RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 ANKRD19PQ9H560 264 aa20.75■□□□□ 0.91
UFD1-201ENST00000263202 EIF4E2O60573 245 aaKnown RBP20.74■□□□□ 0.91
UFD1-201ENST00000263202 RYKP34925 604 aa20.74■□□□□ 0.91
UFD1-201ENST00000263202 GAS1P54826 345 aa20.74■□□□□ 0.91
UFD1-201ENST00000263202 FAHD1Q6P587 224 aa20.74■□□□□ 0.91
UFD1-201ENST00000263202 PODNL1Q6PEZ8 512 aa20.74■□□□□ 0.91
UFD1-201ENST00000263202 ZNF613Q6PF04 617 aa20.74■□□□□ 0.91
UFD1-201ENST00000263202 DND1Q8IYX4 353 aaKnown RBP20.74■□□□□ 0.91
UFD1-201ENST00000263202 TRIM2Q9C040 744 aa20.74■□□□□ 0.91
UFD1-201ENST00000263202 TMEM27Q9HBJ8 222 aa20.74■□□□□ 0.91
UFD1-201ENST00000263202 TMEFF2Q9UIK5 374 aaPredicted RBP20.74■□□□□ 0.91
UFD1-201ENST00000263202 SLC7A7Q9UM01 511 aa20.74■□□□□ 0.91
UFD1-201ENST00000263202 C15orf41Q9Y2V0 281 aa20.74■□□□□ 0.91
UFD1-201ENST00000263202 CHCHD2Q9Y6H1 151 aaPredicted RBP20.74■□□□□ 0.91
UFD1-201ENST00000263202 FREM2Q5SZK8 3169 aa20.74■□□□□ 0.91
UFD1-201ENST00000263202 PCNX3Q9H6A9 2034 aa20.74■□□□□ 0.91
UFD1-201ENST00000263202 SH3PXD2BA1X283 911 aa20.74■□□□□ 0.91
UFD1-201ENST00000263202 FAAHO00519 579 aa20.74■□□□□ 0.91
UFD1-201ENST00000263202 NKX2-8O15522 239 aa20.74■□□□□ 0.91
UFD1-201ENST00000263202 LYPD3O95274 346 aa20.74■□□□□ 0.91
UFD1-201ENST00000263202 THRBP10828 461 aa20.74■□□□□ 0.91
UFD1-201ENST00000263202 MEP1AQ16819 746 aa20.74■□□□□ 0.91
UFD1-201ENST00000263202 ACER2Q5QJU3 275 aa20.74■□□□□ 0.91
UFD1-201ENST00000263202 MISPQ8IVT2 679 aa20.74■□□□□ 0.91
UFD1-201ENST00000263202 TMEM156Q8N614 296 aa20.74■□□□□ 0.91
UFD1-201ENST00000263202 TMCO5AQ8N6Q1 288 aa20.74■□□□□ 0.91
UFD1-201ENST00000263202 OR9Q2Q8NGE9 314 aa20.74■□□□□ 0.91
UFD1-201ENST00000263202 THAP4Q8WY91 577 aa20.74■□□□□ 0.91
UFD1-201ENST00000263202 SH3YL1Q96HL8 342 aaPredicted RBP20.74■□□□□ 0.91
UFD1-201ENST00000263202 FEVQ99581 238 aa20.74■□□□□ 0.91
UFD1-201ENST00000263202 ARRDC5A6NEK1 342 aa20.73■□□□□ 0.91
UFD1-201ENST00000263202 TP53I11O14683 189 aa20.73■□□□□ 0.91
UFD1-201ENST00000263202 HCRTR2O43614 444 aa20.73■□□□□ 0.91
UFD1-201ENST00000263202 PTGDSP41222 190 aa20.73■□□□□ 0.91
UFD1-201ENST00000263202 BICRALQ6AI39 1079 aa20.73■□□□□ 0.91
UFD1-201ENST00000263202 KDM4DQ6B0I6 523 aa20.73■□□□□ 0.91
UFD1-201ENST00000263202 ZNF770Q6IQ21 691 aaPredicted RBP20.73■□□□□ 0.91
UFD1-201ENST00000263202 NKAIN4Q8IVV8 208 aa20.73■□□□□ 0.91
UFD1-201ENST00000263202 ATG16L2Q8NAA4 619 aa20.73■□□□□ 0.91
UFD1-201ENST00000263202 CLEC1AQ8NC01 280 aa20.73■□□□□ 0.91
UFD1-201ENST00000263202 DUSP19Q8WTR2 217 aa20.73■□□□□ 0.91
UFD1-201ENST00000263202 GALNT9Q9HCQ5 603 aa20.73■□□□□ 0.91
UFD1-201ENST00000263202 SMPD3Q9NY59 655 aaPredicted RBP20.73■□□□□ 0.91
UFD1-201ENST00000263202 ICAM5Q9UMF0 924 aa20.73■□□□□ 0.91
UFD1-201ENST00000263202 A0A0B4J2E0 115 aa20.72■□□□□ 0.91
UFD1-201ENST00000263202 A0A1B0GWA3 101 aa20.72■□□□□ 0.91
UFD1-201ENST00000263202 A0A1B0GX12 115 aa20.72■□□□□ 0.91
UFD1-201ENST00000263202 LINGO3P0C6S8 592 aa20.72■□□□□ 0.91
UFD1-201ENST00000263202 ITGA3P26006 1051 aa20.72■□□□□ 0.91
UFD1-201ENST00000263202 HSPA13P48723 471 aa20.72■□□□□ 0.91
UFD1-201ENST00000263202 ZNF468Q5VIY5 522 aaPredicted RBP20.72■□□□□ 0.91
UFD1-201ENST00000263202 FGF11Q92914 225 aa20.72■□□□□ 0.91
UFD1-201ENST00000263202 SLC38A4Q969I6 547 aa20.72■□□□□ 0.91
UFD1-201ENST00000263202 KLHDC3Q9BQ90 382 aa20.72■□□□□ 0.91
UFD1-201ENST00000263202 PRSS27Q9BQR3 290 aa20.72■□□□□ 0.91
UFD1-201ENST00000263202 LHPPQ9H008 270 aa20.72■□□□□ 0.91
UFD1-201ENST00000263202 METTL7AQ9H8H3 244 aa20.72■□□□□ 0.91
UFD1-201ENST00000263202 KLRF1Q9NZS2 232 aa20.72■□□□□ 0.91
UFD1-201ENST00000263202 KIF17Q9P2E2 1029 aa20.72■□□□□ 0.91
UFD1-201ENST00000263202 MED13Q9UHV7 2174 aa20.71■□□□□ 0.91
UFD1-201ENST00000263202 A0A087WUU8 490 aa20.71■□□□□ 0.91
UFD1-201ENST00000263202 SNAP29O95721 258 aa20.71■□□□□ 0.91
UFD1-201ENST00000263202 PRKAR1AP10644 381 aa20.71■□□□□ 0.91
UFD1-201ENST00000263202 ANXA8P13928 327 aa20.71■□□□□ 0.91
UFD1-201ENST00000263202 CASP3P42574 277 aa20.71■□□□□ 0.91
UFD1-201ENST00000263202 CCR4P51679 360 aa20.71■□□□□ 0.91
UFD1-201ENST00000263202 C17orf67Q0P5P2 114 aa20.71■□□□□ 0.91
UFD1-201ENST00000263202 NHSL2Q5HYW2 709 aa20.71■□□□□ 0.91
UFD1-201ENST00000263202 CADM2Q8N3J6 435 aa20.71■□□□□ 0.91
UFD1-201ENST00000263202 TOR1AIP2Q8NFQ8 470 aa20.71■□□□□ 0.91
UFD1-201ENST00000263202 SECISBP2Q96T21 854 aaKnown RBP20.71■□□□□ 0.91
UFD1-201ENST00000263202 HPF1Q9NWY4 346 aa20.71■□□□□ 0.91
UFD1-201ENST00000263202 MSRB2Q9Y3D2 182 aa20.71■□□□□ 0.91
UFD1-201ENST00000263202 C2orf72A6NCS6 295 aa20.71■□□□□ 0.91
UFD1-201ENST00000263202 ARGFXA6NJG6 315 aa20.71■□□□□ 0.91
UFD1-201ENST00000263202 NTN1O95631 604 aa20.71■□□□□ 0.91
UFD1-201ENST00000263202 CBLP22681 906 aa20.71■□□□□ 0.91
UFD1-201ENST00000263202 IGFBP5P24593 272 aa20.71■□□□□ 0.91
UFD1-201ENST00000263202 SLC6A8P48029 635 aa20.71■□□□□ 0.91
UFD1-201ENST00000263202 TMEM81Q6P7N7 255 aa20.71■□□□□ 0.91
UFD1-201ENST00000263202 APLFQ8IW19 511 aaPredicted RBP20.71■□□□□ 0.91
UFD1-201ENST00000263202 BEST3Q8N1M1 668 aa20.71■□□□□ 0.91
UFD1-201ENST00000263202 SH2D2AQ9NP31 389 aa20.71■□□□□ 0.91
UFD1-201ENST00000263202 OR10H3O60404 316 aa20.7■□□□□ 0.9
UFD1-201ENST00000263202 GASTP01350 101 aa20.7■□□□□ 0.9
UFD1-201ENST00000263202 IDH2P48735 452 aaKnown RBP20.7■□□□□ 0.9
UFD1-201ENST00000263202 P2RX1P51575 399 aa20.7■□□□□ 0.9
UFD1-201ENST00000263202 COPZ1P61923 177 aa20.7■□□□□ 0.9
UFD1-201ENST00000263202 LSM11P83369 360 aaKnown RBP eCLIP20.7■□□□□ 0.9
UFD1-201ENST00000263202 TAF11Q15544 211 aa20.7■□□□□ 0.9
UFD1-201ENST00000263202 CRTC2Q53ET0 693 aaPredicted RBP20.7■□□□□ 0.9
UFD1-201ENST00000263202 C6orf52Q5T4I8 152 aa20.7■□□□□ 0.9
UFD1-201ENST00000263202 WDR88Q6ZMY6 472 aa20.7■□□□□ 0.9
UFD1-201ENST00000263202 LINC00471Q8N535 108 aa20.7■□□□□ 0.9
UFD1-201ENST00000263202 AQP11Q8NBQ7 271 aa20.7■□□□□ 0.9
UFD1-201ENST00000263202 OR4K5Q8NGD3 323 aa20.7■□□□□ 0.9
UFD1-201ENST00000263202 OR5W2Q8NH69 310 aa20.7■□□□□ 0.9
UFD1-201ENST00000263202 B4GALNT2Q8NHY0 566 aa20.7■□□□□ 0.9
UFD1-201ENST00000263202 PAQR8Q8TEZ7 354 aa20.7■□□□□ 0.9
UFD1-201ENST00000263202 TMEM255BQ8WV15 326 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms