RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 KLK11Q9UBX7 282 aa9.44□□□□□ -0.9
PALB2-201ENST00000261584 KLHL21Q9UJP4 597 aa9.44□□□□□ -0.9
PALB2-201ENST00000261584 RWDD3Q9Y3V2 267 aa9.44□□□□□ -0.9
PALB2-201ENST00000261584 MGAMO43451 1857 aa9.44□□□□□ -0.9
PALB2-201ENST00000261584 TRAV18A0A075B6X5 111 aa9.44□□□□□ -0.9
PALB2-201ENST00000261584 IRGMA1A4Y4 181 aa9.44□□□□□ -0.9
PALB2-201ENST00000261584 IDSB3KWA1 339 aa9.44□□□□□ -0.9
PALB2-201ENST00000261584 EEF1E1-BLOC1S5C9J1V9 151 aa9.44□□□□□ -0.9
PALB2-201ENST00000261584 OPN1LWP04000 364 aa9.44□□□□□ -0.9
PALB2-201ENST00000261584 GABRA5P31644 462 aa9.44□□□□□ -0.9
PALB2-201ENST00000261584 GDNFP39905 211 aa9.44□□□□□ -0.9
PALB2-201ENST00000261584 SHC2P98077 582 aa9.44□□□□□ -0.9
PALB2-201ENST00000261584 PGGHGQ32M88 737 aa9.44□□□□□ -0.9
PALB2-201ENST00000261584 TCTE1Q5JU00 501 aa9.44□□□□□ -0.9
PALB2-201ENST00000261584 POMGNT2Q8NAT1 580 aa9.44□□□□□ -0.9
PALB2-201ENST00000261584 OR8D4Q8NGM9 314 aa9.44□□□□□ -0.9
PALB2-201ENST00000261584 UBTD2Q8WUN7 234 aa9.44□□□□□ -0.9
PALB2-201ENST00000261584 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.44□□□□□ -0.9
PALB2-201ENST00000261584 PHPT1Q9NRX4 125 aaPredicted RBP9.44□□□□□ -0.9
PALB2-201ENST00000261584 PLCXD1Q9NUJ7 323 aa9.44□□□□□ -0.9
PALB2-201ENST00000261584 ADAM18Q9Y3Q7 739 aa9.44□□□□□ -0.9
PALB2-201ENST00000261584 AP1M2Q9Y6Q5 423 aa9.44□□□□□ -0.9
PALB2-201ENST00000261584 TET1Q8NFU7 2136 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 C1orf226A1L170 272 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 RNF13O43567 381 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 AIFM1O95831 613 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 F13BP05160 661 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 EPCAMP16422 314 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 PTPN2P17706 415 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 HLA-DMAP28067 261 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 CCR2P41597 374 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 VASPP50552 380 aaPredicted RBP9.43□□□□□ -0.9
PALB2-201ENST00000261584 GMFBP60983 142 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 ASAH1Q13510 395 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 ZNHIT3Q15649 155 aaPredicted RBP9.43□□□□□ -0.9
PALB2-201ENST00000261584 TMEM64Q6YI46 380 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 TSEN54Q7Z6J9 526 aaKnown RBP9.43□□□□□ -0.9
PALB2-201ENST00000261584 ANKRD53Q8N9V6 530 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 DNAJA4Q8WW22 397 aaPredicted RBP9.43□□□□□ -0.9
PALB2-201ENST00000261584 RNF170Q96K19 258 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 ACTR6Q9GZN1 396 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 RANBP3Q9H6Z4 567 aaPredicted RBP9.43□□□□□ -0.9
PALB2-201ENST00000261584 GPN1Q9HCN4 374 aaPredicted RBP9.43□□□□□ -0.9
PALB2-201ENST00000261584 TREM1Q9NP99 234 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 SLC39A1Q9NY26 324 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 DIMT1Q9UNQ2 313 aaKnown RBP9.43□□□□□ -0.9
PALB2-201ENST00000261584 LRRC37AA6NMS7 1700 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 QSER1Q2KHR3 1735 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 TCRBV16S1A1N1A0A5B0 115 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 DCDC2BA2VCK2 349 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 ZNF705EA8MWA4 302 aaPredicted RBP9.43□□□□□ -0.9
PALB2-201ENST00000261584 SLC16A5O15375 505 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 HIST1H2ABP04908 130 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 CTSLP07711 333 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 ZNF806P0C7X5 589 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 OR8G3PP0DMU2 310 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 NAT1P18440 290 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 RPS5P46782 204 aaKnown RBP9.43□□□□□ -0.9
PALB2-201ENST00000261584 GDI2P50395 445 aaKnown RBP9.43□□□□□ -0.9
PALB2-201ENST00000261584 MESP2Q0VG99 397 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 DHCR24Q15392 516 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 ARSKQ6UWY0 536 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 GDPGP1Q6ZNW5 385 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 MSANTD1Q6ZTZ1 278 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 HIST3H2AQ7L7L0 130 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 KIF18BQ86Y91 864 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 THAP3Q8WTV1 239 aaPredicted RBP9.43□□□□□ -0.9
PALB2-201ENST00000261584 HIST1H2ACQ93077 130 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 CAMK1GQ96NX5 476 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 CEP250Q9BV73 2442 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 ZDHHC11BP0C7U3 371 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 MSL3P1P0C860 447 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 ZNF888P0CJ79 500 aaPredicted RBP9.43□□□□□ -0.9
PALB2-201ENST00000261584 CMPK1P30085 196 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 EVX1P49640 407 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 ARL4DP49703 201 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 KCNC3Q14003 757 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 PCGF3Q3KNV8 242 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 GGTA1PQ4G0N0 100 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 RAB12Q6IQ22 244 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 PRR22Q8IZ63 422 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 SPERTQ8NA61 448 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 PRRC1Q96M27 445 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 AMDHD1Q96NU7 426 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 ABHD1Q96SE0 405 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 ELF4Q99607 663 aaPredicted RBP9.43□□□□□ -0.9
PALB2-201ENST00000261584 TMEM43Q9BTV4 400 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 UBQLN3Q9H347 655 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 GSKIPQ9P0R6 139 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 CDH10Q9Y6N8 788 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 ARID2Q68CP9 1835 aa9.43□□□□□ -0.9
PALB2-201ENST00000261584 CDC14CA4D256 554 aa9.42□□□□□ -0.9
PALB2-201ENST00000261584 TOR1AO14656 332 aa9.42□□□□□ -0.9
PALB2-201ENST00000261584 SLCO2B1O94956 709 aa9.42□□□□□ -0.9
PALB2-201ENST00000261584 LIMS3P0CW19 117 aa9.42□□□□□ -0.9
PALB2-201ENST00000261584 LIMS4P0CW20 117 aa9.42□□□□□ -0.9
PALB2-201ENST00000261584 TRHRP34981 398 aaPredicted RBP9.42□□□□□ -0.9
PALB2-201ENST00000261584 PUDPQ08623 228 aa9.42□□□□□ -0.9
PALB2-201ENST00000261584 NDUFA9Q16795 377 aa9.42□□□□□ -0.9
PALB2-201ENST00000261584 TRMT12Q53H54 448 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms