RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 SMN1Q16637 294 aaKnown RBP11.06□□□□□ -0.64
TPM3-202ENST00000302206 KLHL26Q53HC5 615 aa11.06□□□□□ -0.64
TPM3-202ENST00000302206 MEDAGQ5VYS4 303 aa11.06□□□□□ -0.64
TPM3-202ENST00000302206 TMEM236Q5W0B7 351 aa11.06□□□□□ -0.64
TPM3-202ENST00000302206 PWWP2BQ6NUJ5 590 aa11.06□□□□□ -0.64
TPM3-202ENST00000302206 PPP1R3BQ86XI6 285 aa11.06□□□□□ -0.64
TPM3-202ENST00000302206 KIF18BQ86Y91 864 aa11.06□□□□□ -0.64
TPM3-202ENST00000302206 CLVS1Q8IUQ0 354 aaPredicted RBP11.06□□□□□ -0.64
TPM3-202ENST00000302206 NLGN4XQ8N0W4 816 aa11.06□□□□□ -0.64
TPM3-202ENST00000302206 FAM26EQ8N5C1 309 aa11.06□□□□□ -0.64
TPM3-202ENST00000302206 POGLUT1Q8NBL1 392 aa11.06□□□□□ -0.64
TPM3-202ENST00000302206 FAM71CQ8NEG0 241 aa11.06□□□□□ -0.64
TPM3-202ENST00000302206 OR1N1Q8NGS0 311 aa11.06□□□□□ -0.64
TPM3-202ENST00000302206 TEX47Q8TBZ9 253 aa11.06□□□□□ -0.64
TPM3-202ENST00000302206 STT3BQ8TCJ2 826 aa11.06□□□□□ -0.64
TPM3-202ENST00000302206 FAR1Q8WVX9 515 aa11.06□□□□□ -0.64
TPM3-202ENST00000302206 FCGR1BQ92637 280 aa11.06□□□□□ -0.64
TPM3-202ENST00000302206 HSPBAP1Q96EW2 488 aa11.06□□□□□ -0.64
TPM3-202ENST00000302206 BCL7BQ9BQE9 202 aa11.06□□□□□ -0.64
TPM3-202ENST00000302206 NUDT9Q9BW91 350 aa11.06□□□□□ -0.64
TPM3-202ENST00000302206 GTPBP2Q9BX10 602 aaKnown RBP11.06□□□□□ -0.64
TPM3-202ENST00000302206 PRRG3Q9BZD7 231 aa11.06□□□□□ -0.64
TPM3-202ENST00000302206 OR8D2Q9GZM6 311 aa11.06□□□□□ -0.64
TPM3-202ENST00000302206 EXOSC3Q9NQT5 275 aaKnown RBP11.06□□□□□ -0.64
TPM3-202ENST00000302206 UBQLN4Q9NRR5 601 aa11.06□□□□□ -0.64
TPM3-202ENST00000302206 COPS7AQ9UBW8 275 aa11.06□□□□□ -0.64
TPM3-202ENST00000302206 AASSQ9UDR5 926 aa11.06□□□□□ -0.64
TPM3-202ENST00000302206 PPIEQ9UNP9 301 aaKnown RBP11.06□□□□□ -0.64
TPM3-202ENST00000302206 LHX6Q9UPM6 363 aa11.06□□□□□ -0.64
TPM3-202ENST00000302206 RP1P56715 2156 aa11.06□□□□□ -0.64
TPM3-202ENST00000302206 UNC13CQ8NB66 2214 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 C2orf92A0A1B0GVN3 265 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 HTR3EA5X5Y0 456 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 TRIM64BA6NI03 449 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 A8MUA0 341 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 ZNF99A8MXY4 864 aaPredicted RBP11.05□□□□□ -0.64
TPM3-202ENST00000302206 FLRT2O43155 660 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 SOX14O95416 240 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 LDOC1O95751 146 aaPredicted RBP11.05□□□□□ -0.64
TPM3-202ENST00000302206 MT-ND2P03891 347 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 NGFRP08138 427 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 ENDOUP21128 410 aaKnown RBP11.05□□□□□ -0.64
TPM3-202ENST00000302206 TBXA2RP21731 343 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 ACVR2AP27037 513 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 CSTF2P33240 577 aaKnown RBP eCLIP11.05□□□□□ -0.64
TPM3-202ENST00000302206 SLC15A1P46059 708 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 CTBP2P56545 445 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 EFNB1P98172 346 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 EMX1Q04741 257 aaPredicted RBP11.05□□□□□ -0.64
TPM3-202ENST00000302206 FOXC1Q12948 553 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 FOXD4Q12950 439 aaPredicted RBP11.05□□□□□ -0.64
TPM3-202ENST00000302206 GINS1Q14691 196 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 EBPQ15125 230 aaKnown RBP11.05□□□□□ -0.64
TPM3-202ENST00000302206 PLA2G2CQ5R387 149 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 PHF19Q5T6S3 580 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 FNDC7Q5VTL7 733 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 HLA-DQA1Q5Y7H0 255 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 RPL13AP3Q6NVV1 102 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 SLC27A4Q6P1M0 643 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 TMPRSS11FQ6ZWK6 438 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 SLC29A4Q7RTT9 530 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 NRMQ8IXM6 262 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 SLC43A2Q8N370 569 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 ZNF321PQ8N8H1 164 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 ZNF441Q8N8Z8 693 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 AGBL5Q8NDL9 886 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 C9orf43Q8TAL5 461 aaPredicted RBP11.05□□□□□ -0.64
TPM3-202ENST00000302206 TMEM255BQ8WV15 326 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 TMEM239Q8WW34 195 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 RORBQ92753 470 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 GGHQ92820 318 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 ISOC1Q96CN7 298 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 CLIP3Q96DZ5 547 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 FAM46AQ96IP4 442 aaKnown RBP11.05□□□□□ -0.64
TPM3-202ENST00000302206 COPS4Q9BT78 406 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 ZNF426Q9BUY5 554 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 TEX12Q9BXU0 123 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 SEMA4CQ9C0C4 833 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 CCDC90BQ9GZT6 254 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 LHPPQ9H008 270 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 NXF5Q9H1B4 397 aaKnown RBP11.05□□□□□ -0.64
TPM3-202ENST00000302206 SYNDIG1Q9H7V2 258 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 MED17Q9NVC6 651 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 IL20Q9NYY1 176 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 CTSFQ9UBX1 484 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 CABIN1Q9Y6J0 2220 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 SPTBP11277 2137 aa11.05□□□□□ -0.64
TPM3-202ENST00000302206 ASXL3Q9C0F0 2248 aa11.04□□□□□ -0.64
TPM3-202ENST00000302206 A0A1B0GWA3 101 aa11.04□□□□□ -0.64
TPM3-202ENST00000302206 A0A1W2PQD3 144 aa11.04□□□□□ -0.64
TPM3-202ENST00000302206 NOL3O60936 208 aaKnown RBP11.04□□□□□ -0.64
TPM3-202ENST00000302206 BCAS1O75363 584 aaPredicted RBP11.04□□□□□ -0.64
TPM3-202ENST00000302206 TRMUO75648 421 aaKnown RBP11.04□□□□□ -0.64
TPM3-202ENST00000302206 TIAF1O95411 115 aa11.04□□□□□ -0.64
TPM3-202ENST00000302206 CSTAP01040 98 aa11.04□□□□□ -0.64
TPM3-202ENST00000302206 HEXBP07686 556 aa11.04□□□□□ -0.64
TPM3-202ENST00000302206 IGFBP1P08833 259 aaPredicted RBP11.04□□□□□ -0.64
TPM3-202ENST00000302206 RFX3P48380 749 aa11.04□□□□□ -0.64
TPM3-202ENST00000302206 MASP1P48740 699 aa11.04□□□□□ -0.64
TPM3-202ENST00000302206 PCYT1AP49585 367 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms