RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 LARP4Q71RC2 724 aaKnown RBP eCLIP11.89□□□□□ -0.51
USP38-201ENST00000307017 OR52R1Q8NGF1 315 aa11.89□□□□□ -0.51
USP38-201ENST00000307017 EHFQ9NZC4 300 aa11.89□□□□□ -0.51
USP38-201ENST00000307017 HOXA10P31260 410 aaPredicted RBP11.89□□□□□ -0.51
USP38-201ENST00000307017 POLR2IP36954 125 aaKnown RBP11.89□□□□□ -0.51
USP38-201ENST00000307017 NPBWR1P48145 328 aa11.89□□□□□ -0.51
USP38-201ENST00000307017 HABP2Q14520 560 aaPredicted RBP11.89□□□□□ -0.51
USP38-201ENST00000307017 CGB2Q6NT52 195 aa11.89□□□□□ -0.51
USP38-201ENST00000307017 ABHD12BQ7Z5M8 362 aaPredicted RBP11.89□□□□□ -0.51
USP38-201ENST00000307017 MDGA1Q8NFP4 955 aa11.89□□□□□ -0.51
USP38-201ENST00000307017 DUSP19Q8WTR2 217 aa11.89□□□□□ -0.51
USP38-201ENST00000307017 ZNF514Q96K75 400 aaPredicted RBP11.89□□□□□ -0.51
USP38-201ENST00000307017 HYLS1Q96M11 299 aa11.89□□□□□ -0.51
USP38-201ENST00000307017 PATZ1Q9HBE1 687 aaKnown RBP11.89□□□□□ -0.51
USP38-201ENST00000307017 ZNF355PQ9NSJ1 428 aa11.89□□□□□ -0.51
USP38-201ENST00000307017 PISDQ9UG56 409 aa11.89□□□□□ -0.51
USP38-201ENST00000307017 ZNF736B4DX44 427 aaPredicted RBP11.89□□□□□ -0.51
USP38-201ENST00000307017 SLC31A2O15432 143 aa11.89□□□□□ -0.51
USP38-201ENST00000307017 ARHGEF15O94989 841 aa11.89□□□□□ -0.51
USP38-201ENST00000307017 ZNF43P17038 809 aa11.89□□□□□ -0.51
USP38-201ENST00000307017 GPR143P51810 404 aa11.89□□□□□ -0.51
USP38-201ENST00000307017 HHEXQ03014 270 aa11.89□□□□□ -0.51
USP38-201ENST00000307017 TGFBR3Q03167 851 aa11.89□□□□□ -0.51
USP38-201ENST00000307017 LTB4RQ15722 352 aa11.89□□□□□ -0.51
USP38-201ENST00000307017 TATDN3Q17R31 274 aa11.89□□□□□ -0.51
USP38-201ENST00000307017 UGT3A2Q3SY77 523 aa11.89□□□□□ -0.51
USP38-201ENST00000307017 OGFOD3Q6PK18 319 aa11.89□□□□□ -0.51
USP38-201ENST00000307017 SPARTQ8N0X7 666 aa11.89□□□□□ -0.51
USP38-201ENST00000307017 DDIT4LQ96D03 193 aa11.89□□□□□ -0.51
USP38-201ENST00000307017 C11orf84Q9BUA3 381 aaPredicted RBP11.89□□□□□ -0.51
USP38-201ENST00000307017 CDCP1Q9H5V8 836 aa11.89□□□□□ -0.51
USP38-201ENST00000307017 TMEM100Q9NV29 134 aa11.89□□□□□ -0.51
USP38-201ENST00000307017 APOBEC3BQ9UH17 382 aaKnown RBP11.89□□□□□ -0.51
USP38-201ENST00000307017 ASB3Q9Y575 518 aa11.89□□□□□ -0.51
USP38-201ENST00000307017 TRBV4-1A0A0J9YWV2 114 aa11.89□□□□□ -0.51
USP38-201ENST00000307017 IFNA10P01566 189 aa11.89□□□□□ -0.51
USP38-201ENST00000307017 UBE2NP61088 152 aaKnown RBP11.89□□□□□ -0.51
USP38-201ENST00000307017 OR7E24Q6IFN5 339 aa11.89□□□□□ -0.51
USP38-201ENST00000307017 IMP4Q96G21 291 aaKnown RBP11.89□□□□□ -0.51
USP38-201ENST00000307017 ZNF696Q9H7X3 374 aa11.89□□□□□ -0.51
USP38-201ENST00000307017 VAPAQ9P0L0 249 aa11.89□□□□□ -0.51
USP38-201ENST00000307017 FAM221BA6H8Z2 402 aa11.89□□□□□ -0.51
USP38-201ENST00000307017 DVL1O14640 695 aa11.89□□□□□ -0.51
USP38-201ENST00000307017 ERP29P30040 261 aaKnown RBP11.89□□□□□ -0.51
USP38-201ENST00000307017 DVL1P1P54792 670 aaPredicted RBP11.89□□□□□ -0.51
USP38-201ENST00000307017 NEIL2Q969S2 332 aa11.89□□□□□ -0.51
USP38-201ENST00000307017 KCNIP1Q9NZI2 227 aa11.89□□□□□ -0.51
USP38-201ENST00000307017 FAM208AQ9UK61 1670 aaKnown RBP11.89□□□□□ -0.51
USP38-201ENST00000307017 HEPACAM2A8MVW5 462 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 CPMP14384 443 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 RPS21P63220 83 aaKnown RBP11.88□□□□□ -0.51
USP38-201ENST00000307017 ZNF252P-AS1Q0IIN9 211 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 UBXN10Q96LJ8 280 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 LTB4R2Q9NPC1 389 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 QPCTLQ9NXS2 382 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 ACAD8Q9UKU7 415 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 GRIA2P42262 883 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 LRP11Q86VZ4 500 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 FAM213BQ8TBF2 198 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 EGLN2Q96KS0 407 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 SAP130Q9H0E3 1048 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 GNB4Q9HAV0 340 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 KCNJ16Q9NPI9 418 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 PURGQ9UJV8 347 aaKnown RBP11.88□□□□□ -0.51
USP38-201ENST00000307017 C17orf105B2RV13 164 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 KLF11O14901 512 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 LCMT2O60294 686 aaKnown RBP11.88□□□□□ -0.51
USP38-201ENST00000307017 ONECUT3O60422 494 aaPredicted RBP11.88□□□□□ -0.51
USP38-201ENST00000307017 SEMG1P04279 462 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 CDK4P11802 303 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 PRSS3P35030 304 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 SELENOVP59797 346 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 MELKQ14680 651 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 GPR19Q15760 415 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 ENTPD8Q5MY95 495 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 ISCA2Q86U28 154 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 BIRC8Q96P09 236 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 PCYT2Q99447 389 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 POTEKPQ9BYX7 375 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 SLC23A2Q9UGH3 650 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 ENPP5Q9UJA9 477 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 PRKNO60260 465 aaPredicted RBP11.88□□□□□ -0.51
USP38-201ENST00000307017 CSF2RAP15509 400 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 CASP6P55212 293 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 PGM2L1Q6PCE3 622 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 SGPP2Q8IWX5 399 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 ZNF419Q96HQ0 510 aaPredicted RBP11.88□□□□□ -0.51
USP38-201ENST00000307017 NPIPB15A6NHN6 443 aaPredicted RBP11.88□□□□□ -0.51
USP38-201ENST00000307017 SLC22A31A6NKX4 558 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 OR6C76A6NM76 312 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 IQCF3P0C7M6 154 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 ZNF169Q14929 603 aaPredicted RBP11.88□□□□□ -0.51
USP38-201ENST00000307017 PLEKHN1Q494U1 663 aaPredicted RBP11.88□□□□□ -0.51
USP38-201ENST00000307017 STEAP4Q687X5 459 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 HAVCR2Q8TDQ0 301 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 ALOXE3Q9BYJ1 711 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 ZDHHC7Q9NXF8 308 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 RIMS3Q9UJD0 308 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 DENRO43583 198 aaKnown RBP11.88□□□□□ -0.51
USP38-201ENST00000307017 TIMP2P16035 220 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms