RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 NR0B2Q15466 257 aa17.91■□□□□ 0.46
HOXC4-201ENST00000303406 TSTQ16762 297 aaKnown RBP17.91■□□□□ 0.46
HOXC4-201ENST00000303406 CLEC12AQ5QGZ9 265 aa17.91■□□□□ 0.46
HOXC4-201ENST00000303406 SLC30A6Q6NXT4 461 aa17.91■□□□□ 0.46
HOXC4-201ENST00000303406 ULK3Q6PHR2 472 aa17.91■□□□□ 0.46
HOXC4-201ENST00000303406 BMP8AQ7Z5Y6 402 aa17.91■□□□□ 0.46
HOXC4-201ENST00000303406 TMEM151BQ8IW70 566 aa17.91■□□□□ 0.46
HOXC4-201ENST00000303406 PFN4Q8NHR9 129 aa17.91■□□□□ 0.46
HOXC4-201ENST00000303406 FANK1Q8TC84 345 aa17.91■□□□□ 0.46
HOXC4-201ENST00000303406 BPIFA2Q96DR5 249 aa17.91■□□□□ 0.46
HOXC4-201ENST00000303406 RNFT2Q96EX2 444 aa17.91■□□□□ 0.46
HOXC4-201ENST00000303406 SAMD8Q96LT4 415 aa17.91■□□□□ 0.46
HOXC4-201ENST00000303406 JAM3Q9BX67 310 aa17.91■□□□□ 0.46
HOXC4-201ENST00000303406 DPH1Q9BZG8 443 aa17.91■□□□□ 0.46
HOXC4-201ENST00000303406 HMG20AQ9NP66 347 aa17.91■□□□□ 0.46
HOXC4-201ENST00000303406 MRTO4Q9UKD2 239 aaKnown RBP17.91■□□□□ 0.46
HOXC4-201ENST00000303406 SRPK3Q9UPE1 567 aa17.91■□□□□ 0.46
HOXC4-201ENST00000303406 FRG2CA6NGY1 282 aa17.9■□□□□ 0.46
HOXC4-201ENST00000303406 CLDN25C9JDP6 229 aa17.9■□□□□ 0.46
HOXC4-201ENST00000303406 FOXD2O60548 495 aaPredicted RBP17.9■□□□□ 0.46
HOXC4-201ENST00000303406 HCN1O60741 890 aa17.9■□□□□ 0.46
HOXC4-201ENST00000303406 IL33O95760 270 aa17.9■□□□□ 0.46
HOXC4-201ENST00000303406 HSMCR30P0CW71 290 aa17.9■□□□□ 0.46
HOXC4-201ENST00000303406 MYL12AP19105 171 aa17.9■□□□□ 0.46
HOXC4-201ENST00000303406 TBXA2RP21731 343 aa17.9■□□□□ 0.46
HOXC4-201ENST00000303406 ALAS2P22557 587 aa17.9■□□□□ 0.46
HOXC4-201ENST00000303406 HTR1FP30939 366 aa17.9■□□□□ 0.46
HOXC4-201ENST00000303406 TMED1Q13445 227 aa17.9■□□□□ 0.46
HOXC4-201ENST00000303406 SSX1Q16384 188 aa17.9■□□□□ 0.46
HOXC4-201ENST00000303406 KLHL26Q53HC5 615 aa17.9■□□□□ 0.46
HOXC4-201ENST00000303406 ARMC4Q5T2S8 1044 aa17.9■□□□□ 0.46
HOXC4-201ENST00000303406 GID4Q8IVV7 300 aa17.9■□□□□ 0.46
HOXC4-201ENST00000303406 LNX2Q8N448 690 aa17.9■□□□□ 0.46
HOXC4-201ENST00000303406 ZNF614Q8N883 585 aa17.9■□□□□ 0.46
HOXC4-201ENST00000303406 FAM71CQ8NEG0 241 aa17.9■□□□□ 0.46
HOXC4-201ENST00000303406 OR6Q1Q8NGQ2 317 aa17.9■□□□□ 0.46
HOXC4-201ENST00000303406 OR4C6Q8NH72 309 aa17.9■□□□□ 0.46
HOXC4-201ENST00000303406 OR14A16Q8NHC5 309 aa17.9■□□□□ 0.46
HOXC4-201ENST00000303406 SIAEQ9HAT2 523 aa17.9■□□□□ 0.46
HOXC4-201ENST00000303406 MKKSQ9NPJ1 570 aaPredicted RBP17.9■□□□□ 0.46
HOXC4-201ENST00000303406 AKIP1Q9NQ31 210 aa17.9■□□□□ 0.46
HOXC4-201ENST00000303406 CHCHD3Q9NX63 227 aaKnown RBP17.9■□□□□ 0.46
HOXC4-201ENST00000303406 SEC14L4Q9UDX3 406 aa17.9■□□□□ 0.46
HOXC4-201ENST00000303406 CLEC2DQ9UHP7 191 aa17.9■□□□□ 0.46
HOXC4-201ENST00000303406 PILRBQ9UKJ0 227 aa17.9■□□□□ 0.46
HOXC4-201ENST00000303406 EXOGQ9Y2C4 368 aaKnown RBP17.9■□□□□ 0.46
HOXC4-201ENST00000303406 OR2W5A6NFC9 320 aa17.89■□□□□ 0.45
HOXC4-201ENST00000303406 BHLHE40O14503 412 aa17.89■□□□□ 0.45
HOXC4-201ENST00000303406 ZGLP1P0C6A0 271 aa17.89■□□□□ 0.45
HOXC4-201ENST00000303406 GPR143P51810 404 aa17.89■□□□□ 0.45
HOXC4-201ENST00000303406 CDH11P55287 796 aa17.89■□□□□ 0.45
HOXC4-201ENST00000303406 RAB15P59190 212 aa17.89■□□□□ 0.45
HOXC4-201ENST00000303406 PEAR1Q5VY43 1037 aaPredicted RBP17.89■□□□□ 0.45
HOXC4-201ENST00000303406 AMER2Q8N7J2 671 aa17.89■□□□□ 0.45
HOXC4-201ENST00000303406 FAM181AQ8N9Y4 354 aa17.89■□□□□ 0.45
HOXC4-201ENST00000303406 ZNF527Q8NB42 609 aa17.89■□□□□ 0.45
HOXC4-201ENST00000303406 OR9Q1Q8NGQ5 310 aa17.89■□□□□ 0.45
HOXC4-201ENST00000303406 DNAJA4Q8WW22 397 aaPredicted RBP17.89■□□□□ 0.45
HOXC4-201ENST00000303406 DPYSL5Q9BPU6 564 aa17.89■□□□□ 0.45
HOXC4-201ENST00000303406 YIPF2Q9BWQ6 316 aa17.89■□□□□ 0.45
HOXC4-201ENST00000303406 NXF2Q9GZY0 626 aaKnown RBP17.89■□□□□ 0.45
HOXC4-201ENST00000303406 OR51E2Q9H255 320 aa17.89■□□□□ 0.45
HOXC4-201ENST00000303406 MMP27Q9H306 513 aa17.89■□□□□ 0.45
HOXC4-201ENST00000303406 EXOSC3Q9NQT5 275 aaKnown RBP17.89■□□□□ 0.45
HOXC4-201ENST00000303406 PRDM6Q9NQX0 595 aa17.89■□□□□ 0.45
HOXC4-201ENST00000303406 PNO1Q9NRX1 252 aaKnown RBP17.89■□□□□ 0.45
HOXC4-201ENST00000303406 C20orf141Q9NUB4 165 aa17.89■□□□□ 0.45
HOXC4-201ENST00000303406 DHCR7Q9UBM7 475 aaKnown RBP17.89■□□□□ 0.45
HOXC4-201ENST00000303406 SIGLEC7Q9Y286 467 aa17.89■□□□□ 0.45
HOXC4-201ENST00000303406 PMF1-BGLAPU3KQ54 211 aa17.89■□□□□ 0.45
HOXC4-201ENST00000303406 KNL1Q8NG31 2342 aa17.89■□□□□ 0.45
HOXC4-201ENST00000303406 GON4LQ3T8J9 2241 aa17.89■□□□□ 0.45
HOXC4-201ENST00000303406 METTL15A6NJ78 407 aa17.88■□□□□ 0.45
HOXC4-201ENST00000303406 PTP4A3O75365 173 aa17.88■□□□□ 0.45
HOXC4-201ENST00000303406 DDAH2O95865 285 aa17.88■□□□□ 0.45
HOXC4-201ENST00000303406 CSTAP01040 98 aa17.88■□□□□ 0.45
HOXC4-201ENST00000303406 IGF2P01344 180 aa17.88■□□□□ 0.45
HOXC4-201ENST00000303406 OPRL1P41146 370 aa17.88■□□□□ 0.45
HOXC4-201ENST00000303406 FXYD6P3P58550 94 aa17.88■□□□□ 0.45
HOXC4-201ENST00000303406 PSPHP78330 225 aa17.88■□□□□ 0.45
HOXC4-201ENST00000303406 ACY1Q03154 408 aa17.88■□□□□ 0.45
HOXC4-201ENST00000303406 ALG10BQ5I7T1 473 aa17.88■□□□□ 0.45
HOXC4-201ENST00000303406 SNAP47Q5SQN1 464 aa17.88■□□□□ 0.45
HOXC4-201ENST00000303406 FNDC7Q5VTL7 733 aa17.88■□□□□ 0.45
HOXC4-201ENST00000303406 SMARCD3Q6STE5 483 aa17.88■□□□□ 0.45
HOXC4-201ENST00000303406 DEFB123Q8N688 67 aa17.88■□□□□ 0.45
HOXC4-201ENST00000303406 SLC15A4Q8N697 577 aa17.88■□□□□ 0.45
HOXC4-201ENST00000303406 PLPP5Q8NEB5 264 aa17.88■□□□□ 0.45
HOXC4-201ENST00000303406 SAP25Q8TEE9 199 aa17.88■□□□□ 0.45
HOXC4-201ENST00000303406 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.88■□□□□ 0.45
HOXC4-201ENST00000303406 LCORQ96JN0 433 aaPredicted RBP17.88■□□□□ 0.45
HOXC4-201ENST00000303406 MEPEQ9NQ76 525 aaPredicted RBP17.88■□□□□ 0.45
HOXC4-201ENST00000303406 UBQLN4Q9NRR5 601 aa17.88■□□□□ 0.45
HOXC4-201ENST00000303406 FGF21Q9NSA1 209 aa17.88■□□□□ 0.45
HOXC4-201ENST00000303406 NDUFB11Q9NX14 153 aa17.88■□□□□ 0.45
HOXC4-201ENST00000303406 RPS6KB2Q9UBS0 482 aa17.88■□□□□ 0.45
HOXC4-201ENST00000303406 MUTYHQ9UIF7 546 aa17.88■□□□□ 0.45
HOXC4-201ENST00000303406 ICAM5Q9UMF0 924 aa17.88■□□□□ 0.45
HOXC4-201ENST00000303406 GPR52Q9Y2T5 361 aa17.88■□□□□ 0.45
HOXC4-201ENST00000303406 HBQ1P09105 142 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms