RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 TRIM61Q5EBN2 209 aa11.99□□□□□ -0.49
C9orf3-201ENST00000277198 HMGN2P46Q86SG4 172 aa11.99□□□□□ -0.49
C9orf3-201ENST00000277198 PAQR7Q86WK9 346 aa11.99□□□□□ -0.49
C9orf3-201ENST00000277198 TRIM63Q969Q1 353 aa11.99□□□□□ -0.49
C9orf3-201ENST00000277198 SLC22A18Q96BI1 424 aa11.99□□□□□ -0.49
C9orf3-201ENST00000277198 TMED9Q9BVK6 235 aa11.99□□□□□ -0.49
C9orf3-201ENST00000277198 PRR14Q9BWN1 585 aa11.99□□□□□ -0.49
C9orf3-201ENST00000277198 HDHD5Q9BXW7 423 aa11.99□□□□□ -0.49
C9orf3-201ENST00000277198 UBQLN3Q9H347 655 aa11.99□□□□□ -0.49
C9orf3-201ENST00000277198 NIPAL2Q9H841 368 aa11.99□□□□□ -0.49
C9orf3-201ENST00000277198 EQTNQ9NQ60 294 aa11.99□□□□□ -0.49
C9orf3-201ENST00000277198 BABAM2Q9NXR7 383 aa11.99□□□□□ -0.49
C9orf3-201ENST00000277198 NUFIP1Q9UHK0 495 aaKnown RBP11.99□□□□□ -0.49
C9orf3-201ENST00000277198 ZFR2Q9UPR6 939 aaKnown RBP11.99□□□□□ -0.49
C9orf3-201ENST00000277198 WDR45Q9Y484 360 aa11.99□□□□□ -0.49
C9orf3-201ENST00000277198 CEP192Q8TEP8 1941 aa11.99□□□□□ -0.49
C9orf3-201ENST00000277198 PI4KAP42356 2102 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 TRAPPC13A5PLN9 417 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 OR52A4PA6NMU1 304 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 HPGDSO60760 199 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 RGS9O75916 674 aaPredicted RBP11.98□□□□□ -0.49
C9orf3-201ENST00000277198 ZIC2O95409 532 aaPredicted RBP11.98□□□□□ -0.49
C9orf3-201ENST00000277198 THY1P04216 161 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 CFIP05156 583 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 IFI6P09912 130 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 GPR4P46093 362 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 GCGRP47871 477 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 CLDN20P56880 219 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 RAB25P57735 213 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 EEF1A1P68104 462 aaKnown RBP11.98□□□□□ -0.49
C9orf3-201ENST00000277198 BTN3A2P78410 334 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 SHC2P98077 582 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 TNFRSF17Q02223 184 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 IL18Q14116 193 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 YIF1BQ5BJH7 314 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 MEPCEQ7L2J0 689 aaKnown RBP11.98□□□□□ -0.49
C9orf3-201ENST00000277198 CXXC5Q7LFL8 322 aaKnown RBP11.98□□□□□ -0.49
C9orf3-201ENST00000277198 SHFQ7M4L6 423 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 OR52L1Q8NGH7 329 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 KLK6Q92876 244 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 AHCYL2Q96HN2 611 aaKnown RBP11.98□□□□□ -0.49
C9orf3-201ENST00000277198 MACROD1Q9BQ69 325 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 TMEM246Q9BRR3 403 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 EDEM2Q9BV94 578 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 RANGRFQ9HD47 186 aaPredicted RBP11.98□□□□□ -0.49
C9orf3-201ENST00000277198 HINT3Q9NQE9 182 aaKnown RBP11.98□□□□□ -0.49
C9orf3-201ENST00000277198 PAQR5Q9NXK6 330 aaPredicted RBP11.98□□□□□ -0.49
C9orf3-201ENST00000277198 CDV3Q9UKY7 258 aaKnown RBP11.98□□□□□ -0.49
C9orf3-201ENST00000277198 A0A0B4J293 547 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 FAM240BA0A1B0GVZ2 78 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 URADA6NGE7 173 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 GTPBP1O00178 669 aaKnown RBP11.98□□□□□ -0.49
C9orf3-201ENST00000277198 RNF13O43567 381 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 ORC5O43913 435 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 CH25HO95992 272 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 HOXB3P14651 431 aaPredicted RBP11.98□□□□□ -0.49
C9orf3-201ENST00000277198 TLX1P31314 330 aaPredicted RBP11.98□□□□□ -0.49
C9orf3-201ENST00000277198 SOX18P35713 384 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 CD79BP40259 229 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 TAS2R43P59537 309 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 SUZ12Q15022 739 aaKnown RBP11.98□□□□□ -0.49
C9orf3-201ENST00000277198 TATDN3Q17R31 274 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 STPG1Q5TH74 334 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 HACD4Q5VWC8 232 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 HBMQ6B0K9 141 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 VASNQ6EMK4 673 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 THOC7Q6I9Y2 204 aaKnown RBP11.98□□□□□ -0.49
C9orf3-201ENST00000277198 ZCCHC12Q6PEW1 402 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 TMEM91Q6ZNR0 172 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 USP53Q70EK8 1073 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 TRILQ7L0X0 811 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 ASPGQ86U10 573 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 TPRA1Q86W33 373 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 AMIGO1Q86WK6 493 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 MEX3DQ86XN8 651 aaKnown RBP11.98□□□□□ -0.49
C9orf3-201ENST00000277198 PLCZ1Q86YW0 608 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 CPOQ8IVL8 374 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 GPALPP1Q8IXQ4 340 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 SLC43A2Q8N370 569 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 LNX2Q8N448 690 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 ZFP41Q8N8Y5 198 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 SLC16A11Q8NCK7 471 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 OR7G2Q8NG99 324 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 OR4K14Q8NGD5 310 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 TMEM255BQ8WV15 326 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 KAT2AQ92830 837 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 FAM131CQ96AQ9 280 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 RNF31Q96EP0 1072 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 SERINC2Q96SA4 455 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 CD180Q99467 661 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 ZNF350Q9GZX5 532 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 PIGUQ9H490 435 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 FOLH1BQ9HBA9 442 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 TRIM36Q9NQ86 728 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 SPHK1Q9NYA1 384 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 SLC7A7Q9UM01 511 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 SATB2Q9UPW6 733 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 TMEM5Q9Y2B1 443 aa11.98□□□□□ -0.49
C9orf3-201ENST00000277198 A0A1W2PS29 197 aa11.97□□□□□ -0.49
C9orf3-201ENST00000277198 UNC119BA6NIH7 251 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms