RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 AVPR1BP47901 424 aa17.01■□□□□ 0.31
PDLIM3-201ENST00000284767 FUT5Q11128 374 aa17.01■□□□□ 0.31
PDLIM3-201ENST00000284767 TMEM44Q2T9K0 475 aa17.01■□□□□ 0.31
PDLIM3-201ENST00000284767 SMUG1Q53HV7 270 aa17.01■□□□□ 0.31
PDLIM3-201ENST00000284767 MARCH9Q86YJ5 346 aa17.01■□□□□ 0.31
PDLIM3-201ENST00000284767 ZFP41Q8N8Y5 198 aa17.01■□□□□ 0.31
PDLIM3-201ENST00000284767 BBS10Q8TAM1 723 aa17.01■□□□□ 0.31
PDLIM3-201ENST00000284767 OTULINQ96BN8 352 aa17.01■□□□□ 0.31
PDLIM3-201ENST00000284767 SENP5Q96HI0 755 aaPredicted RBP17.01■□□□□ 0.31
PDLIM3-201ENST00000284767 C10orf90Q96M02 699 aa17.01■□□□□ 0.31
PDLIM3-201ENST00000284767 EGLN3Q9H6Z9 239 aa17.01■□□□□ 0.31
PDLIM3-201ENST00000284767 KCMF1Q9P0J7 381 aa17.01■□□□□ 0.31
PDLIM3-201ENST00000284767 AGRPO00253 132 aa17■□□□□ 0.31
PDLIM3-201ENST00000284767 GABRPO00591 440 aa17■□□□□ 0.31
PDLIM3-201ENST00000284767 IFNGR2P38484 337 aa17■□□□□ 0.31
PDLIM3-201ENST00000284767 SNRPD2P62316 118 aaKnown RBP17■□□□□ 0.31
PDLIM3-201ENST00000284767 SIX5Q8N196 739 aa17■□□□□ 0.31
PDLIM3-201ENST00000284767 BAHD1Q8TBE0 780 aaPredicted RBP17■□□□□ 0.31
PDLIM3-201ENST00000284767 GNPDA2Q8TDQ7 276 aa17■□□□□ 0.31
PDLIM3-201ENST00000284767 ACOT12Q8WYK0 555 aa17■□□□□ 0.31
PDLIM3-201ENST00000284767 RFKQ969G6 155 aa17■□□□□ 0.31
PDLIM3-201ENST00000284767 FOLH1BQ9HBA9 442 aa17■□□□□ 0.31
PDLIM3-201ENST00000284767 BCL2L10Q9HD36 194 aa17■□□□□ 0.31
PDLIM3-201ENST00000284767 ASB6Q9NWX5 421 aa17■□□□□ 0.31
PDLIM3-201ENST00000284767 B3GNT2Q9NY97 397 aa17■□□□□ 0.31
PDLIM3-201ENST00000284767 MRPL39Q9NYK5 338 aaKnown RBP17■□□□□ 0.31
PDLIM3-201ENST00000284767 KIR2DS5A0A0G2JLQ3 304 aa17■□□□□ 0.31
PDLIM3-201ENST00000284767 A0A0G2JNG1 304 aa17■□□□□ 0.31
PDLIM3-201ENST00000284767 KIR2DS3K7RE56 304 aa17■□□□□ 0.31
PDLIM3-201ENST00000284767 ST6GAL1P15907 406 aa17■□□□□ 0.31
PDLIM3-201ENST00000284767 GALP22466 123 aa17■□□□□ 0.31
PDLIM3-201ENST00000284767 SOX18P35713 384 aa17■□□□□ 0.31
PDLIM3-201ENST00000284767 CD79BP40259 229 aa17■□□□□ 0.31
PDLIM3-201ENST00000284767 KIR2DS5Q14953 304 aa17■□□□□ 0.31
PDLIM3-201ENST00000284767 ESCO2Q56NI9 601 aa17■□□□□ 0.31
PDLIM3-201ENST00000284767 ZNF782Q6ZMW2 699 aaPredicted RBP17■□□□□ 0.31
PDLIM3-201ENST00000284767 SLC37A3Q8NCC5 494 aa17■□□□□ 0.31
PDLIM3-201ENST00000284767 OR6T1Q8NGN1 323 aa17■□□□□ 0.31
PDLIM3-201ENST00000284767 DNAJA4Q8WW22 397 aaPredicted RBP17■□□□□ 0.31
PDLIM3-201ENST00000284767 GALNT9Q9HCQ5 603 aa17■□□□□ 0.31
PDLIM3-201ENST00000284767 TEKT2Q9UIF3 430 aa17■□□□□ 0.31
PDLIM3-201ENST00000284767 FBXL21Q9UKT6 434 aa17■□□□□ 0.31
PDLIM3-201ENST00000284767 GPR52Q9Y2T5 361 aa17■□□□□ 0.31
PDLIM3-201ENST00000284767 DMDP11532 3685 aa17■□□□□ 0.31
PDLIM3-201ENST00000284767 SPAG17Q6Q759 2223 aa17■□□□□ 0.31
PDLIM3-201ENST00000284767 A0A1W2PQ72 361 aa16.99■□□□□ 0.31
PDLIM3-201ENST00000284767 CHRM4P08173 479 aa16.99■□□□□ 0.31
PDLIM3-201ENST00000284767 SMIM10L1P0DMW3 83 aa16.99■□□□□ 0.31
PDLIM3-201ENST00000284767 HK1P19367 917 aa16.99■□□□□ 0.31
PDLIM3-201ENST00000284767 M6PRP20645 277 aa16.99■□□□□ 0.31
PDLIM3-201ENST00000284767 EVI2BP34910 448 aa16.99■□□□□ 0.31
PDLIM3-201ENST00000284767 TSFMP43897 325 aaKnown RBP16.99■□□□□ 0.31
PDLIM3-201ENST00000284767 TGM3Q08188 693 aa16.99■□□□□ 0.31
PDLIM3-201ENST00000284767 ZNF57Q68EA5 555 aaPredicted RBP16.99■□□□□ 0.31
PDLIM3-201ENST00000284767 SMIM10Q96HG1 83 aa16.99■□□□□ 0.31
PDLIM3-201ENST00000284767 GFM1Q96RP9 751 aaKnown RBP16.99■□□□□ 0.31
PDLIM3-201ENST00000284767 UBL7Q96S82 380 aaPredicted RBP16.99■□□□□ 0.31
PDLIM3-201ENST00000284767 TMED9Q9BVK6 235 aa16.99■□□□□ 0.31
PDLIM3-201ENST00000284767 HDHD5Q9BXW7 423 aa16.99■□□□□ 0.31
PDLIM3-201ENST00000284767 IL21RQ9HBE5 538 aa16.99■□□□□ 0.31
PDLIM3-201ENST00000284767 ATP13A2Q9NQ11 1180 aa16.99■□□□□ 0.31
PDLIM3-201ENST00000284767 TMEM265A0A087WTH1 108 aa16.99■□□□□ 0.31
PDLIM3-201ENST00000284767 CASC3O15234 703 aaKnown RBP16.99■□□□□ 0.31
PDLIM3-201ENST00000284767 ZNF217O75362 1048 aa16.99■□□□□ 0.31
PDLIM3-201ENST00000284767 NCR1O76036 304 aa16.99■□□□□ 0.31
PDLIM3-201ENST00000284767 LALBAP00709 142 aa16.99■□□□□ 0.31
PDLIM3-201ENST00000284767 MPIP34949 423 aa16.99■□□□□ 0.31
PDLIM3-201ENST00000284767 ATP12AP54707 1039 aa16.99■□□□□ 0.31
PDLIM3-201ENST00000284767 CDH11P55287 796 aa16.99■□□□□ 0.31
PDLIM3-201ENST00000284767 VSX2P58304 361 aaPredicted RBP16.99■□□□□ 0.31
PDLIM3-201ENST00000284767 LSM11P83369 360 aaKnown RBP eCLIP16.99■□□□□ 0.31
PDLIM3-201ENST00000284767 SRSF5Q13243 272 aaKnown RBP16.99■□□□□ 0.31
PDLIM3-201ENST00000284767 C6orf132Q5T0Z8 1188 aa16.99■□□□□ 0.31
PDLIM3-201ENST00000284767 SHFQ7M4L6 423 aa16.99■□□□□ 0.31
PDLIM3-201ENST00000284767 LHFPL3Q86UP9 236 aa16.99■□□□□ 0.31
PDLIM3-201ENST00000284767 KLHL36Q8N4N3 616 aa16.99■□□□□ 0.31
PDLIM3-201ENST00000284767 TMEM52Q8NDY8 209 aa16.99■□□□□ 0.31
PDLIM3-201ENST00000284767 DCLRE1CQ96SD1 692 aaKnown RBP16.99■□□□□ 0.31
PDLIM3-201ENST00000284767 DHRS9Q9BPW9 319 aa16.99■□□□□ 0.31
PDLIM3-201ENST00000284767 RNF32Q9H0A6 362 aa16.99■□□□□ 0.31
PDLIM3-201ENST00000284767 TBC1D17Q9HA65 648 aa16.99■□□□□ 0.31
PDLIM3-201ENST00000284767 DAPP1Q9UN19 280 aa16.99■□□□□ 0.31
PDLIM3-201ENST00000284767 SATB2Q9UPW6 733 aa16.99■□□□□ 0.31
PDLIM3-201ENST00000284767 ZNF780BQ9Y6R6 833 aa16.99■□□□□ 0.31
PDLIM3-201ENST00000284767 A0A0J9YY10 115 aa16.98■□□□□ 0.31
PDLIM3-201ENST00000284767 OR5K3A6NET4 321 aa16.98■□□□□ 0.31
PDLIM3-201ENST00000284767 SDC3O75056 442 aa16.98■□□□□ 0.31
PDLIM3-201ENST00000284767 LDB3O75112 727 aa16.98■□□□□ 0.31
PDLIM3-201ENST00000284767 EPPINO95925 133 aa16.98■□□□□ 0.31
PDLIM3-201ENST00000284767 IFNA8P32881 189 aa16.98■□□□□ 0.31
PDLIM3-201ENST00000284767 TNFRSF17Q02223 184 aa16.98■□□□□ 0.31
PDLIM3-201ENST00000284767 TSPAN31Q12999 210 aa16.98■□□□□ 0.31
PDLIM3-201ENST00000284767 SUZ12Q15022 739 aaKnown RBP16.98■□□□□ 0.31
PDLIM3-201ENST00000284767 CCNJQ5T5M9 372 aa16.98■□□□□ 0.31
PDLIM3-201ENST00000284767 FAM111BQ6SJ93 734 aa16.98■□□□□ 0.31
PDLIM3-201ENST00000284767 RASSF6Q6ZTQ3 369 aa16.98■□□□□ 0.31
PDLIM3-201ENST00000284767 GHDCQ8N2G8 530 aa16.98■□□□□ 0.31
PDLIM3-201ENST00000284767 C9orf62Q8N4C0 152 aa16.98■□□□□ 0.31
PDLIM3-201ENST00000284767 OR8D4Q8NGM9 314 aa16.98■□□□□ 0.31
PDLIM3-201ENST00000284767 OR52N1Q8NH53 320 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms