RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 OR6C70A6NIJ9 312 aa15.02□□□□□ -0.01
TPM1-201ENST00000267996 ALG1L2C9J202 215 aa15.02□□□□□ -0.01
TPM1-201ENST00000267996 OR6B1O95007 311 aa15.02□□□□□ -0.01
TPM1-201ENST00000267996 SOX14O95416 240 aa15.02□□□□□ -0.01
TPM1-201ENST00000267996 CD63P08962 238 aa15.02□□□□□ -0.01
TPM1-201ENST00000267996 UBL4AP11441 157 aa15.02□□□□□ -0.01
TPM1-201ENST00000267996 HPGDP15428 266 aa15.02□□□□□ -0.01
TPM1-201ENST00000267996 STAT5AP42229 794 aa15.02□□□□□ -0.01
TPM1-201ENST00000267996 TMEM236Q5W0B7 351 aa15.02□□□□□ -0.01
TPM1-201ENST00000267996 DESI1Q6ICB0 168 aa15.02□□□□□ -0.01
TPM1-201ENST00000267996 LINC00114Q6XXX2 140 aa15.02□□□□□ -0.01
TPM1-201ENST00000267996 KIF18BQ86Y91 864 aa15.02□□□□□ -0.01
TPM1-201ENST00000267996 TMEM239Q8WW34 195 aa15.02□□□□□ -0.01
TPM1-201ENST00000267996 ARSGQ96EG1 525 aa15.02□□□□□ -0.01
TPM1-201ENST00000267996 FAM46AQ96IP4 442 aaKnown RBP15.02□□□□□ -0.01
TPM1-201ENST00000267996 MPP4Q96JB8 637 aa15.02□□□□□ -0.01
TPM1-201ENST00000267996 DEPDC7Q96QD5 511 aa15.02□□□□□ -0.01
TPM1-201ENST00000267996 ZNF700Q9H0M5 742 aa15.02□□□□□ -0.01
TPM1-201ENST00000267996 DUSP21Q9H596 190 aa15.02□□□□□ -0.01
TPM1-201ENST00000267996 RASSF1Q9NS23 344 aa15.02□□□□□ -0.01
TPM1-201ENST00000267996 PISDQ9UG56 409 aa15.02□□□□□ -0.01
TPM1-201ENST00000267996 PADI1Q9ULC6 663 aa15.02□□□□□ -0.01
TPM1-201ENST00000267996 HEATR5AQ86XA9 2040 aa15.02□□□□□ -0.01
TPM1-201ENST00000267996 PLD2O14939 933 aa15.01□□□□□ -0.01
TPM1-201ENST00000267996 OIP5O43482 229 aa15.01□□□□□ -0.01
TPM1-201ENST00000267996 PIP5K1CO60331 668 aa15.01□□□□□ -0.01
TPM1-201ENST00000267996 DKK1O94907 266 aa15.01□□□□□ -0.01
TPM1-201ENST00000267996 NADKO95544 446 aaPredicted RBP15.01□□□□□ -0.01
TPM1-201ENST00000267996 JMJD7P0C870 316 aa15.01□□□□□ -0.01
TPM1-201ENST00000267996 CDK4P11802 303 aa15.01□□□□□ -0.01
TPM1-201ENST00000267996 POU1F1P28069 291 aa15.01□□□□□ -0.01
TPM1-201ENST00000267996 FMO3P31513 532 aa15.01□□□□□ -0.01
TPM1-201ENST00000267996 RBM34P42696 430 aaKnown RBP15.01□□□□□ -0.01
TPM1-201ENST00000267996 IDH2P48735 452 aaKnown RBP15.01□□□□□ -0.01
TPM1-201ENST00000267996 CDC42P60953 191 aa15.01□□□□□ -0.01
TPM1-201ENST00000267996 CSNK2BP67870 215 aa15.01□□□□□ -0.01
TPM1-201ENST00000267996 PRKCDQ05655 676 aa15.01□□□□□ -0.01
TPM1-201ENST00000267996 TRIP6Q15654 476 aaKnown RBP15.01□□□□□ -0.01
TPM1-201ENST00000267996 FAM69BQ5VUD6 431 aa15.01□□□□□ -0.01
TPM1-201ENST00000267996 ULK3Q6PHR2 472 aa15.01□□□□□ -0.01
TPM1-201ENST00000267996 KIRREL2Q6UWL6 708 aa15.01□□□□□ -0.01
TPM1-201ENST00000267996 DHRS13Q6UX07 377 aa15.01□□□□□ -0.01
TPM1-201ENST00000267996 MEX3DQ86XN8 651 aaKnown RBP15.01□□□□□ -0.01
TPM1-201ENST00000267996 BPIFB6Q8NFQ5 453 aa15.01□□□□□ -0.01
TPM1-201ENST00000267996 OR5L2Q8NGL0 311 aa15.01□□□□□ -0.01
TPM1-201ENST00000267996 FAM192AQ9GZU8 254 aa15.01□□□□□ -0.01
TPM1-201ENST00000267996 LAT2Q9GZY6 243 aa15.01□□□□□ -0.01
TPM1-201ENST00000267996 SLC25A19Q9HC21 320 aa15.01□□□□□ -0.01
TPM1-201ENST00000267996 KRCC1Q9NPI7 259 aaPredicted RBP15.01□□□□□ -0.01
TPM1-201ENST00000267996 PLCXD1Q9NUJ7 323 aa15.01□□□□□ -0.01
TPM1-201ENST00000267996 CNIH4Q9P003 139 aa15.01□□□□□ -0.01
TPM1-201ENST00000267996 NPFFR2Q9Y5X5 522 aa15.01□□□□□ -0.01
TPM1-201ENST00000267996 KNTC1P50748 2209 aa15.01□□□□□ -0.01
TPM1-201ENST00000267996 EP300Q09472 2414 aaPredicted RBP15□□□□□ -0.01
TPM1-201ENST00000267996 C9orf172C9J069 976 aa15□□□□□ -0.01
TPM1-201ENST00000267996 H3BN98 237 aa15□□□□□ -0.01
TPM1-201ENST00000267996 ZNF264O43296 627 aa15□□□□□ -0.01
TPM1-201ENST00000267996 FADS1O60427 444 aa15□□□□□ -0.01
TPM1-201ENST00000267996 MPZL2O60487 215 aa15□□□□□ -0.01
TPM1-201ENST00000267996 PPM1BO75688 479 aa15□□□□□ -0.01
TPM1-201ENST00000267996 ZFAND5O76080 213 aa15□□□□□ -0.01
TPM1-201ENST00000267996 HTR1AP08908 422 aa15□□□□□ -0.01
TPM1-201ENST00000267996 NAGAP17050 411 aa15□□□□□ -0.01
TPM1-201ENST00000267996 ENDOUP21128 410 aaKnown RBP15□□□□□ -0.01
TPM1-201ENST00000267996 NBL1P41271 181 aa15□□□□□ -0.01
TPM1-201ENST00000267996 CTBP2P56545 445 aa15□□□□□ -0.01
TPM1-201ENST00000267996 NRG3P56975 720 aa15□□□□□ -0.01
TPM1-201ENST00000267996 CDK5Q00535 292 aa15□□□□□ -0.01
TPM1-201ENST00000267996 NADK2Q4G0N4 442 aa15□□□□□ -0.01
TPM1-201ENST00000267996 STPG1Q5TH74 334 aa15□□□□□ -0.01
TPM1-201ENST00000267996 BROXQ5VW32 411 aa15□□□□□ -0.01
TPM1-201ENST00000267996 FOXB2Q5VYV0 432 aa15□□□□□ -0.01
TPM1-201ENST00000267996 C6orf15Q6UXA7 325 aaPredicted RBP15□□□□□ -0.01
TPM1-201ENST00000267996 TIPARPQ7Z3E1 657 aaKnown RBP15□□□□□ -0.01
TPM1-201ENST00000267996 MRGPREQ86SM8 312 aa15□□□□□ -0.01
TPM1-201ENST00000267996 CCDC103Q8IW40 242 aa15□□□□□ -0.01
TPM1-201ENST00000267996 CLDN22Q8N7P3 220 aa15□□□□□ -0.01
TPM1-201ENST00000267996 PHOSPHO1Q8TCT1 267 aa15□□□□□ -0.01
TPM1-201ENST00000267996 ELP5Q8TE02 316 aa15□□□□□ -0.01
TPM1-201ENST00000267996 SGCDQ92629 289 aa15□□□□□ -0.01
TPM1-201ENST00000267996 IMMP1LQ96LU5 166 aa15□□□□□ -0.01
TPM1-201ENST00000267996 LRFN3Q9BTN0 628 aa15□□□□□ -0.01
TPM1-201ENST00000267996 POLR1BQ9H9Y6 1135 aa15□□□□□ -0.01
TPM1-201ENST00000267996 LIN28AQ9H9Z2 209 aaKnown RBP15□□□□□ -0.01
TPM1-201ENST00000267996 PAK1IP1Q9NWT1 392 aaPredicted RBP15□□□□□ -0.01
TPM1-201ENST00000267996 IMPAD1Q9NX62 359 aa15□□□□□ -0.01
TPM1-201ENST00000267996 HS3ST3B1Q9Y662 390 aa15□□□□□ -0.01
TPM1-201ENST00000267996 IGHV1-45A0A0A0MS14 117 aa15□□□□□ -0.01
TPM1-201ENST00000267996 ADAM10O14672 748 aa15□□□□□ -0.01
TPM1-201ENST00000267996 XPNPEP2O43895 674 aa15□□□□□ -0.01
TPM1-201ENST00000267996 FOXD2O60548 495 aaPredicted RBP15□□□□□ -0.01
TPM1-201ENST00000267996 ZNF354AO60765 605 aaPredicted RBP15□□□□□ -0.01
TPM1-201ENST00000267996 IGHEP01854 428 aa15□□□□□ -0.01
TPM1-201ENST00000267996 RAB40ALP0C0E4 278 aa15□□□□□ -0.01
TPM1-201ENST00000267996 LINGO3P0C6S8 592 aa15□□□□□ -0.01
TPM1-201ENST00000267996 COX6A1P12074 109 aa15□□□□□ -0.01
TPM1-201ENST00000267996 GIPRP48546 466 aa15□□□□□ -0.01
TPM1-201ENST00000267996 SNRPGP62308 76 aaKnown RBP15□□□□□ -0.01
TPM1-201ENST00000267996 SLC35A2P78381 396 aa15□□□□□ -0.01
TPM1-201ENST00000267996 EFR3AQ14156 821 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms