RNA–Protein interactions for RNA: ENST00000233072.9

CPS1-201, Transcript of carbamoyl-phosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPS1, Length 5,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-201ENST00000233072 SDC1P18827 310 aa6.78□□□□□ -1.32
CPS1-201ENST00000233072 FUT4P22083 530 aa6.78□□□□□ -1.32
CPS1-201ENST00000233072 ADRA1AP35348 466 aa6.78□□□□□ -1.32
CPS1-201ENST00000233072 SGSHP51688 502 aa6.78□□□□□ -1.32
CPS1-201ENST00000233072 RRADP55042 308 aa6.78□□□□□ -1.32
CPS1-201ENST00000233072 SRPXP78539 464 aa6.78□□□□□ -1.32
CPS1-201ENST00000233072 REEP5Q00765 189 aa6.78□□□□□ -1.32
CPS1-201ENST00000233072 PPP1R8Q12972 351 aaKnown RBP6.78□□□□□ -1.32
CPS1-201ENST00000233072 ATXN7L3Q14CW9 347 aaPredicted RBP6.78□□□□□ -1.32
CPS1-201ENST00000233072 PLGLAQ15195 96 aa6.78□□□□□ -1.32
CPS1-201ENST00000233072 C18orf21Q32NC0 220 aaPredicted RBP6.78□□□□□ -1.32
CPS1-201ENST00000233072 YOD1Q5VVQ6 348 aaPredicted RBP6.78□□□□□ -1.32
CPS1-201ENST00000233072 SLX4IPQ5VYV7 408 aa6.78□□□□□ -1.32
CPS1-201ENST00000233072 CCDC71Q8IV32 467 aaPredicted RBP6.78□□□□□ -1.32
CPS1-201ENST00000233072 ACOT4Q8N9L9 421 aa6.78□□□□□ -1.32
CPS1-201ENST00000233072 ZNF610Q8N9Z0 462 aa6.78□□□□□ -1.32
CPS1-201ENST00000233072 FNDC9Q8TBE3 224 aa6.78□□□□□ -1.32
CPS1-201ENST00000233072 SYNPRQ8TBG9 265 aa6.78□□□□□ -1.32
CPS1-201ENST00000233072 LRRC15Q8TF66 581 aa6.78□□□□□ -1.32
CPS1-201ENST00000233072 CDS1Q92903 461 aa6.78□□□□□ -1.32
CPS1-201ENST00000233072 SSX3Q99909 188 aa6.78□□□□□ -1.32
CPS1-201ENST00000233072 LMAN1LQ9HAT1 526 aa6.78□□□□□ -1.32
CPS1-201ENST00000233072 BIN3Q9NQY0 253 aa6.78□□□□□ -1.32
CPS1-201ENST00000233072 UBQLN4Q9NRR5 601 aa6.78□□□□□ -1.32
CPS1-201ENST00000233072 THSD1Q9NS62 852 aa6.78□□□□□ -1.32
CPS1-201ENST00000233072 CUTCQ9NTM9 273 aa6.78□□□□□ -1.32
CPS1-201ENST00000233072 PLEKHJ1Q9NW61 149 aa6.78□□□□□ -1.32
CPS1-201ENST00000233072 TEX10Q9NXF1 929 aaPredicted RBP6.78□□□□□ -1.32
CPS1-201ENST00000233072 LOC105369274A0A096LPK9 316 aa6.78□□□□□ -1.32
CPS1-201ENST00000233072 A0A0A6YYH2 397 aa6.78□□□□□ -1.32
CPS1-201ENST00000233072 TCRBV3S1A0A5B6 114 aa6.78□□□□□ -1.32
CPS1-201ENST00000233072 MROH6A6NGR9 719 aa6.78□□□□□ -1.32
CPS1-201ENST00000233072 A6NJ64 397 aa6.78□□□□□ -1.32
CPS1-201ENST00000233072 METTL15A6NJ78 407 aa6.78□□□□□ -1.32
CPS1-201ENST00000233072 ZNF736B4DX44 427 aaPredicted RBP6.78□□□□□ -1.32
CPS1-201ENST00000233072 IL1AP01583 271 aa6.78□□□□□ -1.32
CPS1-201ENST00000233072 CSF2P04141 144 aa6.78□□□□□ -1.32
CPS1-201ENST00000233072 IL1RNP18510 177 aa6.78□□□□□ -1.32
CPS1-201ENST00000233072 NFYAP23511 347 aaPredicted RBP6.78□□□□□ -1.32
CPS1-201ENST00000233072 AOAHP28039 575 aa6.78□□□□□ -1.32
CPS1-201ENST00000233072 DCTP40126 519 aa6.78□□□□□ -1.32
CPS1-201ENST00000233072 NKX6-1P78426 367 aaPredicted RBP6.78□□□□□ -1.32
CPS1-201ENST00000233072 HES5Q5TA89 166 aa6.78□□□□□ -1.32
CPS1-201ENST00000233072 ANKRD54Q6NXT1 300 aa6.78□□□□□ -1.32
CPS1-201ENST00000233072 PARS2Q7L3T8 475 aaKnown RBP6.78□□□□□ -1.32
CPS1-201ENST00000233072 HSD11B1LQ7Z5J1 315 aa6.78□□□□□ -1.32
CPS1-201ENST00000233072 LRRC28Q86X40 367 aaPredicted RBP6.78□□□□□ -1.32
CPS1-201ENST00000233072 OR4N4Q8N0Y3 316 aa6.78□□□□□ -1.32
CPS1-201ENST00000233072 DCUN1D4Q92564 292 aa6.78□□□□□ -1.32
CPS1-201ENST00000233072 ELP4Q96EB1 424 aa6.78□□□□□ -1.32
CPS1-201ENST00000233072 MICU1Q9BPX6 476 aa6.78□□□□□ -1.32
CPS1-201ENST00000233072 ZNF649Q9BS31 505 aa6.78□□□□□ -1.32
CPS1-201ENST00000233072 LRFN1Q9P244 771 aa6.78□□□□□ -1.32
CPS1-201ENST00000233072 NME7Q9Y5B8 376 aa6.78□□□□□ -1.32
CPS1-201ENST00000233072 PCYT1BQ9Y5K3 369 aaPredicted RBP6.78□□□□□ -1.32
CPS1-201ENST00000233072 TRAV18A0A075B6X5 111 aa6.77□□□□□ -1.32
CPS1-201ENST00000233072 A0A087WUU8 490 aa6.77□□□□□ -1.32
CPS1-201ENST00000233072 TRBV11-1A0A0K0K1C0 115 aa6.77□□□□□ -1.32
CPS1-201ENST00000233072 CLDN24A6NM45 220 aa6.77□□□□□ -1.32
CPS1-201ENST00000233072 EEF1E1-BLOC1S5C9J1V9 151 aa6.77□□□□□ -1.32
CPS1-201ENST00000233072 C17orf112F2Z3M2 114 aa6.77□□□□□ -1.32
CPS1-201ENST00000233072 RAB3DO95716 219 aa6.77□□□□□ -1.32
CPS1-201ENST00000233072 IVDP26440 423 aa6.77□□□□□ -1.32
CPS1-201ENST00000233072 EIF2DP41214 584 aaKnown RBP6.77□□□□□ -1.32
CPS1-201ENST00000233072 TM4SF4P48230 202 aa6.77□□□□□ -1.32
CPS1-201ENST00000233072 PITX1P78337 314 aaPredicted RBP6.77□□□□□ -1.32
CPS1-201ENST00000233072 ADARB1P78563 741 aaKnown RBP6.77□□□□□ -1.32
CPS1-201ENST00000233072 LRRC37A5PQ49AS3 106 aa6.77□□□□□ -1.32
CPS1-201ENST00000233072 PKDCCQ504Y2 493 aa6.77□□□□□ -1.32
CPS1-201ENST00000233072 TMEM184AQ6ZMB5 413 aa6.77□□□□□ -1.32
CPS1-201ENST00000233072 CDHR3Q6ZTQ4 885 aa6.77□□□□□ -1.32
CPS1-201ENST00000233072 RDH10Q8IZV5 341 aa6.77□□□□□ -1.32
CPS1-201ENST00000233072 METTL4Q8N3J2 472 aa6.77□□□□□ -1.32
CPS1-201ENST00000233072 VN1R2Q8NFZ6 395 aa6.77□□□□□ -1.32
CPS1-201ENST00000233072 BTF3L4Q96K17 158 aa6.77□□□□□ -1.32
CPS1-201ENST00000233072 SNX18Q96RF0 628 aa6.77□□□□□ -1.32
CPS1-201ENST00000233072 METTL9Q9H1A3 318 aa6.77□□□□□ -1.32
CPS1-201ENST00000233072 MYOTQ9UBF9 498 aa6.77□□□□□ -1.32
CPS1-201ENST00000233072 EBF1Q9UH73 591 aa6.77□□□□□ -1.32
CPS1-201ENST00000233072 USP3Q9Y6I4 520 aa6.77□□□□□ -1.32
CPS1-201ENST00000233072 H3BSH0 61 aa6.77□□□□□ -1.33
CPS1-201ENST00000233072 H7C1Q1 480 aa6.77□□□□□ -1.33
CPS1-201ENST00000233072 RDH16O75452 317 aa6.77□□□□□ -1.33
CPS1-201ENST00000233072 RFPL3O75679 317 aa6.77□□□□□ -1.33
CPS1-201ENST00000233072 TSPAN15O95858 294 aa6.77□□□□□ -1.33
CPS1-201ENST00000233072 CHRNB4P30926 498 aa6.77□□□□□ -1.33
CPS1-201ENST00000233072 NR4A2P43354 598 aa6.77□□□□□ -1.33
CPS1-201ENST00000233072 NCS1P62166 190 aa6.77□□□□□ -1.33
CPS1-201ENST00000233072 OR7A5Q15622 319 aa6.77□□□□□ -1.33
CPS1-201ENST00000233072 TBCEQ15813 527 aaPredicted RBP6.77□□□□□ -1.33
CPS1-201ENST00000233072 CTSL3PQ5NE16 218 aa6.77□□□□□ -1.33
CPS1-201ENST00000233072 PLCXD3Q63HM9 321 aa6.77□□□□□ -1.33
CPS1-201ENST00000233072 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.77□□□□□ -1.334e-8■■■■■ 33.6
CPS1-201ENST00000233072 OR4N5Q8IXE1 308 aa6.77□□□□□ -1.33
CPS1-201ENST00000233072 OR5D16Q8NGK9 328 aa6.77□□□□□ -1.33
CPS1-201ENST00000233072 C7orf34Q96L11 122 aa6.77□□□□□ -1.33
CPS1-201ENST00000233072 TP63Q9H3D4 680 aaPredicted RBP6.77□□□□□ -1.33
CPS1-201ENST00000233072 TUBB1Q9H4B7 451 aa6.77□□□□□ -1.33
CPS1-201ENST00000233072 A4GALTQ9NPC4 353 aa6.77□□□□□ -1.33
CPS1-201ENST00000233072 REV1Q9UBZ9 1251 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms