RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 CNIH4Q9P003 139 aa17.4■□□□□ 0.38
TRIM47-201ENST00000254816 PMS2P1A4D2B8 440 aa17.39■□□□□ 0.37
TRIM47-201ENST00000254816 H3BN98 237 aa17.39■□□□□ 0.37
TRIM47-201ENST00000254816 ONECUT2O95948 504 aa17.39■□□□□ 0.37
TRIM47-201ENST00000254816 TP53P04637 393 aaPredicted RBP17.39■□□□□ 0.37
TRIM47-201ENST00000254816 GPR143P51810 404 aa17.39■□□□□ 0.37
TRIM47-201ENST00000254816 HLA-DQA1Q5Y7H0 255 aa17.39■□□□□ 0.37
TRIM47-201ENST00000254816 WDR88Q6ZMY6 472 aa17.39■□□□□ 0.37
TRIM47-201ENST00000254816 CCDC103Q8IW40 242 aa17.39■□□□□ 0.37
TRIM47-201ENST00000254816 GRHL3Q8TE85 626 aa17.39■□□□□ 0.37
TRIM47-201ENST00000254816 METTL21AQ8WXB1 218 aa17.39■□□□□ 0.37
TRIM47-201ENST00000254816 ADOQ96SZ5 270 aa17.39■□□□□ 0.37
TRIM47-201ENST00000254816 PRSS27Q9BQR3 290 aa17.39■□□□□ 0.37
TRIM47-201ENST00000254816 ULBP3Q9BZM4 244 aa17.39■□□□□ 0.37
TRIM47-201ENST00000254816 FBXO8Q9NRD0 319 aa17.39■□□□□ 0.37
TRIM47-201ENST00000254816 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.38■□□□□ 0.37
TRIM47-201ENST00000254816 CBFA2T3O75081 653 aa17.38■□□□□ 0.37
TRIM47-201ENST00000254816 IL33O95760 270 aa17.38■□□□□ 0.37
TRIM47-201ENST00000254816 ETV5P41161 510 aa17.38■□□□□ 0.37
TRIM47-201ENST00000254816 NUDT6P53370 316 aa17.38■□□□□ 0.37
TRIM47-201ENST00000254816 MRPL14Q6P1L8 145 aaKnown RBP17.38■□□□□ 0.37
TRIM47-201ENST00000254816 RRM2BQ7LG56 351 aa17.38■□□□□ 0.37
TRIM47-201ENST00000254816 SLC29A4Q7RTT9 530 aa17.38■□□□□ 0.37
TRIM47-201ENST00000254816 PRSS48Q7RTY5 328 aa17.38■□□□□ 0.37
TRIM47-201ENST00000254816 P2RY8Q86VZ1 359 aa17.38■□□□□ 0.37
TRIM47-201ENST00000254816 P3H2Q8IVL5 708 aa17.38■□□□□ 0.37
TRIM47-201ENST00000254816 C7orf57Q8NEG2 295 aa17.38■□□□□ 0.37
TRIM47-201ENST00000254816 CRB3Q9BUF7 120 aa17.38■□□□□ 0.37
TRIM47-201ENST00000254816 ZNF223Q9UK11 482 aaPredicted RBP17.38■□□□□ 0.37
TRIM47-201ENST00000254816 TRAPPC13A5PLN9 417 aa17.38■□□□□ 0.37
TRIM47-201ENST00000254816 ZAR1LA6NP61 321 aa17.38■□□□□ 0.37
TRIM47-201ENST00000254816 OPRL1P41146 370 aa17.38■□□□□ 0.37
TRIM47-201ENST00000254816 ACAA2P42765 397 aaKnown RBP17.38■□□□□ 0.37
TRIM47-201ENST00000254816 MVKQ03426 396 aa17.38■□□□□ 0.37
TRIM47-201ENST00000254816 SYT6Q5T7P8 510 aaPredicted RBP17.38■□□□□ 0.37
TRIM47-201ENST00000254816 C16orf47Q6ZP98 133 aaPredicted RBP17.38■□□□□ 0.37
TRIM47-201ENST00000254816 NRMQ8IXM6 262 aa17.38■□□□□ 0.37
TRIM47-201ENST00000254816 SVOPQ8N4V2 548 aa17.38■□□□□ 0.37
TRIM47-201ENST00000254816 LINC00471Q8N535 108 aa17.38■□□□□ 0.37
TRIM47-201ENST00000254816 ACOT11Q8WXI4 607 aaPredicted RBP17.38■□□□□ 0.37
TRIM47-201ENST00000254816 MR1Q95460 341 aa17.38■□□□□ 0.37
TRIM47-201ENST00000254816 CCNB1IP1Q9NPC3 277 aa17.38■□□□□ 0.37
TRIM47-201ENST00000254816 TMEM9BQ9NQ34 198 aa17.38■□□□□ 0.37
TRIM47-201ENST00000254816 ZNF226Q9NYT6 803 aa17.38■□□□□ 0.37
TRIM47-201ENST00000254816 TESQ9UGI8 421 aaKnown RBP17.38■□□□□ 0.37
TRIM47-201ENST00000254816 CACNA1HO95180 2353 aa17.38■□□□□ 0.37
TRIM47-201ENST00000254816 SERINC4A6NH21 518 aa17.37■□□□□ 0.37
TRIM47-201ENST00000254816 REM1O75628 298 aa17.37■□□□□ 0.37
TRIM47-201ENST00000254816 LYPD3O95274 346 aa17.37■□□□□ 0.37
TRIM47-201ENST00000254816 CSTAP01040 98 aa17.37■□□□□ 0.37
TRIM47-201ENST00000254816 C21orf33P30042 268 aaPredicted RBP17.37■□□□□ 0.37
TRIM47-201ENST00000254816 CCKBRP32239 447 aa17.37■□□□□ 0.37
TRIM47-201ENST00000254816 TGFBR1P36897 503 aa17.37■□□□□ 0.37
TRIM47-201ENST00000254816 ST13P50502 369 aaKnown RBP17.37■□□□□ 0.37
TRIM47-201ENST00000254816 SLCO6A1Q86UG4 719 aa17.37■□□□□ 0.37
TRIM47-201ENST00000254816 GRAMD2AQ8IUY3 354 aa17.37■□□□□ 0.37
TRIM47-201ENST00000254816 RPL3LQ92901 407 aaKnown RBP17.37■□□□□ 0.37
TRIM47-201ENST00000254816 CMKLR1Q99788 373 aa17.37■□□□□ 0.37
TRIM47-201ENST00000254816 COPS4Q9BT78 406 aa17.37■□□□□ 0.37
TRIM47-201ENST00000254816 DSN1Q9H410 356 aa17.37■□□□□ 0.37
TRIM47-201ENST00000254816 ANKRD19PQ9H560 264 aa17.37■□□□□ 0.37
TRIM47-201ENST00000254816 B3GALT1Q9Y5Z6 326 aa17.37■□□□□ 0.37
TRIM47-201ENST00000254816 SAGE2PA6NJ88 616 aa17.37■□□□□ 0.37
TRIM47-201ENST00000254816 C4orf47A7E2U8 309 aa17.37■□□□□ 0.37
TRIM47-201ENST00000254816 UTS2O95399 124 aa17.37■□□□□ 0.37
TRIM47-201ENST00000254816 GPR4P46093 362 aa17.37■□□□□ 0.37
TRIM47-201ENST00000254816 OMPP47874 163 aa17.37■□□□□ 0.37
TRIM47-201ENST00000254816 PSMD4P55036 377 aaKnown RBP17.37■□□□□ 0.37
TRIM47-201ENST00000254816 NCS1P62166 190 aa17.37■□□□□ 0.37
TRIM47-201ENST00000254816 INSM1Q01101 510 aaPredicted RBP17.37■□□□□ 0.37
TRIM47-201ENST00000254816 ALDH6A1Q02252 535 aaKnown RBP17.37■□□□□ 0.37
TRIM47-201ENST00000254816 ILKQ13418 452 aa17.37■□□□□ 0.37
TRIM47-201ENST00000254816 KLHL26Q53HC5 615 aa17.37■□□□□ 0.37
TRIM47-201ENST00000254816 PAPD4Q6PIY7 484 aaKnown RBP17.37■□□□□ 0.37
TRIM47-201ENST00000254816 APOOLQ6UXV4 268 aa17.37■□□□□ 0.37
TRIM47-201ENST00000254816 APCDD1LQ8NCL9 501 aa17.37■□□□□ 0.37
TRIM47-201ENST00000254816 NFAM1Q8NET5 270 aaPredicted RBP17.37■□□□□ 0.37
TRIM47-201ENST00000254816 B3GNT7Q8NFL0 401 aa17.37■□□□□ 0.37
TRIM47-201ENST00000254816 THAP3Q8WTV1 239 aaPredicted RBP17.37■□□□□ 0.37
TRIM47-201ENST00000254816 WDR77Q9BQA1 342 aaPredicted RBP17.37■□□□□ 0.37
TRIM47-201ENST00000254816 SLC26A1Q9H2B4 701 aa17.37■□□□□ 0.37
TRIM47-201ENST00000254816 EGLN3Q9H6Z9 239 aa17.37■□□□□ 0.37
TRIM47-201ENST00000254816 ENOPH1Q9UHY7 261 aa17.37■□□□□ 0.37
TRIM47-201ENST00000254816 LOXL2Q9Y4K0 774 aa17.37■□□□□ 0.37
TRIM47-201ENST00000254816 EXPH5Q8NEV8 1989 aa17.36■□□□□ 0.37
TRIM47-201ENST00000254816 KLK3P07288 261 aaPredicted RBP17.36■□□□□ 0.37
TRIM47-201ENST00000254816 DCAF7P61962 342 aa17.36■□□□□ 0.37
TRIM47-201ENST00000254816 CD226Q15762 336 aa17.36■□□□□ 0.37
TRIM47-201ENST00000254816 Q6ZNX1 250 aa17.36■□□□□ 0.37
TRIM47-201ENST00000254816 KIF18BQ86Y91 864 aa17.36■□□□□ 0.37
TRIM47-201ENST00000254816 IQCF1Q8N6M8 205 aa17.36■□□□□ 0.37
TRIM47-201ENST00000254816 DRAXINQ8NBI3 349 aaPredicted RBP17.36■□□□□ 0.37
TRIM47-201ENST00000254816 GALNT6Q8NCL4 622 aa17.36■□□□□ 0.37
TRIM47-201ENST00000254816 PIGXQ8TBF5 258 aa17.36■□□□□ 0.37
TRIM47-201ENST00000254816 GNPDA2Q8TDQ7 276 aa17.36■□□□□ 0.37
TRIM47-201ENST00000254816 SNRNP27Q8WVK2 155 aaKnown RBP17.36■□□□□ 0.37
TRIM47-201ENST00000254816 IPCEF1Q8WWN9 437 aaPredicted RBP17.36■□□□□ 0.37
TRIM47-201ENST00000254816 SIGLEC11Q96RL6 698 aa17.36■□□□□ 0.37
TRIM47-201ENST00000254816 ZNF559Q9BR84 538 aa17.36■□□□□ 0.37
TRIM47-201ENST00000254816 GPN3Q9UHW5 284 aaPredicted RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms