RNA–Protein interactions for RNA: ENST00000262327.9

LIG3-201, Transcript of DNA ligase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIG3, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-201ENST00000262327 MRPS18AQ9NVS2 196 aaKnown RBP9.35□□□□□ -0.91
LIG3-201ENST00000262327 LOC105369274A0A096LPK9 316 aa9.35□□□□□ -0.91
LIG3-201ENST00000262327 A0A0A6YYJ9 748 aa9.35□□□□□ -0.91
LIG3-201ENST00000262327 RNF13O43567 381 aa9.35□□□□□ -0.91
LIG3-201ENST00000262327 ORC5O43913 435 aa9.35□□□□□ -0.91
LIG3-201ENST00000262327 CLEC3AO75596 197 aa9.35□□□□□ -0.91
LIG3-201ENST00000262327 RPN2P04844 631 aa9.35□□□□□ -0.91
LIG3-201ENST00000262327 ASGR2P07307 311 aa9.35□□□□□ -0.91
LIG3-201ENST00000262327 CD3GP09693 182 aa9.35□□□□□ -0.91
LIG3-201ENST00000262327 ZGLP1P0C6A0 271 aa9.35□□□□□ -0.91
LIG3-201ENST00000262327 NOS3P29474 1203 aa9.35□□□□□ -0.91
LIG3-201ENST00000262327 PRR5P85299 388 aa9.35□□□□□ -0.91
LIG3-201ENST00000262327 ESCO2Q56NI9 601 aa9.35□□□□□ -0.91
LIG3-201ENST00000262327 KIAA1211LQ6NV74 962 aa9.35□□□□□ -0.91
LIG3-201ENST00000262327 WDR88Q6ZMY6 472 aa9.35□□□□□ -0.91
LIG3-201ENST00000262327 ZNF620Q6ZNG0 422 aa9.35□□□□□ -0.91
LIG3-201ENST00000262327 IZUMO1Q8IYV9 350 aa9.35□□□□□ -0.91
LIG3-201ENST00000262327 OR4N4Q8N0Y3 316 aa9.35□□□□□ -0.91
LIG3-201ENST00000262327 SMRP1Q8NCR6 262 aa9.35□□□□□ -0.91
LIG3-201ENST00000262327 C17orf47Q8NEP4 570 aa9.35□□□□□ -0.91
LIG3-201ENST00000262327 OR6C4Q8NGE1 309 aa9.35□□□□□ -0.91
LIG3-201ENST00000262327 OR8H1Q8NGG4 311 aa9.35□□□□□ -0.91
LIG3-201ENST00000262327 OR51L1Q8NGJ5 315 aa9.35□□□□□ -0.91
LIG3-201ENST00000262327 OR51A7Q8NH64 312 aa9.35□□□□□ -0.91
LIG3-201ENST00000262327 LHFPL5Q8TAF8 219 aa9.35□□□□□ -0.91
LIG3-201ENST00000262327 DNAJA4Q8WW22 397 aaPredicted RBP9.35□□□□□ -0.91
LIG3-201ENST00000262327 ACOT11Q8WXI4 607 aaPredicted RBP9.35□□□□□ -0.91
LIG3-201ENST00000262327 RFKQ969G6 155 aa9.35□□□□□ -0.91
LIG3-201ENST00000262327 ORAI1Q96D31 301 aa9.35□□□□□ -0.91
LIG3-201ENST00000262327 ZFP3Q96NJ6 502 aa9.35□□□□□ -0.91
LIG3-201ENST00000262327 THAP7Q9BT49 309 aaPredicted RBP9.35□□□□□ -0.91
LIG3-201ENST00000262327 PLA2G2FQ9BZM2 168 aa9.35□□□□□ -0.91
LIG3-201ENST00000262327 BTBD1Q9H0C5 482 aa9.35□□□□□ -0.91
LIG3-201ENST00000262327 NUDT15Q9NV35 164 aa9.35□□□□□ -0.91
LIG3-201ENST00000262327 WSB2Q9NYS7 404 aaPredicted RBP9.35□□□□□ -0.91
LIG3-201ENST00000262327 TAS2R7Q9NYW3 318 aa9.35□□□□□ -0.91
LIG3-201ENST00000262327 MRPL15Q9P015 296 aaKnown RBP9.35□□□□□ -0.91
LIG3-201ENST00000262327 PCDHGB7Q9Y5F8 929 aa9.35□□□□□ -0.91
LIG3-201ENST00000262327 CDH10Q9Y6N8 788 aa9.35□□□□□ -0.91
LIG3-201ENST00000262327 J3QLW9 94 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 TSPAN4O14817 238 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 EMC8O43402 210 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 NOS1APO75052 506 aaPredicted RBP9.34□□□□□ -0.91
LIG3-201ENST00000262327 F3P13726 295 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 ZNF19P17023 458 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 MAPK14Q16539 360 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 MZT2AQ6P582 158 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 ZC3H14Q6PJT7 736 aaKnown RBP9.34□□□□□ -0.91
LIG3-201ENST00000262327 RD3Q7Z3Z2 195 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 AMIGO1Q86WK6 493 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 TCTE3Q8IZS6 198 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 TMIEQ8NEW7 156 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 OR2T33Q8NG76 320 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 OR4E2Q8NGC2 313 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 OSTF1Q92882 214 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 ABHD1Q96SE0 405 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 OR52D1Q9H346 318 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 KLHL28Q9NXS3 571 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 NOSIPQ9Y314 301 aaKnown RBP9.34□□□□□ -0.91
LIG3-201ENST00000262327 DENND4AQ7Z401 1863 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 CACNA1CQ13936 2221 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 TRAV27A0A087WT01 109 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 A0A1W2PP55 124 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 A0A1W2PRG6 482 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 DAPL1A0PJW8 107 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 GNB5O14775 395 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 CASC3O15234 703 aaKnown RBP9.34□□□□□ -0.91
LIG3-201ENST00000262327 C1QBP02746 253 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 PEPDP12955 493 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 NDUFV2P19404 249 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 MAKP20794 623 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 MPIP34949 423 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 RAB28P51157 221 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 ARHGAP19Q14CB8 494 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 SF3A2Q15428 464 aaKnown RBP9.34□□□□□ -0.91
LIG3-201ENST00000262327 SLC48A1Q6P1K1 146 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 THSD4Q6ZMP0 1018 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 ZNF765Q7L2R6 523 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 ARL14Q8N4G2 192 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 LINC00471Q8N535 108 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 RFLNBQ8N5W9 214 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 ZNF614Q8N883 585 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 DUSP18Q8NEJ0 188 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 GANCQ8TET4 914 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 GCDHQ92947 438 aaPredicted RBP9.34□□□□□ -0.91
LIG3-201ENST00000262327 MARC2Q969Z3 335 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 KIAA1143Q96AT1 154 aaPredicted RBP9.34□□□□□ -0.91
LIG3-201ENST00000262327 MS4A3Q96HJ5 214 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 ARHGDIGQ99819 225 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 ORAI3Q9BRQ5 295 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 MARVELD1Q9BSK0 173 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 SLC6A17Q9H1V8 727 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 ADAP2Q9NPF8 381 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 PRSS16Q9NQE7 514 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 IL20Q9NYY1 176 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 USP36Q9P275 1121 aaKnown RBP9.34□□□□□ -0.91
LIG3-201ENST00000262327 CD207Q9UJ71 328 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 WDR45Q9Y484 360 aa9.34□□□□□ -0.91
LIG3-201ENST00000262327 ARID1BQ8NFD5 2236 aaPredicted RBP9.34□□□□□ -0.92
LIG3-201ENST00000262327 LEUTXA8MZ59 168 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms