RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 OTX2P32243 289 aa20.98■□□□□ 0.95
SMARCB1-201ENST00000263121 NOVA1P51513 510 aaKnown RBP20.98■□□□□ 0.95
SMARCB1-201ENST00000263121 RPS6KA3P51812 740 aa20.98■□□□□ 0.95
SMARCB1-201ENST00000263121 WDR88Q6ZMY6 472 aa20.98■□□□□ 0.95
SMARCB1-201ENST00000263121 MBOAT2Q6ZWT7 520 aa20.98■□□□□ 0.95
SMARCB1-201ENST00000263121 HGDQ93099 445 aa20.98■□□□□ 0.95
SMARCB1-201ENST00000263121 ZNF160Q9HCG1 818 aa20.98■□□□□ 0.95
SMARCB1-201ENST00000263121 ADAM10O14672 748 aa20.97■□□□□ 0.95
SMARCB1-201ENST00000263121 CHP2O43745 196 aa20.97■□□□□ 0.95
SMARCB1-201ENST00000263121 EVI2BP34910 448 aa20.97■□□□□ 0.95
SMARCB1-201ENST00000263121 IFNGR2P38484 337 aa20.97■□□□□ 0.95
SMARCB1-201ENST00000263121 RAPSNQ13702 412 aa20.97■□□□□ 0.95
SMARCB1-201ENST00000263121 THAP5Q7Z6K1 395 aa20.97■□□□□ 0.95
SMARCB1-201ENST00000263121 MARCH3Q86UD3 253 aa20.97■□□□□ 0.95
SMARCB1-201ENST00000263121 SLC22A8Q8TCC7 542 aa20.97■□□□□ 0.95
SMARCB1-201ENST00000263121 ADAMTS14Q8WXS8 1223 aa20.97■□□□□ 0.95
SMARCB1-201ENST00000263121 HRASLS5Q96KN8 279 aa20.97■□□□□ 0.95
SMARCB1-201ENST00000263121 TBL1XR1Q9BZK7 514 aa20.97■□□□□ 0.95
SMARCB1-201ENST00000263121 LAT2Q9GZY6 243 aa20.97■□□□□ 0.95
SMARCB1-201ENST00000263121 CARD8Q9Y2G2 431 aa20.97■□□□□ 0.95
SMARCB1-201ENST00000263121 GMPPBQ9Y5P6 360 aa20.97■□□□□ 0.95
SMARCB1-201ENST00000263121 LOC101059948A0A1B0GTJ6 334 aa20.96■□□□□ 0.95
SMARCB1-201ENST00000263121 EIF4E1BA6NMX2 242 aaKnown RBP20.96■□□□□ 0.95
SMARCB1-201ENST00000263121 CDRT15L2A8MXV6 281 aa20.96■□□□□ 0.95
SMARCB1-201ENST00000263121 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.96■□□□□ 0.95
SMARCB1-201ENST00000263121 GTPBP1O00178 669 aaKnown RBP20.96■□□□□ 0.95
SMARCB1-201ENST00000263121 OR2J2O76002 312 aa20.96■□□□□ 0.95
SMARCB1-201ENST00000263121 TNFAIP8O95379 198 aa20.96■□□□□ 0.95
SMARCB1-201ENST00000263121 ENDOUP21128 410 aaKnown RBP20.96■□□□□ 0.95
SMARCB1-201ENST00000263121 RYKP34925 604 aa20.96■□□□□ 0.95
SMARCB1-201ENST00000263121 OMPP47874 163 aa20.96■□□□□ 0.95
SMARCB1-201ENST00000263121 FBXW4P57775 412 aa20.96■□□□□ 0.95
SMARCB1-201ENST00000263121 ESRRGP62508 458 aa20.96■□□□□ 0.95
SMARCB1-201ENST00000263121 RPP38P78345 283 aaKnown RBP20.96■□□□□ 0.95
SMARCB1-201ENST00000263121 COX10Q12887 443 aa20.96■□□□□ 0.95
SMARCB1-201ENST00000263121 CBLN3Q6UW01 205 aa20.96■□□□□ 0.95
SMARCB1-201ENST00000263121 PRICKLE2Q7Z3G6 844 aa20.96■□□□□ 0.95
SMARCB1-201ENST00000263121 SLC15A4Q8N697 577 aa20.96■□□□□ 0.95
SMARCB1-201ENST00000263121 PIGXQ8TBF5 258 aa20.96■□□□□ 0.95
SMARCB1-201ENST00000263121 GRHL3Q8TE85 626 aa20.96■□□□□ 0.95
SMARCB1-201ENST00000263121 RNF138Q8WVD3 245 aa20.96■□□□□ 0.95
SMARCB1-201ENST00000263121 GPA33Q99795 319 aa20.96■□□□□ 0.95
SMARCB1-201ENST00000263121 ZNF696Q9H7X3 374 aa20.96■□□□□ 0.95
SMARCB1-201ENST00000263121 NDUFB5O43674 189 aa20.96■□□□□ 0.95
SMARCB1-201ENST00000263121 HPP00738 406 aa20.96■□□□□ 0.95
SMARCB1-201ENST00000263121 FBXO45P0C2W1 286 aa20.96■□□□□ 0.95
SMARCB1-201ENST00000263121 OSMP13725 252 aa20.96■□□□□ 0.95
SMARCB1-201ENST00000263121 CD82P27701 267 aa20.96■□□□□ 0.95
SMARCB1-201ENST00000263121 TMED10P49755 219 aaKnown RBP20.96■□□□□ 0.95
SMARCB1-201ENST00000263121 ISL1P61371 349 aa20.96■□□□□ 0.95
SMARCB1-201ENST00000263121 ZNF117Q03924 483 aa20.96■□□□□ 0.95
SMARCB1-201ENST00000263121 ISLR2Q6UXK2 745 aa20.96■□□□□ 0.95
SMARCB1-201ENST00000263121 RRM2BQ7LG56 351 aa20.96■□□□□ 0.95
SMARCB1-201ENST00000263121 NUP54Q7Z3B4 507 aa20.96■□□□□ 0.95
SMARCB1-201ENST00000263121 GNPDA2Q8TDQ7 276 aa20.96■□□□□ 0.95
SMARCB1-201ENST00000263121 NODALQ96S42 347 aa20.96■□□□□ 0.95
SMARCB1-201ENST00000263121 RASL10BQ96S79 203 aa20.96■□□□□ 0.95
SMARCB1-201ENST00000263121 PTPRBP23467 1997 aa20.95■□□□□ 0.94
SMARCB1-201ENST00000263121 PCSK5Q92824 1860 aa20.95■□□□□ 0.94
SMARCB1-201ENST00000263121 EIF4E2O60573 245 aaKnown RBP20.95■□□□□ 0.94
SMARCB1-201ENST00000263121 TP53P04637 393 aaPredicted RBP20.95■□□□□ 0.94
SMARCB1-201ENST00000263121 GSSP48637 474 aa20.95■□□□□ 0.94
SMARCB1-201ENST00000263121 TPD52P55327 224 aaPredicted RBP20.95■□□□□ 0.94
SMARCB1-201ENST00000263121 IL10RAQ13651 578 aa20.95■□□□□ 0.94
SMARCB1-201ENST00000263121 ULK3Q6PHR2 472 aa20.95■□□□□ 0.94
SMARCB1-201ENST00000263121 Q6ZPB1 254 aaPredicted RBP20.95■□□□□ 0.94
SMARCB1-201ENST00000263121 CCDC71Q8IV32 467 aaPredicted RBP20.95■□□□□ 0.94
SMARCB1-201ENST00000263121 NRMQ8IXM6 262 aa20.95■□□□□ 0.94
SMARCB1-201ENST00000263121 RNF113BQ8IZP6 322 aaKnown RBP20.95■□□□□ 0.94
SMARCB1-201ENST00000263121 GALNT15Q8N3T1 639 aa20.95■□□□□ 0.94
SMARCB1-201ENST00000263121 SETD9Q8NE22 299 aa20.95■□□□□ 0.94
SMARCB1-201ENST00000263121 FBLIM1Q8WUP2 373 aa20.95■□□□□ 0.94
SMARCB1-201ENST00000263121 TMEM239Q8WW34 195 aa20.95■□□□□ 0.94
SMARCB1-201ENST00000263121 TTC9Q92623 222 aa20.95■□□□□ 0.94
SMARCB1-201ENST00000263121 TMCO6Q96DC7 493 aa20.95■□□□□ 0.94
SMARCB1-201ENST00000263121 ZNF426Q9BUY5 554 aa20.95■□□□□ 0.94
SMARCB1-201ENST00000263121 FBXL4Q9UKA2 621 aa20.95■□□□□ 0.94
SMARCB1-201ENST00000263121 HSPE1-MOB4S4R3N1 261 aa20.95■□□□□ 0.94
SMARCB1-201ENST00000263121 KNTC1P50748 2209 aa20.95■□□□□ 0.94
SMARCB1-201ENST00000263121 CFAP54Q96N23 3096 aa20.94■□□□□ 0.94
SMARCB1-201ENST00000263121 CUL9Q8IWT3 2517 aa20.94■□□□□ 0.94
SMARCB1-201ENST00000263121 SLC30A4O14863 429 aa20.94■□□□□ 0.94
SMARCB1-201ENST00000263121 KLF4O43474 513 aa20.94■□□□□ 0.94
SMARCB1-201ENST00000263121 PIP5K1CO60331 668 aa20.94■□□□□ 0.94
SMARCB1-201ENST00000263121 ANGPTL1O95841 491 aa20.94■□□□□ 0.94
SMARCB1-201ENST00000263121 LINGO3P0C6S8 592 aa20.94■□□□□ 0.94
SMARCB1-201ENST00000263121 GSTM3P21266 225 aa20.94■□□□□ 0.94
SMARCB1-201ENST00000263121 CHMP24386 653 aa20.94■□□□□ 0.94
SMARCB1-201ENST00000263121 CRISP1P54107 249 aa20.94■□□□□ 0.94
SMARCB1-201ENST00000263121 ALG10BQ5I7T1 473 aa20.94■□□□□ 0.94
SMARCB1-201ENST00000263121 TTC33Q6PID6 262 aaPredicted RBP20.94■□□□□ 0.94
SMARCB1-201ENST00000263121 LINC00114Q6XXX2 140 aa20.94■□□□□ 0.94
SMARCB1-201ENST00000263121 ARMC10Q8N2F6 343 aa20.94■□□□□ 0.94
SMARCB1-201ENST00000263121 CADM2Q8N3J6 435 aa20.94■□□□□ 0.94
SMARCB1-201ENST00000263121 NKD1Q969G9 470 aa20.94■□□□□ 0.94
SMARCB1-201ENST00000263121 MPP4Q96JB8 637 aa20.94■□□□□ 0.94
SMARCB1-201ENST00000263121 SCO2O43819 266 aa20.93■□□□□ 0.94
SMARCB1-201ENST00000263121 ICAM2P13598 275 aa20.93■□□□□ 0.94
SMARCB1-201ENST00000263121 RBMS1P29558 406 aaKnown RBP20.93■□□□□ 0.94
SMARCB1-201ENST00000263121 GGT2P36268 569 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms