38□□□□□ -1.39
PTCD2-201ENST00000308077 MUS81Q96NY9 551 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 GPA33Q99795 319 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 PRSS27Q9BQR3 290 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 GABARAPL3Q9BY60 117 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 GRIP2Q9C0E4 1043 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 HOXD1Q9GZZ0 328 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 ARMC7Q9H6L4 198 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 MRTO4Q9UKD2 239 aaKnown RBP6.38□□□□□ -1.39
PTCD2-201ENST00000308077 TMCC3Q9ULS5 477 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 PCDHGA6Q9Y5G7 932 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 ORC6Q9Y5N6 252 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 NPFFR2Q9Y5X5 522 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 DSPP15924 2871 aaKnown RBP6.38□□□□□ -1.39
PTCD2-201ENST00000308077 LOC101059948A0A1B0GTJ6 334 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 LOC100130705A0A1B0GUX0 176 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 TRAPPC13A5PLN9 417 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 DPPA5A6NC42 116 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 A6NHS1 94 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 SCDO00767 359 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 SLC16A6O15403 523 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 PIP5K1CO60331 668 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 RAD1O60671 282 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 PPM1BO75688 479 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 ZFAND5O76080 213 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 CD63P08962 238 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 SMIM18P0DKX4 95 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 CEACAM1P13688 526 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 LCN1P31025 176 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 KRT20P35900 424 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 NOVA1P51513 510 aaKnown RBP6.38□□□□□ -1.39
PTCD2-201ENST00000308077 CHN2P52757 468 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 GABREP78334 506 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 NPRL3Q12980 569 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 SKP2Q13309 424 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 IL10RAQ13651 578 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 CBLN3Q6UW01 205 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 Q6ZPB1 254 aaPredicted RBP6.38□□□□□ -1.39
PTCD2-201ENST00000308077 ZER1Q7Z7L7 766 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 TMPRSS12Q86WS5 348 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 MEX3DQ86XN8 651 aaKnown RBP6.38□□□□□ -1.39
PTCD2-201ENST00000308077 CCDC71Q8IV32 467 aaPredicted RBP6.38□□□□□ -1.39
PTCD2-201ENST00000308077 ZNF527Q8NB42 609 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 POGLUT1Q8NBL1 392 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 ZNF555Q8NEP9 628 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 PHOSPHO1Q8TCT1 267 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 TMEM255BQ8WV15 326 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 OIT3Q8WWZ8 545 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 SLC35B4Q969S0 331 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 ZNF524Q96C55 264 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 ZNF559Q9BR84 538 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms