RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 TIMP4Q99727 224 aa11.53□□□□□ -0.56
CHMP2B-201ENST00000263780 OR10A4Q9H209 315 aa11.53□□□□□ -0.56
CHMP2B-201ENST00000263780 MRPL17Q9NRX2 175 aaKnown RBP11.53□□□□□ -0.56
CHMP2B-201ENST00000263780 PIPOXQ9P0Z9 390 aa11.53□□□□□ -0.56
CHMP2B-201ENST00000263780 KLHL9Q9P2J3 617 aa11.53□□□□□ -0.56
CHMP2B-201ENST00000263780 HCSTQ9UBK5 93 aa11.53□□□□□ -0.56
CHMP2B-201ENST00000263780 FAM183AA6NL82 134 aa11.53□□□□□ -0.56
CHMP2B-201ENST00000263780 J3QLW9 94 aa11.53□□□□□ -0.56
CHMP2B-201ENST00000263780 ATP1B1P05026 303 aa11.53□□□□□ -0.56
CHMP2B-201ENST00000263780 HMGN2P05204 90 aaKnown RBP11.53□□□□□ -0.56
CHMP2B-201ENST00000263780 ELFN1P0C7U0 828 aa11.53□□□□□ -0.56
CHMP2B-201ENST00000263780 PRG2P13727 222 aa11.53□□□□□ -0.56
CHMP2B-201ENST00000263780 ZNF19P17023 458 aa11.53□□□□□ -0.56
CHMP2B-201ENST00000263780 VEGFCP49767 419 aa11.53□□□□□ -0.56
CHMP2B-201ENST00000263780 SEC61A1P61619 476 aaKnown RBP11.53□□□□□ -0.56
CHMP2B-201ENST00000263780 SLC7A9P82251 487 aa11.53□□□□□ -0.56
CHMP2B-201ENST00000263780 FUT5Q11128 374 aa11.53□□□□□ -0.56
CHMP2B-201ENST00000263780 HLXQ14774 488 aaPredicted RBP11.53□□□□□ -0.56
CHMP2B-201ENST00000263780 ZNF169Q14929 603 aaPredicted RBP11.53□□□□□ -0.56
CHMP2B-201ENST00000263780 FAM46CQ5VWP2 391 aa11.53□□□□□ -0.56
CHMP2B-201ENST00000263780 OR4C11Q6IEV9 310 aa11.53□□□□□ -0.56
CHMP2B-201ENST00000263780 LINGO2Q7L985 606 aa11.53□□□□□ -0.56
CHMP2B-201ENST00000263780 CMTM8Q8IZV2 173 aa11.53□□□□□ -0.56
CHMP2B-201ENST00000263780 PHYHIPQ92561 330 aa11.53□□□□□ -0.56
CHMP2B-201ENST00000263780 NOX3Q9HBY0 568 aa11.53□□□□□ -0.56
CHMP2B-201ENST00000263780 WASH6PQ9NQA3 447 aa11.53□□□□□ -0.56
CHMP2B-201ENST00000263780 GALR3O60755 368 aaPredicted RBP11.52□□□□□ -0.56
CHMP2B-201ENST00000263780 KRT33AO76009 404 aa11.52□□□□□ -0.56
CHMP2B-201ENST00000263780 RGS11O94810 467 aa11.52□□□□□ -0.56
CHMP2B-201ENST00000263780 RCBTB2O95199 551 aa11.52□□□□□ -0.56
CHMP2B-201ENST00000263780 TBX6O95947 436 aaPredicted RBP11.52□□□□□ -0.56
CHMP2B-201ENST00000263780 HIST1H2ABP04908 130 aa11.52□□□□□ -0.56
CHMP2B-201ENST00000263780 PROS1P07225 676 aa11.52□□□□□ -0.56
CHMP2B-201ENST00000263780 ATF1P18846 271 aa11.52□□□□□ -0.56
CHMP2B-201ENST00000263780 ACADLP28330 430 aa11.52□□□□□ -0.56
CHMP2B-201ENST00000263780 MAT2AP31153 395 aaKnown RBP11.52□□□□□ -0.56
CHMP2B-201ENST00000263780 GMFBP60983 142 aa11.52□□□□□ -0.56
CHMP2B-201ENST00000263780 E2F1Q01094 437 aa11.52□□□□□ -0.56
CHMP2B-201ENST00000263780 POU4F2Q12837 409 aa11.52□□□□□ -0.56
CHMP2B-201ENST00000263780 GK2Q14410 553 aaPredicted RBP11.52□□□□□ -0.56
CHMP2B-201ENST00000263780 SLC25A25Q6KCM7 469 aa11.52□□□□□ -0.56
CHMP2B-201ENST00000263780 HIST3H2AQ7L7L0 130 aa11.52□□□□□ -0.56
CHMP2B-201ENST00000263780 OLIG3Q7RTU3 272 aa11.52□□□□□ -0.56
CHMP2B-201ENST00000263780 GDF7Q7Z4P5 450 aa11.52□□□□□ -0.56
CHMP2B-201ENST00000263780 HMGN2P46Q86SG4 172 aa11.52□□□□□ -0.56
CHMP2B-201ENST00000263780 LMNTD1Q8N9Z9 388 aa11.52□□□□□ -0.56
CHMP2B-201ENST00000263780 FCAMRQ8WWV6 532 aa11.52□□□□□ -0.56
CHMP2B-201ENST00000263780 THAP4Q8WY91 577 aa11.52□□□□□ -0.56
CHMP2B-201ENST00000263780 HIST1H2ACQ93077 130 aa11.52□□□□□ -0.56
CHMP2B-201ENST00000263780 SIPA1Q96FS4 1042 aa11.52□□□□□ -0.56
CHMP2B-201ENST00000263780 C4orf36Q96KX1 117 aa11.52□□□□□ -0.56
CHMP2B-201ENST00000263780 CXorf58Q96LI9 332 aa11.52□□□□□ -0.56
CHMP2B-201ENST00000263780 LINC00615Q96LM1 132 aaPredicted RBP11.52□□□□□ -0.56
CHMP2B-201ENST00000263780 YIPF4Q9BSR8 244 aa11.52□□□□□ -0.56
CHMP2B-201ENST00000263780 DPH7Q9BTV6 452 aa11.52□□□□□ -0.56
CHMP2B-201ENST00000263780 ZNF69Q9UC07 566 aa11.52□□□□□ -0.56
CHMP2B-201ENST00000263780 RCE1Q9Y256 329 aa11.52□□□□□ -0.56
CHMP2B-201ENST00000263780 ASF1AQ9Y294 204 aa11.52□□□□□ -0.56
CHMP2B-201ENST00000263780 OR2M5A3KFT3 312 aa11.52□□□□□ -0.57
CHMP2B-201ENST00000263780 ARPC1BO15143 372 aaKnown RBP11.52□□□□□ -0.57
CHMP2B-201ENST00000263780 KHDRBS3O75525 346 aaKnown RBP11.52□□□□□ -0.57
CHMP2B-201ENST00000263780 LEFTY1O75610 366 aa11.52□□□□□ -0.57
CHMP2B-201ENST00000263780 MAPK3P27361 379 aaPredicted RBP11.52□□□□□ -0.57
CHMP2B-201ENST00000263780 DLX5P56178 289 aa11.52□□□□□ -0.57
CHMP2B-201ENST00000263780 REEP5Q00765 189 aa11.52□□□□□ -0.57
CHMP2B-201ENST00000263780 ZMYND11Q15326 602 aa11.52□□□□□ -0.57
CHMP2B-201ENST00000263780 C9orf131Q5VYM1 1079 aa11.52□□□□□ -0.57
CHMP2B-201ENST00000263780 TMUB2Q71RG4 321 aa11.52□□□□□ -0.57
CHMP2B-201ENST00000263780 VRK2Q86Y07 508 aa11.52□□□□□ -0.57
CHMP2B-201ENST00000263780 RNF113BQ8IZP6 322 aaKnown RBP11.52□□□□□ -0.57
CHMP2B-201ENST00000263780 GANCQ8TET4 914 aa11.52□□□□□ -0.57
CHMP2B-201ENST00000263780 GHSRQ92847 366 aa11.52□□□□□ -0.57
CHMP2B-201ENST00000263780 PGLYRP3Q96LB9 341 aa11.52□□□□□ -0.57
CHMP2B-201ENST00000263780 CD180Q99467 661 aa11.52□□□□□ -0.57
CHMP2B-201ENST00000263780 UTP23Q9BRU9 249 aaKnown RBP11.52□□□□□ -0.57
CHMP2B-201ENST00000263780 MRI1Q9BV20 369 aa11.52□□□□□ -0.57
CHMP2B-201ENST00000263780 SLC38A1Q9H2H9 487 aa11.52□□□□□ -0.57
CHMP2B-201ENST00000263780 ZNF334Q9HCZ1 680 aaPredicted RBP11.52□□□□□ -0.57
CHMP2B-201ENST00000263780 FLVCR2Q9UPI3 526 aa11.52□□□□□ -0.57
CHMP2B-201ENST00000263780 PRELID3BQ9Y3B1 194 aa11.52□□□□□ -0.57
CHMP2B-201ENST00000263780 UBE2QL1A1L167 161 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 D6RAR5 112 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 E9PI62 339 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 EMC8O43402 210 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 RPN2P04844 631 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 LPLP06858 475 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 CLTBP09497 229 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 TRHRP34981 398 aaPredicted RBP11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 ACVR1BP36896 505 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 SSR2P43308 183 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 MAZP56270 477 aaKnown RBP11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 TLE2Q04725 743 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 ARSIQ5FYB1 569 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 SHEQ5VZ18 495 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 OLFML2AQ68BL7 652 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 ZC3H14Q6PJT7 736 aaKnown RBP11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 NUDT18Q6ZVK8 323 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 PRSS45Q7RTY3 260 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 DCUN1D3Q8IWE4 304 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 LNX2Q8N448 690 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms