RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 J3KTA2 159 aa10.55□□□□□ -0.72
USP6NL-201ENST00000277575 SYT7O43581 403 aa10.55□□□□□ -0.72
USP6NL-201ENST00000277575 KIAA1024LP59773 190 aa10.55□□□□□ -0.72
USP6NL-201ENST00000277575 EEF1A2Q05639 463 aaKnown RBP10.55□□□□□ -0.72
USP6NL-201ENST00000277575 DPTQ07507 201 aa10.55□□□□□ -0.72
USP6NL-201ENST00000277575 LTB4RQ15722 352 aa10.55□□□□□ -0.72
USP6NL-201ENST00000277575 SLC35F2Q8IXU6 374 aa10.55□□□□□ -0.72
USP6NL-201ENST00000277575 GLIPR2Q9H4G4 154 aa10.55□□□□□ -0.72
USP6NL-201ENST00000277575 DDX31Q9H8H2 851 aaKnown RBP10.55□□□□□ -0.72
USP6NL-201ENST00000277575 ERVK13-1Q9NX77 482 aa10.55□□□□□ -0.72
USP6NL-201ENST00000277575 KCNIP3Q9Y2W7 256 aa10.55□□□□□ -0.72
USP6NL-201ENST00000277575 hCG_1807616A0A1W2PRN6 198 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 ZNF264O43296 627 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 SIGLEC6O43699 453 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 MRPS14O60783 128 aaKnown RBP10.54□□□□□ -0.72
USP6NL-201ENST00000277575 LCATP04180 440 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 S100A9P06702 114 aaKnown RBP10.54□□□□□ -0.72
USP6NL-201ENST00000277575 FBXO45P0C2W1 286 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 THBS2P35442 1172 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 ATXN7L3Q14CW9 347 aaPredicted RBP10.54□□□□□ -0.72
USP6NL-201ENST00000277575 ATAD3CQ5T2N8 411 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 OR14A16Q8NHC5 309 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 AKAP1Q92667 903 aaKnown RBP eCLIP10.54□□□□□ -0.72
USP6NL-201ENST00000277575 ZDHHC5Q9C0B5 715 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 TBC1D29Q9UFV1 150 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 DNAJC13O75165 2243 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 ISPDA4D126 451 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 PRKRAO75569 313 aaKnown RBP10.54□□□□□ -0.72
USP6NL-201ENST00000277575 CPNE6O95741 557 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 TMEM225BP0DP42 221 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 ANXA3P12429 323 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 ITGB8P26012 769 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 PKLRP30613 574 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 UGT2B10P36537 528 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 BCL6P41182 706 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 RAB40BQ12829 278 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 RAB11BQ15907 218 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 LEXMQ3ZCV2 418 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 UGT2A3Q6UWM9 527 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 SPARTQ8N0X7 666 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 CREB3L1Q96BA8 519 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 RADILQ96JH8 1075 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 SLC5A7Q9GZV3 580 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 THSD1Q9NS62 852 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 TESQ9UGI8 421 aaKnown RBP10.54□□□□□ -0.72
USP6NL-201ENST00000277575 FBXL3Q9UKT7 428 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 GVINP1Q7Z2Y8 2422 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 F5H5K5 113 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 RAD1O60671 282 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 BCAS1O75363 584 aaPredicted RBP10.54□□□□□ -0.72
USP6NL-201ENST00000277575 KCNK5O95279 499 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 ZNF35P13682 527 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 HTR3AP46098 478 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 PITPNBP48739 271 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 PGGHGQ32M88 737 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 PYCR3Q53H96 274 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 BAIAP2L2Q6UXY1 529 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 GPR148Q8TDV2 347 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 CHTF18Q8WVB6 975 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 FAM46BQ96A09 425 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 AMDHD1Q96NU7 426 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 OR6C1Q96RD1 312 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 ZNF442Q9H7R0 627 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 LAMB1P07942 1786 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 ZSCAN5BA6NJL1 495 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 GFYI3L273 518 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 AP1G1O43747 822 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 SLC16A7O60669 478 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 B3GALT4O96024 378 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 IFNA7P01567 189 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 ACPPP15309 386 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 POLR2IP36954 125 aaKnown RBP10.54□□□□□ -0.72
USP6NL-201ENST00000277575 SLC19A1P41440 591 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 CXCR4P61073 352 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 CDNFQ49AH0 187 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 Q6ZNB5 142 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 POGLUT1Q8NBL1 392 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 SPRYD4Q8WW59 207 aaPredicted RBP10.54□□□□□ -0.72
USP6NL-201ENST00000277575 GATA6Q92908 595 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 INTS14Q96SY0 518 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 MNTQ99583 582 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 SLC6A7Q99884 636 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 CACNG6Q9BXT2 260 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 EVA1AQ9H8M9 152 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 PLEK2Q9NYT0 353 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 MCTS1Q9ULC4 181 aaKnown RBP10.54□□□□□ -0.72
USP6NL-201ENST00000277575 ZNF337Q9Y3M9 751 aa10.54□□□□□ -0.72
USP6NL-201ENST00000277575 A0A1W2PQL4 384 aaPredicted RBP10.53□□□□□ -0.72
USP6NL-201ENST00000277575 VNN2O95498 520 aa10.53□□□□□ -0.72
USP6NL-201ENST00000277575 C21orf33P30042 268 aaPredicted RBP10.53□□□□□ -0.72
USP6NL-201ENST00000277575 MAGEA2P43356 314 aa10.53□□□□□ -0.72
USP6NL-201ENST00000277575 DCDP81605 110 aaKnown RBP10.53□□□□□ -0.72
USP6NL-201ENST00000277575 EIF2B1Q14232 305 aaKnown RBP10.53□□□□□ -0.72
USP6NL-201ENST00000277575 GRK1Q15835 563 aa10.53□□□□□ -0.72
USP6NL-201ENST00000277575 ZNF181Q2M3W8 571 aa10.53□□□□□ -0.72
USP6NL-201ENST00000277575 RNASE10Q5GAN6 216 aaKnown RBP10.53□□□□□ -0.72
USP6NL-201ENST00000277575 SLC48A1Q6P1K1 146 aa10.53□□□□□ -0.72
USP6NL-201ENST00000277575 PAPD4Q6PIY7 484 aaKnown RBP10.53□□□□□ -0.72
USP6NL-201ENST00000277575 CCBE1Q6UXH8 406 aaPredicted RBP10.53□□□□□ -0.72
USP6NL-201ENST00000277575 PIAS4Q8N2W9 510 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms