RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 COPS7AQ9UBW8 275 aa20.5■□□□□ 0.87
SMAD1-201ENST00000302085 COL5A1P20908 1838 aaPredicted RBP20.49■□□□□ 0.87
SMAD1-201ENST00000302085 EFCAB10A6NFE3 127 aa20.49■□□□□ 0.87
SMAD1-201ENST00000302085 VSTM2BA6NLU5 285 aa20.49■□□□□ 0.87
SMAD1-201ENST00000302085 CNOT3O75175 753 aaKnown RBP20.49■□□□□ 0.87
SMAD1-201ENST00000302085 ATE1O95260 518 aa20.49■□□□□ 0.87
SMAD1-201ENST00000302085 ADRA2AP08913 450 aa20.49■□□□□ 0.87
SMAD1-201ENST00000302085 ZNF883P0CG24 379 aa20.49■□□□□ 0.87
SMAD1-201ENST00000302085 IFI30P13284 250 aa20.49■□□□□ 0.87
SMAD1-201ENST00000302085 NR0B1P51843 470 aaKnown RBP20.49■□□□□ 0.87
SMAD1-201ENST00000302085 TRA2AQ13595 282 aaKnown RBP eCLIP20.49■□□□□ 0.87
SMAD1-201ENST00000302085 IL11RAQ14626 422 aa20.49■□□□□ 0.87
SMAD1-201ENST00000302085 CLEC12AQ5QGZ9 265 aa20.49■□□□□ 0.87
SMAD1-201ENST00000302085 SLC25A30Q5SVS4 291 aa20.49■□□□□ 0.87
SMAD1-201ENST00000302085 HLA-DQA1Q5Y7H0 255 aa20.49■□□□□ 0.87
SMAD1-201ENST00000302085 DESI1Q6ICB0 168 aa20.49■□□□□ 0.87
SMAD1-201ENST00000302085 APOOLQ6UXV4 268 aa20.49■□□□□ 0.87
SMAD1-201ENST00000302085 ZNF620Q6ZNG0 422 aa20.49■□□□□ 0.87
SMAD1-201ENST00000302085 BPHLQ86WA6 291 aaPredicted RBP20.49■□□□□ 0.87
SMAD1-201ENST00000302085 ERI1Q8IV48 349 aaKnown RBP20.49■□□□□ 0.87
SMAD1-201ENST00000302085 STX19Q8N4C7 294 aa20.49■□□□□ 0.87
SMAD1-201ENST00000302085 BMPERQ8N8U9 685 aa20.49■□□□□ 0.87
SMAD1-201ENST00000302085 LOXL4Q96JB6 756 aa20.49■□□□□ 0.87
SMAD1-201ENST00000302085 ADOQ96SZ5 270 aa20.49■□□□□ 0.87
SMAD1-201ENST00000302085 DPH1Q9BZG8 443 aa20.49■□□□□ 0.87
SMAD1-201ENST00000302085 WARS2Q9UGM6 360 aaKnown RBP20.49■□□□□ 0.87
SMAD1-201ENST00000302085 MUC3AQ02505 3323 aa20.49■□□□□ 0.87
SMAD1-201ENST00000302085 UNC119BA6NIH7 251 aa20.48■□□□□ 0.87
SMAD1-201ENST00000302085 KPNA4O00629 521 aaPredicted RBP20.48■□□□□ 0.87
SMAD1-201ENST00000302085 TO15178 435 aa20.48■□□□□ 0.87
SMAD1-201ENST00000302085 LCKP06239 509 aa20.48■□□□□ 0.87
SMAD1-201ENST00000302085 FUT1P19526 365 aa20.48■□□□□ 0.87
SMAD1-201ENST00000302085 ADH7P40394 386 aa20.48■□□□□ 0.87
SMAD1-201ENST00000302085 PEX19P40855 299 aa20.48■□□□□ 0.87
SMAD1-201ENST00000302085 GRK6P43250 576 aa20.48■□□□□ 0.87
SMAD1-201ENST00000302085 CD226Q15762 336 aa20.48■□□□□ 0.87
SMAD1-201ENST00000302085 SNAPC1Q16533 368 aa20.48■□□□□ 0.87
SMAD1-201ENST00000302085 KIRREL2Q6UWL6 708 aa20.48■□□□□ 0.87
SMAD1-201ENST00000302085 LINC00114Q6XXX2 140 aa20.48■□□□□ 0.87
SMAD1-201ENST00000302085 CADM2Q8N3J6 435 aa20.48■□□□□ 0.87
SMAD1-201ENST00000302085 ZNF441Q8N8Z8 693 aa20.48■□□□□ 0.87
SMAD1-201ENST00000302085 GATSQ8NAP1 163 aa20.48■□□□□ 0.87
SMAD1-201ENST00000302085 OR4Q3Q8NH05 313 aa20.48■□□□□ 0.87
SMAD1-201ENST00000302085 HS6ST2Q96MM7 605 aa20.48■□□□□ 0.87
SMAD1-201ENST00000302085 FUNDC2Q9BWH2 189 aa20.48■□□□□ 0.87
SMAD1-201ENST00000302085 MEPEQ9NQ76 525 aaPredicted RBP20.48■□□□□ 0.87
SMAD1-201ENST00000302085 CNOT2Q9NZN8 540 aaKnown RBP20.48■□□□□ 0.87
SMAD1-201ENST00000302085 MRTO4Q9UKD2 239 aaKnown RBP20.48■□□□□ 0.87
SMAD1-201ENST00000302085 SLC35A3Q9Y2D2 325 aa20.48■□□□□ 0.87
SMAD1-201ENST00000302085 SYNDIG1LA6NDD5 238 aa20.48■□□□□ 0.87
SMAD1-201ENST00000302085 OIP5O43482 229 aa20.48■□□□□ 0.87
SMAD1-201ENST00000302085 ALOX12BO75342 701 aa20.48■□□□□ 0.87
SMAD1-201ENST00000302085 REM1O75628 298 aa20.48■□□□□ 0.87
SMAD1-201ENST00000302085 RFPL3O75679 317 aa20.48■□□□□ 0.87
SMAD1-201ENST00000302085 IRF3Q14653 427 aa20.48■□□□□ 0.87
SMAD1-201ENST00000302085 UBE2UQ5VVX9 321 aa20.48■□□□□ 0.87
SMAD1-201ENST00000302085 BMP8AQ7Z5Y6 402 aa20.48■□□□□ 0.87
SMAD1-201ENST00000302085 OIT3Q8WWZ8 545 aa20.48■□□□□ 0.87
SMAD1-201ENST00000302085 ZNF426Q9BUY5 554 aa20.48■□□□□ 0.87
SMAD1-201ENST00000302085 AKIRIN1Q9H9L7 192 aaPredicted RBP20.48■□□□□ 0.87
SMAD1-201ENST00000302085 TBC1D23Q9NUY8 699 aa20.48■□□□□ 0.87
SMAD1-201ENST00000302085 MED31Q9Y3C7 131 aa20.48■□□□□ 0.87
SMAD1-201ENST00000302085 PCDHGB2Q9Y5G2 931 aa20.48■□□□□ 0.87
SMAD1-201ENST00000302085 CDH10Q9Y6N8 788 aa20.48■□□□□ 0.87
SMAD1-201ENST00000302085 OR6C76A6NM76 312 aa20.47■□□□□ 0.87
SMAD1-201ENST00000302085 TBXA2RP21731 343 aa20.47■□□□□ 0.87
SMAD1-201ENST00000302085 ACP1P24666 158 aa20.47■□□□□ 0.87
SMAD1-201ENST00000302085 CTBP2P56545 445 aa20.47■□□□□ 0.87
SMAD1-201ENST00000302085 ALG10BQ5I7T1 473 aa20.47■□□□□ 0.87
SMAD1-201ENST00000302085 TMPRSS11FQ6ZWK6 438 aa20.47■□□□□ 0.87
SMAD1-201ENST00000302085 SLC29A4Q7RTT9 530 aa20.47■□□□□ 0.87
SMAD1-201ENST00000302085 CLDN22Q8N7P3 220 aa20.47■□□□□ 0.87
SMAD1-201ENST00000302085 ZNF527Q8NB42 609 aa20.47■□□□□ 0.87
SMAD1-201ENST00000302085 AGBL5Q8NDL9 886 aa20.47■□□□□ 0.87
SMAD1-201ENST00000302085 FAM71CQ8NEG0 241 aa20.47■□□□□ 0.87
SMAD1-201ENST00000302085 NFAM1Q8NET5 270 aaPredicted RBP20.47■□□□□ 0.87
SMAD1-201ENST00000302085 PCDHGA5Q9Y5G8 931 aa20.47■□□□□ 0.87
SMAD1-201ENST00000302085 TRIM64BA6NI03 449 aa20.46■□□□□ 0.87
SMAD1-201ENST00000302085 ENO4A6NNW6 628 aa20.46■□□□□ 0.87
SMAD1-201ENST00000302085 MEN1O00255 615 aa20.46■□□□□ 0.87
SMAD1-201ENST00000302085 PIPP12273 146 aaPredicted RBP20.46■□□□□ 0.87
SMAD1-201ENST00000302085 CCL4P13236 92 aa20.46■□□□□ 0.87
SMAD1-201ENST00000302085 EMP2P54851 167 aa20.46■□□□□ 0.87
SMAD1-201ENST00000302085 SYT14P1Q58G82 188 aa20.46■□□□□ 0.87
SMAD1-201ENST00000302085 PLA2G2CQ5R387 149 aa20.46■□□□□ 0.87
SMAD1-201ENST00000302085 SLC30A6Q6NXT4 461 aa20.46■□□□□ 0.87
SMAD1-201ENST00000302085 ULK3Q6PHR2 472 aa20.46■□□□□ 0.87
SMAD1-201ENST00000302085 WDR36Q8NI36 951 aaKnown RBP20.46■□□□□ 0.87
SMAD1-201ENST00000302085 RHBDD1Q8TEB9 315 aa20.46■□□□□ 0.87
SMAD1-201ENST00000302085 BPIFA2Q96DR5 249 aa20.46■□□□□ 0.87
SMAD1-201ENST00000302085 YIPF6Q96EC8 236 aa20.46■□□□□ 0.87
SMAD1-201ENST00000302085 SAMD8Q96LT4 415 aa20.46■□□□□ 0.87
SMAD1-201ENST00000302085 SCDO00767 359 aa20.46■□□□□ 0.87
SMAD1-201ENST00000302085 TSPAN2O60636 221 aa20.46■□□□□ 0.87
SMAD1-201ENST00000302085 NGFRP08138 427 aa20.46■□□□□ 0.87
SMAD1-201ENST00000302085 HPGDP15428 266 aa20.46■□□□□ 0.87
SMAD1-201ENST00000302085 ZNF28P17035 718 aa20.46■□□□□ 0.87
SMAD1-201ENST00000302085 PSMB9P28065 219 aa20.46■□□□□ 0.87
SMAD1-201ENST00000302085 FXYD6P3P58550 94 aa20.46■□□□□ 0.87
SMAD1-201ENST00000302085 TBCEQ15813 527 aaPredicted RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms