RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 IFI30P13284 250 aa15.77■□□□□ 0.12
FOXA1-201ENST00000250448 SLC6A1P30531 599 aa15.77■□□□□ 0.12
FOXA1-201ENST00000250448 RPL6Q02878 288 aaKnown RBP15.77■□□□□ 0.12
FOXA1-201ENST00000250448 ILF3Q12906 894 aaKnown RBP eCLIP15.77■□□□□ 0.12
FOXA1-201ENST00000250448 IDNKQ5T6J7 187 aa15.77■□□□□ 0.12
FOXA1-201ENST00000250448 NDUFAF5Q5TEU4 345 aa15.77■□□□□ 0.12
FOXA1-201ENST00000250448 ZNF322Q6U7Q0 402 aaPredicted RBP15.77■□□□□ 0.12
FOXA1-201ENST00000250448 B3GLCTQ6Y288 498 aa15.77■□□□□ 0.12
FOXA1-201ENST00000250448 RAB42Q8N4Z0 105 aa15.77■□□□□ 0.12
FOXA1-201ENST00000250448 BBS1Q8NFJ9 593 aa15.77■□□□□ 0.12
FOXA1-201ENST00000250448 NR4A3Q92570 626 aa15.77■□□□□ 0.12
FOXA1-201ENST00000250448 DIO2Q92813 273 aa15.77■□□□□ 0.12
FOXA1-201ENST00000250448 BBS4Q96RK4 519 aa15.77■□□□□ 0.12
FOXA1-201ENST00000250448 UBL7Q96S82 380 aaPredicted RBP15.77■□□□□ 0.12
FOXA1-201ENST00000250448 NT5DC2Q9H857 520 aa15.77■□□□□ 0.12
FOXA1-201ENST00000250448 CBLCQ9ULV8 474 aa15.77■□□□□ 0.12
FOXA1-201ENST00000250448 ZDBF2Q9HCK1 2354 aa15.77■□□□□ 0.11
FOXA1-201ENST00000250448 A0A0A6YYD5 115 aa15.77■□□□□ 0.11
FOXA1-201ENST00000250448 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.77■□□□□ 0.11
FOXA1-201ENST00000250448 SPTY2D1-AS1A0A0U1RR47 76 aa15.77■□□□□ 0.11
FOXA1-201ENST00000250448 TNFRSF10CO14798 259 aa15.77■□□□□ 0.11
FOXA1-201ENST00000250448 PPM1DO15297 605 aa15.77■□□□□ 0.11
FOXA1-201ENST00000250448 ZNF217O75362 1048 aa15.77■□□□□ 0.11
FOXA1-201ENST00000250448 PRKRAO75569 313 aaKnown RBP15.77■□□□□ 0.11
FOXA1-201ENST00000250448 PAHP00439 452 aa15.77■□□□□ 0.11
FOXA1-201ENST00000250448 NUDT1P36639 197 aa15.77■□□□□ 0.11
FOXA1-201ENST00000250448 SSR2P43308 183 aa15.77■□□□□ 0.11
FOXA1-201ENST00000250448 TRA2BP62995 288 aaKnown RBP15.77■□□□□ 0.11
FOXA1-201ENST00000250448 PRRT3Q5FWE3 981 aa15.77■□□□□ 0.11
FOXA1-201ENST00000250448 WASH2PQ6VEQ5 465 aa15.77■□□□□ 0.11
FOXA1-201ENST00000250448 TMEM64Q6YI46 380 aa15.77■□□□□ 0.11
FOXA1-201ENST00000250448 RRM2BQ7LG56 351 aa15.77■□□□□ 0.11
FOXA1-201ENST00000250448 TMEFF1Q8IYR6 380 aa15.77■□□□□ 0.11
FOXA1-201ENST00000250448 GJD3Q8N144 294 aa15.77■□□□□ 0.11
FOXA1-201ENST00000250448 OR2L8Q8NGY9 312 aa15.77■□□□□ 0.11
FOXA1-201ENST00000250448 OSTF1Q92882 214 aa15.77■□□□□ 0.11
FOXA1-201ENST00000250448 KLHDC7BQ96G42 594 aa15.77■□□□□ 0.11
FOXA1-201ENST00000250448 ARHGDIGQ99819 225 aa15.77■□□□□ 0.11
FOXA1-201ENST00000250448 TEX12Q9BXU0 123 aa15.77■□□□□ 0.11
FOXA1-201ENST00000250448 SYNPO2LQ9H987 977 aa15.77■□□□□ 0.11
FOXA1-201ENST00000250448 B3GNT2Q9NY97 397 aa15.77■□□□□ 0.11
FOXA1-201ENST00000250448 SLC13A4Q9UKG4 626 aa15.77■□□□□ 0.11
FOXA1-201ENST00000250448 A6NCN8 305 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 GTPBP1O00178 669 aaKnown RBP15.76■□□□□ 0.11
FOXA1-201ENST00000250448 SYT5O00445 386 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 KCNJ13O60928 360 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 TNFP01375 233 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 ALPPL2P10696 532 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 F3P13726 295 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 DRD2P14416 443 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 BCKDHBP21953 392 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 HTR1FP30939 366 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 UQCRC1P31930 480 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 CSNK1G2P78368 415 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 PRDX1Q06830 199 aaKnown RBP15.76■□□□□ 0.11
FOXA1-201ENST00000250448 FCN2Q15485 313 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 PGGHGQ32M88 737 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 PLA1AQ53H76 456 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 ZNF311Q5JNZ3 666 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 FAM205BPQ63HN1 556 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 OR4C11Q6IEV9 310 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 TAF8Q7Z7C8 310 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 AMIGO1Q86WK6 493 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 NR2C2APQ86WQ0 139 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 OR10G6Q8NH81 332 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 SFXN5Q8TD22 340 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 RFT1Q96AA3 541 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 SLC6A20Q9NP91 592 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 ATP13A2Q9NQ11 1180 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 GPR55Q9Y2T6 319 aaPredicted RBP15.76■□□□□ 0.11
FOXA1-201ENST00000250448 ZSCAN5BA6NJL1 495 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 BTN3A3O00478 584 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 CHP2O43745 196 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 LANCL1O43813 399 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 TSC22D2O75157 780 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 HMGN2P05204 90 aaKnown RBP15.76■□□□□ 0.11
FOXA1-201ENST00000250448 GALP22466 123 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 ATP6V1E1P36543 226 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 HSD17B2P37059 387 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 STAT5AP42229 794 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 MTNR1BP49286 362 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 SUZ12Q15022 739 aaKnown RBP15.76■□□□□ 0.11
FOXA1-201ENST00000250448 ANGPT1Q15389 498 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 ESCO2Q56NI9 601 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 ASB18Q6ZVZ8 466 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 GHDCQ8N2G8 530 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 OR5M3Q8NGP4 307 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 HSPA12BQ96MM6 686 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 FCRL4Q96PJ5 515 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 PIGUQ9H490 435 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 MED17Q9NVC6 651 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 PTGFRNQ9P2B2 879 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 KCNE3Q9Y6H6 103 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 COLEC10Q9Y6Z7 277 aa15.76■□□□□ 0.11
FOXA1-201ENST00000250448 A0A0A6YYJ9 748 aa15.75■□□□□ 0.11
FOXA1-201ENST00000250448 FABP7O15540 132 aa15.75■□□□□ 0.11
FOXA1-201ENST00000250448 RNF13O43567 381 aa15.75■□□□□ 0.11
FOXA1-201ENST00000250448 FPR3P25089 353 aa15.75■□□□□ 0.11
FOXA1-201ENST00000250448 IFNA8P32881 189 aa15.75■□□□□ 0.11
FOXA1-201ENST00000250448 ST3GAL3Q11203 375 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms