RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 MBNL1Q9NR56 388 aaKnown RBP17.34■□□□□ 0.37
PCDH1-201ENST00000287008 FBXL3Q9UKT7 428 aa17.34■□□□□ 0.37
PCDH1-201ENST00000287008 SLC16A7O60669 478 aa17.34■□□□□ 0.37
PCDH1-201ENST00000287008 METRNLQ641Q3 311 aa17.34■□□□□ 0.37
PCDH1-201ENST00000287008 VRK3Q8IV63 474 aa17.34■□□□□ 0.37
PCDH1-201ENST00000287008 SLC35F2Q8IXU6 374 aa17.34■□□□□ 0.37
PCDH1-201ENST00000287008 SPEM1Q8N4L4 309 aa17.34■□□□□ 0.37
PCDH1-201ENST00000287008 MAFAQ8NHW3 353 aaPredicted RBP17.34■□□□□ 0.37
PCDH1-201ENST00000287008 BCL7CQ8WUZ0 217 aaPredicted RBP17.34■□□□□ 0.37
PCDH1-201ENST00000287008 ZNF224Q9NZL3 707 aa17.34■□□□□ 0.37
PCDH1-201ENST00000287008 TESQ9UGI8 421 aaKnown RBP17.34■□□□□ 0.37
PCDH1-201ENST00000287008 ZNF443Q9Y2A4 671 aaPredicted RBP17.34■□□□□ 0.37
PCDH1-201ENST00000287008 TRAV6A0A075B6T7 132 aa17.34■□□□□ 0.37
PCDH1-201ENST00000287008 TMEM202A6NGA9 273 aa17.34■□□□□ 0.37
PCDH1-201ENST00000287008 H7C417 338 aa17.34■□□□□ 0.37
PCDH1-201ENST00000287008 CHRM4P08173 479 aa17.34■□□□□ 0.37
PCDH1-201ENST00000287008 TNFSF4P23510 183 aa17.34■□□□□ 0.37
PCDH1-201ENST00000287008 SNTB2Q13425 540 aaKnown RBP17.34■□□□□ 0.37
PCDH1-201ENST00000287008 UGT8Q16880 541 aa17.34■□□□□ 0.37
PCDH1-201ENST00000287008 LINC00696Q6ZRV3 163 aa17.34■□□□□ 0.37
PCDH1-201ENST00000287008 TRIM46Q7Z4K8 759 aa17.34■□□□□ 0.37
PCDH1-201ENST00000287008 TRAPPC6BQ86SZ2 158 aa17.34■□□□□ 0.37
PCDH1-201ENST00000287008 OR1J4Q8NGS1 313 aa17.34■□□□□ 0.37
PCDH1-201ENST00000287008 DUSP19Q8WTR2 217 aa17.34■□□□□ 0.37
PCDH1-201ENST00000287008 CTRCQ99895 268 aa17.34■□□□□ 0.37
PCDH1-201ENST00000287008 ALG8Q9BVK2 526 aa17.34■□□□□ 0.37
PCDH1-201ENST00000287008 C1QTNF2Q9BXJ5 285 aa17.34■□□□□ 0.37
PCDH1-201ENST00000287008 DNAJB11Q9UBS4 358 aa17.34■□□□□ 0.37
PCDH1-201ENST00000287008 ZNF337Q9Y3M9 751 aa17.34■□□□□ 0.37
PCDH1-201ENST00000287008 POM121BA6NF01 834 aa17.33■□□□□ 0.37
PCDH1-201ENST00000287008 IGHG1P01857 330 aa17.33■□□□□ 0.37
PCDH1-201ENST00000287008 IGFBP6P24592 240 aaPredicted RBP17.33■□□□□ 0.37
PCDH1-201ENST00000287008 MRPL2Q5T653 305 aaKnown RBP17.33■□□□□ 0.37
PCDH1-201ENST00000287008 AWAT2Q6E213 333 aa17.33■□□□□ 0.37
PCDH1-201ENST00000287008 UBTD2Q8WUN7 234 aa17.33■□□□□ 0.37
PCDH1-201ENST00000287008 AIFM2Q9BRQ8 373 aa17.33■□□□□ 0.37
PCDH1-201ENST00000287008 GORASP2Q9H8Y8 452 aa17.33■□□□□ 0.37
PCDH1-201ENST00000287008 TEX10Q9NXF1 929 aaPredicted RBP17.33■□□□□ 0.37
PCDH1-201ENST00000287008 PIGBOS1A0A0B4J2F0 54 aa17.33■□□□□ 0.37
PCDH1-201ENST00000287008 OR1D5P58170 312 aa17.33■□□□□ 0.37
PCDH1-201ENST00000287008 NGBQ9NPG2 151 aa17.33■□□□□ 0.37
PCDH1-201ENST00000287008 OR5K3A6NET4 321 aa17.33■□□□□ 0.36
PCDH1-201ENST00000287008 AP1G1O43747 822 aa17.33■□□□□ 0.36
PCDH1-201ENST00000287008 HTR3BO95264 441 aa17.33■□□□□ 0.36
PCDH1-201ENST00000287008 MAGEA12P43365 314 aa17.33■□□□□ 0.36
PCDH1-201ENST00000287008 CSNK1G2P78368 415 aa17.33■□□□□ 0.36
PCDH1-201ENST00000287008 ATXN7L3Q14CW9 347 aaPredicted RBP17.33■□□□□ 0.36
PCDH1-201ENST00000287008 OR1Q1Q15612 314 aa17.33■□□□□ 0.36
PCDH1-201ENST00000287008 GALNT11Q8NCW6 608 aa17.33■□□□□ 0.36
PCDH1-201ENST00000287008 OR10A5Q9H207 317 aa17.33■□□□□ 0.36
PCDH1-201ENST00000287008 UCKL1Q9NWZ5 548 aa17.33■□□□□ 0.36
PCDH1-201ENST00000287008 ITGB4P16144 1822 aa17.33■□□□□ 0.36
PCDH1-201ENST00000287008 PCDH17O14917 1159 aa17.33■□□□□ 0.36
PCDH1-201ENST00000287008 BPNT1O95861 308 aa17.33■□□□□ 0.36
PCDH1-201ENST00000287008 ENTPD8Q5MY95 495 aa17.33■□□□□ 0.36
PCDH1-201ENST00000287008 ARSKQ6UWY0 536 aa17.33■□□□□ 0.36
PCDH1-201ENST00000287008 CBLL1Q75N03 491 aa17.33■□□□□ 0.36
PCDH1-201ENST00000287008 Q8N402 240 aa17.33■□□□□ 0.36
PCDH1-201ENST00000287008 TMEM178AQ8NBL3 297 aa17.33■□□□□ 0.36
PCDH1-201ENST00000287008 SLC46A1Q96NT5 459 aa17.33■□□□□ 0.36
PCDH1-201ENST00000287008 FAM86C1Q9NVL1 165 aa17.33■□□□□ 0.36
PCDH1-201ENST00000287008 H0Y8X5 98 aa17.32■□□□□ 0.36
PCDH1-201ENST00000287008 CTNSO60931 367 aa17.32■□□□□ 0.36
PCDH1-201ENST00000287008 SFTPBP07988 381 aa17.32■□□□□ 0.36
PCDH1-201ENST00000287008 WNT4P56705 351 aa17.32■□□□□ 0.36
PCDH1-201ENST00000287008 MISPQ8IVT2 679 aa17.32■□□□□ 0.36
PCDH1-201ENST00000287008 ADGRG5Q8IZF4 528 aa17.32■□□□□ 0.36
PCDH1-201ENST00000287008 OR8J2Q8NGG1 315 aa17.32■□□□□ 0.36
PCDH1-201ENST00000287008 NPRL2Q8WTW4 380 aa17.32■□□□□ 0.36
PCDH1-201ENST00000287008 LCORQ96JN0 433 aaPredicted RBP17.32■□□□□ 0.36
PCDH1-201ENST00000287008 ABCG5Q9H222 651 aa17.32■□□□□ 0.36
PCDH1-201ENST00000287008 FKBP14Q9NWM8 211 aa17.32■□□□□ 0.36
PCDH1-201ENST00000287008 INTS6Q9UL03 887 aaKnown RBP17.32■□□□□ 0.36
PCDH1-201ENST00000287008 SLC6A5Q9Y345 797 aa17.32■□□□□ 0.36
PCDH1-201ENST00000287008 TVP23AA6NH52 213 aa17.32■□□□□ 0.36
PCDH1-201ENST00000287008 ANKRD30BLA7E2S9 258 aa17.32■□□□□ 0.36
PCDH1-201ENST00000287008 HCRTR1O43613 425 aa17.32■□□□□ 0.36
PCDH1-201ENST00000287008 PET100P0DJ07 73 aa17.32■□□□□ 0.36
PCDH1-201ENST00000287008 BMP4P12644 408 aa17.32■□□□□ 0.36
PCDH1-201ENST00000287008 ITGB8P26012 769 aa17.32■□□□□ 0.36
PCDH1-201ENST00000287008 PCBD1P61457 104 aa17.32■□□□□ 0.36
PCDH1-201ENST00000287008 TP53I3Q53FA7 332 aa17.32■□□□□ 0.36
PCDH1-201ENST00000287008 CREB3L1Q96BA8 519 aa17.32■□□□□ 0.36
PCDH1-201ENST00000287008 OR10A2Q9H208 303 aa17.32■□□□□ 0.36
PCDH1-201ENST00000287008 TMEM265A0A087WTH1 108 aa17.32■□□□□ 0.36
PCDH1-201ENST00000287008 BMP1P13497 986 aa17.32■□□□□ 0.36
PCDH1-201ENST00000287008 SLC26A5P58743 744 aa17.32■□□□□ 0.36
PCDH1-201ENST00000287008 ZNF578Q96N58 590 aaPredicted RBP17.32■□□□□ 0.36
PCDH1-201ENST00000287008 TWSG1Q9GZX9 223 aa17.32■□□□□ 0.36
PCDH1-201ENST00000287008 PLEKHM1Q9Y4G2 1056 aa17.32■□□□□ 0.36
PCDH1-201ENST00000287008 A0A1B0GX78 115 aa17.32■□□□□ 0.36
PCDH1-201ENST00000287008 MAGEA3P43357 314 aa17.32■□□□□ 0.36
PCDH1-201ENST00000287008 SMAD2Q15796 467 aaKnown RBP17.32■□□□□ 0.36
PCDH1-201ENST00000287008 SHISA7A6NL88 538 aa17.31■□□□□ 0.36
PCDH1-201ENST00000287008 YES1P07947 543 aa17.31■□□□□ 0.36
PCDH1-201ENST00000287008 SLC35E2P0CK97 266 aa17.31■□□□□ 0.36
PCDH1-201ENST00000287008 PKLRP30613 574 aa17.31■□□□□ 0.36
PCDH1-201ENST00000287008 GNMTQ14749 295 aa17.31■□□□□ 0.36
PCDH1-201ENST00000287008 PIP5KL1Q5T9C9 394 aa17.31■□□□□ 0.36
PCDH1-201ENST00000287008 TMEM244Q5VVB8 128 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms