RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 C5orf51A6NDU8 294 aa12.43□□□□□ -0.42
CASC4-201ENST00000299957 SLC9B1P1A6NJY1 282 aa12.43□□□□□ -0.42
CASC4-201ENST00000299957 FOXE1O00358 373 aaPredicted RBP12.43□□□□□ -0.42
CASC4-201ENST00000299957 SCO2O43819 266 aa12.43□□□□□ -0.42
CASC4-201ENST00000299957 AKT2P31751 481 aa12.43□□□□□ -0.42
CASC4-201ENST00000299957 KIR2DL3P43628 341 aa12.43□□□□□ -0.42
CASC4-201ENST00000299957 USP53Q70EK8 1073 aa12.43□□□□□ -0.42
CASC4-201ENST00000299957 ABHD13Q7L211 337 aa12.43□□□□□ -0.42
CASC4-201ENST00000299957 OR2L5Q8NG80 312 aa12.43□□□□□ -0.42
CASC4-201ENST00000299957 MTHFD2LQ9H903 347 aaPredicted RBP12.43□□□□□ -0.42
CASC4-201ENST00000299957 RBFOX1Q9NWB1 397 aaKnown RBP12.43□□□□□ -0.42
CASC4-201ENST00000299957 TRBV5-3A0A0A0MS03 114 aa12.43□□□□□ -0.42
CASC4-201ENST00000299957 CDC40O60508 579 aaKnown RBP eCLIP12.43□□□□□ -0.42
CASC4-201ENST00000299957 ELK1P19419 428 aa12.43□□□□□ -0.42
CASC4-201ENST00000299957 ATP5A1P25705 553 aaKnown RBP12.43□□□□□ -0.42
CASC4-201ENST00000299957 MAGEB1P43366 347 aa12.43□□□□□ -0.42
CASC4-201ENST00000299957 CEBPGP53567 150 aa12.43□□□□□ -0.42
CASC4-201ENST00000299957 PITPNAQ00169 270 aa12.43□□□□□ -0.42
CASC4-201ENST00000299957 CDK10Q15131 360 aa12.43□□□□□ -0.42
CASC4-201ENST00000299957 ZNF776Q68DI1 518 aaPredicted RBP12.43□□□□□ -0.42
CASC4-201ENST00000299957 ELP2Q6IA86 826 aa12.43□□□□□ -0.42
CASC4-201ENST00000299957 LEG1Q6P5S2 330 aa12.43□□□□□ -0.42
CASC4-201ENST00000299957 FIGLAQ6QHK4 219 aa12.43□□□□□ -0.42
CASC4-201ENST00000299957 MRPL43Q8N983 215 aaKnown RBP12.43□□□□□ -0.42
CASC4-201ENST00000299957 ZNF511Q8NB15 262 aa12.43□□□□□ -0.42
CASC4-201ENST00000299957 CCL4L1Q8NHW4 92 aa12.43□□□□□ -0.42
CASC4-201ENST00000299957 THAP4Q8WY91 577 aa12.43□□□□□ -0.42
CASC4-201ENST00000299957 TMEM38AQ9H6F2 299 aa12.43□□□□□ -0.42
CASC4-201ENST00000299957 Q9N2J8 555 aa12.43□□□□□ -0.42
CASC4-201ENST00000299957 LYARQ9NX58 379 aaKnown RBP12.43□□□□□ -0.42
CASC4-201ENST00000299957 NOP16Q9Y3C1 178 aaKnown RBP12.43□□□□□ -0.42
CASC4-201ENST00000299957 CACNG2Q9Y698 323 aa12.43□□□□□ -0.42
CASC4-201ENST00000299957 KCNE1BA0A087WTH5 132 aa12.42□□□□□ -0.42
CASC4-201ENST00000299957 SLC22A31A6NKX4 558 aa12.42□□□□□ -0.42
CASC4-201ENST00000299957 ZNF879B4DU55 563 aa12.42□□□□□ -0.42
CASC4-201ENST00000299957 SOX1O00570 391 aaPredicted RBP12.42□□□□□ -0.42
CASC4-201ENST00000299957 ITGA10O75578 1167 aa12.42□□□□□ -0.42
CASC4-201ENST00000299957 SPDEFO95238 335 aa12.42□□□□□ -0.42
CASC4-201ENST00000299957 SIX6O95475 246 aa12.42□□□□□ -0.42
CASC4-201ENST00000299957 KLF8O95600 359 aaPredicted RBP12.42□□□□□ -0.42
CASC4-201ENST00000299957 FGF19O95750 216 aa12.42□□□□□ -0.42
CASC4-201ENST00000299957 CA3P07451 260 aa12.42□□□□□ -0.42
CASC4-201ENST00000299957 ITGB7P26010 798 aa12.42□□□□□ -0.42
CASC4-201ENST00000299957 FAUP35544 74 aaKnown RBP12.42□□□□□ -0.42
CASC4-201ENST00000299957 NUP62P37198 522 aaPredicted RBP12.42□□□□□ -0.42
CASC4-201ENST00000299957 FAPQ12884 760 aa12.42□□□□□ -0.42
CASC4-201ENST00000299957 IRF5Q13568 498 aa12.42□□□□□ -0.42
CASC4-201ENST00000299957 TMEM44Q2T9K0 475 aa12.42□□□□□ -0.42
CASC4-201ENST00000299957 GID4Q8IVV7 300 aa12.42□□□□□ -0.42
CASC4-201ENST00000299957 NATD1Q8N6N6 113 aa12.42□□□□□ -0.42
CASC4-201ENST00000299957 ADAMTS19Q8TE59 1207 aa12.42□□□□□ -0.42
CASC4-201ENST00000299957 COQ10AQ96MF6 247 aa12.42□□□□□ -0.42
CASC4-201ENST00000299957 DGAT2Q96PD7 388 aa12.42□□□□□ -0.42
CASC4-201ENST00000299957 UBQLN3Q9H347 655 aa12.42□□□□□ -0.42
CASC4-201ENST00000299957 AKAP7Q9P0M2 348 aaPredicted RBP12.42□□□□□ -0.42
CASC4-201ENST00000299957 KLHL42Q9P2K6 505 aa12.42□□□□□ -0.42
CASC4-201ENST00000299957 PCDHGB2Q9Y5G2 931 aa12.42□□□□□ -0.42
CASC4-201ENST00000299957 DCDC2BA2VCK2 349 aa12.42□□□□□ -0.42
CASC4-201ENST00000299957 MAKP20794 623 aa12.42□□□□□ -0.42
CASC4-201ENST00000299957 AP3S2P59780 193 aa12.42□□□□□ -0.42
CASC4-201ENST00000299957 UBE2MP61081 183 aaKnown RBP12.42□□□□□ -0.42
CASC4-201ENST00000299957 MAT1AQ00266 395 aaKnown RBP12.42□□□□□ -0.42
CASC4-201ENST00000299957 FCRLAQ7L513 359 aa12.42□□□□□ -0.42
CASC4-201ENST00000299957 PAQR7Q86WK9 346 aa12.42□□□□□ -0.42
CASC4-201ENST00000299957 CSNK1A1LQ8N752 337 aa12.42□□□□□ -0.42
CASC4-201ENST00000299957 IL17RDQ8NFM7 739 aa12.42□□□□□ -0.42
CASC4-201ENST00000299957 HYLS1Q96M11 299 aa12.42□□□□□ -0.42
CASC4-201ENST00000299957 OR2A14Q96R47 310 aa12.42□□□□□ -0.42
CASC4-201ENST00000299957 OR14A2Q96R54 314 aa12.42□□□□□ -0.42
CASC4-201ENST00000299957 WFDC6Q9BQY6 131 aa12.42□□□□□ -0.42
CASC4-201ENST00000299957 C6orf106Q9H6K1 298 aaPredicted RBP12.42□□□□□ -0.42
CASC4-201ENST00000299957 GDI2P50395 445 aaKnown RBP12.42□□□□□ -0.42
CASC4-201ENST00000299957 RUNX3Q13761 415 aa12.42□□□□□ -0.42
CASC4-201ENST00000299957 KLHL26Q53HC5 615 aa12.42□□□□□ -0.42
CASC4-201ENST00000299957 LHX8Q68G74 356 aa12.42□□□□□ -0.42
CASC4-201ENST00000299957 ALKAL2Q6UX46 152 aa12.42□□□□□ -0.42
CASC4-201ENST00000299957 GPR135Q8IZ08 494 aa12.42□□□□□ -0.42
CASC4-201ENST00000299957 OR5K2Q8NHB8 316 aa12.42□□□□□ -0.42
CASC4-201ENST00000299957 TRMT61AQ96FX7 289 aaKnown RBP12.42□□□□□ -0.42
CASC4-201ENST00000299957 PITX2Q99697 317 aa12.42□□□□□ -0.42
CASC4-201ENST00000299957 RAB11FIP5Q9BXF6 653 aa12.42□□□□□ -0.42
CASC4-201ENST00000299957 SIDT1Q9NXL6 827 aaKnown RBP12.42□□□□□ -0.42
CASC4-201ENST00000299957 CKLFQ9UBR5 152 aa12.42□□□□□ -0.42
CASC4-201ENST00000299957 ZNF638Q14966 1978 aaKnown RBP12.42□□□□□ -0.42
CASC4-201ENST00000299957 TRAV18A0A075B6X5 111 aa12.41□□□□□ -0.42
CASC4-201ENST00000299957 MRPS14O60783 128 aaKnown RBP12.41□□□□□ -0.42
CASC4-201ENST00000299957 SDC3O75056 442 aa12.41□□□□□ -0.42
CASC4-201ENST00000299957 FZD7O75084 574 aa12.41□□□□□ -0.42
CASC4-201ENST00000299957 OR8G3PP0DMU2 310 aa12.41□□□□□ -0.42
CASC4-201ENST00000299957 CXCR1P25024 350 aa12.41□□□□□ -0.42
CASC4-201ENST00000299957 VASPP50552 380 aaPredicted RBP12.41□□□□□ -0.42
CASC4-201ENST00000299957 TSPAN31Q12999 210 aa12.41□□□□□ -0.42
CASC4-201ENST00000299957 OR1Q1Q15612 314 aa12.41□□□□□ -0.42
CASC4-201ENST00000299957 SPRED2Q7Z698 418 aa12.41□□□□□ -0.42
CASC4-201ENST00000299957 TMC8Q8IU68 726 aa12.41□□□□□ -0.42
CASC4-201ENST00000299957 TP53I13Q8NBR0 393 aaPredicted RBP12.41□□□□□ -0.42
CASC4-201ENST00000299957 OR5J2Q8NH18 312 aa12.41□□□□□ -0.42
CASC4-201ENST00000299957 RLN3Q8WXF3 142 aa12.41□□□□□ -0.42
CASC4-201ENST00000299957 SMARCD2Q92925 531 aa12.41□□□□□ -0.42
CASC4-201ENST00000299957 SLC25A46Q96AG3 418 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms